{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,29]],"date-time":"2025-10-29T19:25:25Z","timestamp":1761765925049,"version":"3.37.3"},"reference-count":39,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"2","license":[{"start":{"date-parts":[[2016,3,1]],"date-time":"2016-03-01T00:00:00Z","timestamp":1456790400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/USG.html"}],"funder":[{"DOI":"10.13039\/100000001","name":"US National Science Foundation","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000148","name":"ECCS","doi-asserted-by":"publisher","award":["#1001643","#1306630"],"award-info":[{"award-number":["#1001643","#1306630"]}],"id":[{"id":"10.13039\/100000148","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100004917","name":"Cancer Prevention and Research Institute of Texas","doi-asserted-by":"publisher","award":["RP140517"],"award-info":[{"award-number":["RP140517"]}],"id":[{"id":"10.13039\/100004917","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Jonsson Family Graduate Fellowship"},{"DOI":"10.13039\/501100012645","name":"University of Texas at Dallas","doi-asserted-by":"crossref","id":[{"id":"10.13039\/501100012645","id-type":"DOI","asserted-by":"crossref"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE\/ACM Trans. Comput. Biol. and Bioinf."],"published-print":{"date-parts":[[2016,3,1]]},"DOI":"10.1109\/tcbb.2015.2450740","type":"journal-article","created":{"date-parts":[[2015,7,21]],"date-time":"2015-07-21T21:59:21Z","timestamp":1437515961000},"page":"301-314","source":"Crossref","is-referenced-by-count":25,"title":["bLARS: An Algorithm to Infer Gene Regulatory Networks"],"prefix":"10.1109","volume":"13","author":[{"given":"Nitin","family":"Singh","sequence":"first","affiliation":[]},{"given":"Mathukumalli","family":"Vidyasagar","sequence":"additional","affiliation":[]}],"member":"263","reference":[{"doi-asserted-by":"publisher","key":"ref39","DOI":"10.1109\/TAC.2008.928114"},{"doi-asserted-by":"publisher","key":"ref38","DOI":"10.1038\/nmeth.2651"},{"doi-asserted-by":"publisher","key":"ref33","DOI":"10.1111\/j.1467-9868.2010.00740.x"},{"doi-asserted-by":"publisher","key":"ref32","DOI":"10.1214\/10-AOAS377"},{"key":"ref31","doi-asserted-by":"crossref","DOI":"10.1201\/9780429246593","author":"efron","year":"1994","journal-title":"An Introduction to the Bootstrap"},{"key":"ref30","first-page":"1","article-title":"A Sparse-group lasso","author":"simon","year":"2007","journal-title":"ArXiv"},{"key":"ref37","doi-asserted-by":"crossref","DOI":"10.1201\/9781420011432","author":"alon","year":"2006","journal-title":"An Introduction to Systems Biology Design Principles of Biological Circuits"},{"doi-asserted-by":"publisher","key":"ref36","DOI":"10.1093\/bioinformatics\/btr373"},{"doi-asserted-by":"publisher","key":"ref35","DOI":"10.1109\/TPAMI.2011.115"},{"year":"0","key":"ref34"},{"year":"0","key":"ref10"},{"key":"ref11","doi-asserted-by":"crossref","first-page":"407","DOI":"10.1214\/009053604000000067","article-title":"Least angle regression","volume":"32","author":"efron","year":"2004","journal-title":"Ann Statist"},{"key":"ref12","doi-asserted-by":"crossref","first-page":"14863","DOI":"10.1073\/pnas.95.25.14863","article-title":"Cluster analysis and display of Genome-wide expression patterns","volume":"95","author":"michael","year":"1998","journal-title":"Proc Nat Acad Sci United States of America"},{"doi-asserted-by":"publisher","key":"ref13","DOI":"10.2202\/1544-6115.1128"},{"doi-asserted-by":"publisher","key":"ref14","DOI":"10.1186\/1471-2105-9-559"},{"doi-asserted-by":"publisher","key":"ref15","DOI":"10.1142\/9789814447331_0040"},{"doi-asserted-by":"publisher","key":"ref16","DOI":"10.1093\/bioinformatics\/bth448"},{"year":"2006","author":"thomas","journal-title":"Elements of Information Theory (Wiley Series in Telecommunications and Signal Processing","key":"ref17"},{"key":"ref18","doi-asserted-by":"crossref","first-page":"267","DOI":"10.1111\/j.2517-6161.1996.tb02080.x","article-title":"Regression shrinkage and selection via the lasso","volume":"59","author":"tibshirani","year":"1996","journal-title":"J Roy Statist Soc Ser B (Statist Methodol )"},{"doi-asserted-by":"publisher","key":"ref19","DOI":"10.1093\/bioinformatics\/bti816"},{"doi-asserted-by":"publisher","key":"ref28","DOI":"10.1038\/nrg2591"},{"doi-asserted-by":"publisher","key":"ref4","DOI":"10.1186\/1752-0509-6-145"},{"key":"ref27","doi-asserted-by":"crossref","first-page":"65","DOI":"10.1016\/j.plrev.2005.01.001","article-title":"Reverse-engineering transcription control networks","volume":"2","author":"timothy","year":"2005","journal-title":"Phys Life Rev"},{"doi-asserted-by":"publisher","key":"ref3","DOI":"10.1186\/1471-2105-7-S1-S7"},{"key":"ref6","first-page":"711","article-title":"Unsupervised knowledge discovery in medical databases using relevance networks","author":"butte atul","year":"0","journal-title":"Proc AMIA Symp"},{"doi-asserted-by":"publisher","key":"ref29","DOI":"10.1111\/j.1467-9868.2005.00532.x"},{"doi-asserted-by":"publisher","key":"ref5","DOI":"10.1089\/106652700750050961"},{"doi-asserted-by":"publisher","key":"ref8","DOI":"10.1093\/bioinformatics\/bts143"},{"doi-asserted-by":"publisher","key":"ref7","DOI":"10.1371\/journal.pone.0012776"},{"key":"ref2","doi-asserted-by":"crossref","first-page":"8e","DOI":"10.1371\/journal.pbio.0050008","article-title":"Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles","volume":"5","author":"jeremiah","year":"2007","journal-title":"PLoS Biol"},{"doi-asserted-by":"publisher","key":"ref9","DOI":"10.1073\/pnas.0706022104"},{"doi-asserted-by":"publisher","key":"ref1","DOI":"10.1038\/nmeth.2016"},{"key":"ref20","first-page":"434","article-title":"ADANET: Inferring gene regulatory networks using ensemble classifiers","author":"slawek","year":"0","journal-title":"Proc ACM Conf Bioinformatics Computational Biology and Biomedicine"},{"key":"ref22","doi-asserted-by":"crossref","first-page":"78","DOI":"10.1038\/msb4100120","article-title":"How to infer gene networks from expression profiles","volume":"3","author":"bansal","year":"2007","journal-title":"Molecular Syst Biol"},{"doi-asserted-by":"publisher","key":"ref21","DOI":"10.1093\/bioinformatics\/bts619"},{"key":"ref24","doi-asserted-by":"crossref","first-page":"47","DOI":"10.1186\/1752-0509-8-47","article-title":"Fast Bayesian inference for gene regulatory networks using ScanBMA","volume":"8","author":"william","year":"2014","journal-title":"BMC Syst Biol"},{"doi-asserted-by":"publisher","key":"ref23","DOI":"10.1038\/nrm2503"},{"doi-asserted-by":"publisher","key":"ref26","DOI":"10.1093\/bioinformatics\/btu863"},{"doi-asserted-by":"publisher","key":"ref25","DOI":"10.1093\/bioinformatics\/btl003"}],"container-title":["IEEE\/ACM Transactions on Computational Biology and Bioinformatics"],"original-title":[],"link":[{"URL":"http:\/\/ieeexplore.ieee.org\/iel7\/8857\/7445291\/07138615.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8857\/7445291\/07138615.pdf?arnumber=7138615","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,6,10]],"date-time":"2024-06-10T03:35:48Z","timestamp":1717990548000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/7138615\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2016,3,1]]},"references-count":39,"journal-issue":{"issue":"2"},"URL":"https:\/\/doi.org\/10.1109\/tcbb.2015.2450740","relation":{},"ISSN":["1545-5963","1557-9964","2374-0043"],"issn-type":[{"type":"print","value":"1545-5963"},{"type":"electronic","value":"1557-9964"},{"type":"electronic","value":"2374-0043"}],"subject":[],"published":{"date-parts":[[2016,3,1]]}}}