{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,2,21]],"date-time":"2025-02-21T12:23:08Z","timestamp":1740140588341,"version":"3.37.3"},"reference-count":53,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"3","license":[{"start":{"date-parts":[[2018,5,1]],"date-time":"2018-05-01T00:00:00Z","timestamp":1525132800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2018,5,1]],"date-time":"2018-05-01T00:00:00Z","timestamp":1525132800000},"content-version":"am","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2018,5,1]],"date-time":"2018-05-01T00:00:00Z","timestamp":1525132800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2018,5,1]],"date-time":"2018-05-01T00:00:00Z","timestamp":1525132800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"funder":[{"name":"US National Science Foundation","award":["CCF 1421001"],"award-info":[{"award-number":["CCF 1421001"]}]},{"name":"US National Science Foundation","award":["IIS 1144106"],"award-info":[{"award-number":["IIS 1144106"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE\/ACM Trans. Comput. Biol. and Bioinf."],"published-print":{"date-parts":[[2018,5,1]]},"DOI":"10.1109\/tcbb.2016.2628745","type":"journal-article","created":{"date-parts":[[2016,11,16]],"date-time":"2016-11-16T00:02:31Z","timestamp":1479254551000},"page":"719-731","source":"Crossref","is-referenced-by-count":9,"title":["From Optimization to Mapping: An Evolutionary Algorithm for Protein Energy Landscapes"],"prefix":"10.1109","volume":"15","author":[{"given":"Emmanuel","family":"Sapin","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Kenneth A.","family":"De Jong","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-5230-4610","authenticated-orcid":false,"given":"Amarda","family":"Shehu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"263","reference":[{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1021\/bi902153g"},{"key":"ref38","first-page":"2","article-title":"LAPACK: A portable linear algebra library for\n high-performance computers","author":"anderson","year":"0","journal-title":"Proc ACM\/IEEE Conf Supercomputing"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1145\/2739480.2754692"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1145\/2506583.2506706"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-014-0399-6"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/mss097"},{"key":"ref37","doi-asserted-by":"publisher","DOI":"10.1109\/BIBM.2015.7359649"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1004470"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1089\/cmb.2015.0107"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1145\/2649387.2649390"},{"key":"ref28","first-page":"193","article-title":"Principal component analysis: A method for determining the essential dynamics of proteins","author":"david","year":"2013","journal-title":"Protein Dynamics"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1000325"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1016\/j.bpj.2013.07.058"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1007\/0-387-30927-6"},{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1007\/0-306-48332-7"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1038\/nsb1203-980"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1016\/j.ceb.2009.01.022"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1038\/nchembio.232"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1016\/j.sbi.2009.12.004"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1093\/protein\/12.9.713"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1016\/j.str.2008.03.009"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1021\/pr050148n"},{"key":"ref50","doi-asserted-by":"publisher","DOI":"10.1177\/1947601911411084"},{"key":"ref51","doi-asserted-by":"publisher","DOI":"10.1002\/jcc.20084"},{"key":"ref53","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0025711"},{"key":"ref52","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.192453199"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1145\/2506583.2506590"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1002\/(SICI)1096-987X(19981115)19:14<1639::AID-JCC10>3.0.CO;2-B"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1002\/jcc.20624"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1002\/prot.24079"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1089\/cmb.2015.0108"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1186\/1477-5956-11-S1-S6"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1016\/j.jsb.2009.12.028"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1007\/7653_2015_47"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1038\/nature06522"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1004619"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1007\/3-540-45692-9_10"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-642-15844-5_57"},{"key":"ref3","first-page":"161","article-title":"A survey of genetic algorithms for shop scheduling problems","author":"werner","year":"2013","journal-title":"Mathematics and Statistics"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1109\/TNB.2015.2424597"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1007\/s10898-009-9458-3"},{"article-title":"Multi-objective optimization techniques for conformational sampling in template-free protein\n structure prediction","year":"2014","author":"olson","key":"ref8"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1186\/1477-5956-10-S1-S5"},{"key":"ref49","doi-asserted-by":"publisher","DOI":"10.1038\/nrm2438"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1145\/2463372.2463407"},{"key":"ref46","doi-asserted-by":"publisher","DOI":"10.1126\/science.2406906"},{"key":"ref45","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0706349104"},{"key":"ref48","doi-asserted-by":"publisher","DOI":"10.1089\/10665270360688228"},{"key":"ref47","doi-asserted-by":"publisher","DOI":"10.1016\/S0969-2126(00)80021-0"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.96.18.9970"},{"article-title":"Computational structure-based methods to anticipate HIV drug\n resistance evolution and accelerate inhibitor discovery","year":"2008","author":"chang","key":"ref41"},{"key":"ref44","doi-asserted-by":"publisher","DOI":"10.1016\/S0022-2836(03)00271-7"},{"key":"ref43","doi-asserted-by":"publisher","DOI":"10.1016\/j.str.2008.02.017"}],"container-title":["IEEE\/ACM Transactions on Computational Biology and Bioinformatics"],"original-title":[],"link":[{"URL":"https:\/\/ieeexplore.ieee.org\/ielaam\/8857\/8371203\/7744601-aam.pdf","content-type":"application\/pdf","content-version":"am","intended-application":"syndication"},{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8857\/8371203\/07744601.pdf?arnumber=7744601","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,4,8]],"date-time":"2022-04-08T18:51:25Z","timestamp":1649443885000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/7744601\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018,5,1]]},"references-count":53,"journal-issue":{"issue":"3"},"URL":"https:\/\/doi.org\/10.1109\/tcbb.2016.2628745","relation":{},"ISSN":["1545-5963"],"issn-type":[{"type":"print","value":"1545-5963"}],"subject":[],"published":{"date-parts":[[2018,5,1]]}}}