{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,11]],"date-time":"2026-05-11T22:39:43Z","timestamp":1778539183658,"version":"3.51.4"},"reference-count":47,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"6","license":[{"start":{"date-parts":[[2019,11,1]],"date-time":"2019-11-01T00:00:00Z","timestamp":1572566400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2019,11,1]],"date-time":"2019-11-01T00:00:00Z","timestamp":1572566400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2019,11,1]],"date-time":"2019-11-01T00:00:00Z","timestamp":1572566400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"funder":[{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["61772394"],"award-info":[{"award-number":["61772394"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["61502363"],"award-info":[{"award-number":["61502363"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Fundamental Research Funding of Central Universities","award":["JB180304"],"award-info":[{"award-number":["JB180304"]}]},{"name":"Fundamental Research Funding of Central Universities","award":["JB180308"],"award-info":[{"award-number":["JB180308"]}]},{"name":"Natural Science Basic Research Plan in Shaanxi Province of China","award":["2017JM6030"],"award-info":[{"award-number":["2017JM6030"]}]},{"DOI":"10.13039\/501100002942","name":"Central University of Finance and Economics","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100002942","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100002942","name":"Central University of Finance and Economics","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100002942","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE\/ACM Trans. Comput. Biol. and Bioinf."],"published-print":{"date-parts":[[2019,11,1]]},"DOI":"10.1109\/tcbb.2018.2831666","type":"journal-article","created":{"date-parts":[[2018,4,30]],"date-time":"2018-04-30T18:33:40Z","timestamp":1525113220000},"page":"1855-1866","source":"Crossref","is-referenced-by-count":37,"title":["An Integrative Framework for Protein Interaction Network and Methylation Data to Discover Epigenetic Modules"],"prefix":"10.1109","volume":"16","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-5604-7137","authenticated-orcid":false,"given":"Xiaoke","family":"Ma","sequence":"first","affiliation":[{"name":"School of Computer Science and Technology, Xidian University, Xi&#x0027;an, Shaanxi"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-2394-4605","authenticated-orcid":false,"given":"Penggang","family":"Sun","sequence":"additional","affiliation":[{"name":"School of Computer Science and Technology, Xidian University, Xi&#x0027;an, Shaanxi"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3475-6271","authenticated-orcid":false,"given":"Zhong-Yuan","family":"Zhang","sequence":"additional","affiliation":[{"name":"School of Statistics and Mathematics, Central University of Finance and Economics, Beijing"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"263","reference":[{"key":"ref39","article-title":"A package for survival analysis in S. version 2.38","author":"therneau","year":"0"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1088\/1742-5468\/2005\/09\/P09008"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0601602103"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1162\/neco.2007.19.10.2756"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.3390\/molecules23051016"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1016\/j.physa.2017.12.092"},{"key":"ref37","doi-asserted-by":"publisher","DOI":"10.1111\/j.2517-6161.1995.tb02031.x"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkw1102"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1101\/gr.118992.110"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.082099299"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1038\/srep40242"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1038\/srep17386"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1038\/msb4100180"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btu298"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1004332"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-014-0579-8"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1038\/srep01630"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gks725"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1038\/nature11412"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1126\/scitranslmed.aad6352"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btx622"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1109\/TKDE.2017.2657752"},{"key":"ref4","first-page":"766","article-title":"Genome-scale DNA methylation maps of pluripotent and differentiated cells","volume":"454","author":"meissner","year":"2008","journal-title":"Cell"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1016\/j.physa.2009.09.018"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1038\/nature12433"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1016\/j.cell.2008.03.029"},{"key":"ref29","doi-asserted-by":"crossref","first-page":"1548","DOI":"10.1109\/TPAMI.2010.231","article-title":"Graph regularized nonnegative matrix factorization for data Representation","volume":"33","author":"cai","year":"2011","journal-title":"IEEE Trans Pattern Anal Mach Intell"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1038\/nature06745"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1101\/gr.147942.112"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.1533"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1038\/nrg2341"},{"key":"ref9","article-title":"Genome-wide DNA methylation profiles in progression to in situ and invasive carcinoma of the breast with impact on gene transcription and prognosis","volume":"15","author":"fleischer","year":"2014","journal-title":"Genome Biology"},{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1101\/gad.2037511"},{"key":"ref46","doi-asserted-by":"publisher","DOI":"10.1145\/1961189.1961199"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2017.2670558"},{"key":"ref45","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkt1102"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-015-0668-3"},{"key":"ref47","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2016.2625791"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1186\/gb-2013-14-12-r137"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.1038\/nrc.2016.138"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-017-1490-6"},{"key":"ref41","doi-asserted-by":"crossref","first-page":"693","DOI":"10.1038\/nrclinonc.2015.123","article-title":"Precision medicine for metastatic breast cancer","volume":"12","author":"deluche","year":"2015","journal-title":"Nature Reviews Clinical Oncology"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btu316"},{"key":"ref44","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkr988"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1038\/44565"},{"key":"ref43","doi-asserted-by":"publisher","DOI":"10.1038\/75556"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1038\/nrg.2017.86"}],"container-title":["IEEE\/ACM Transactions on Computational Biology and Bioinformatics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8857\/8929069\/08352852.pdf?arnumber=8352852","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,8,1]],"date-time":"2024-08-01T18:42:43Z","timestamp":1722537763000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/8352852\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2019,11,1]]},"references-count":47,"journal-issue":{"issue":"6"},"URL":"https:\/\/doi.org\/10.1109\/tcbb.2018.2831666","relation":{},"ISSN":["1545-5963","1557-9964","2374-0043"],"issn-type":[{"value":"1545-5963","type":"print"},{"value":"1557-9964","type":"electronic"},{"value":"2374-0043","type":"electronic"}],"subject":[],"published":{"date-parts":[[2019,11,1]]}}}