{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,12,31]],"date-time":"2025-12-31T20:07:21Z","timestamp":1767211641021,"version":"3.37.3"},"reference-count":49,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"3","license":[{"start":{"date-parts":[[2021,5,1]],"date-time":"2021-05-01T00:00:00Z","timestamp":1619827200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"}],"funder":[{"DOI":"10.13039\/501100003725","name":"National Research Foundation of Korea","doi-asserted-by":"publisher","award":["NRF-2017M3C4A7065887"],"award-info":[{"award-number":["NRF-2017M3C4A7065887"]}],"id":[{"id":"10.13039\/501100003725","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001321","name":"National Research Foundation","doi-asserted-by":"publisher","award":["NRF-2014M3C9A3063541"],"award-info":[{"award-number":["NRF-2014M3C9A3063541"]}],"id":[{"id":"10.13039\/501100001321","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100003710","name":"Korea Health Industry Development Institute","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100003710","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Ministry of Health & Welfare, Republic of Korea","award":["HI15C3224"],"award-info":[{"award-number":["HI15C3224"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE\/ACM Trans. Comput. Biol. and Bioinf."],"published-print":{"date-parts":[[2021,5,1]]},"DOI":"10.1109\/tcbb.2019.2938949","type":"journal-article","created":{"date-parts":[[2019,9,3]],"date-time":"2019-09-03T19:21:08Z","timestamp":1567538468000},"page":"1174-1183","source":"Crossref","is-referenced-by-count":2,"title":["Ranked k-Spectrum Kernel for Comparative and Evolutionary Comparison of Exons, Introns, and CpG Islands"],"prefix":"10.1109","volume":"18","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-7398-9580","authenticated-orcid":false,"given":"Sangseon","family":"Lee","sequence":"first","affiliation":[]},{"given":"Taeheon","family":"Lee","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6372-9267","authenticated-orcid":false,"given":"Yung-Kyun","family":"Noh","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0001-5385-9546","authenticated-orcid":false,"given":"Sun","family":"Kim","sequence":"additional","affiliation":[]}],"member":"263","reference":[{"doi-asserted-by":"publisher","key":"ref39","DOI":"10.1038\/s41467-018-04964-5"},{"doi-asserted-by":"publisher","key":"ref38","DOI":"10.1093\/nar\/gks1005"},{"doi-asserted-by":"publisher","key":"ref33","DOI":"10.1089\/cmb.2006.13.336"},{"doi-asserted-by":"publisher","key":"ref32","DOI":"10.1093\/biostatistics\/kxu056"},{"doi-asserted-by":"publisher","key":"ref31","DOI":"10.1016\/j.neunet.2005.07.010"},{"key":"ref30","first-page":"905","article-title":"Covariance kernels from Bayesian generative models","author":"seeger","year":"2002","journal-title":"Proc Int Conf Neural Inf Process"},{"doi-asserted-by":"publisher","key":"ref37","DOI":"10.1261\/rna.041913.113"},{"doi-asserted-by":"publisher","key":"ref36","DOI":"10.1093\/nar\/gkt144"},{"doi-asserted-by":"publisher","key":"ref35","DOI":"10.1007\/s10208-013-9173-9"},{"doi-asserted-by":"publisher","key":"ref34","DOI":"10.1093\/bioinformatics\/bth141"},{"doi-asserted-by":"publisher","key":"ref28","DOI":"10.1186\/s12859-017-1560-9"},{"doi-asserted-by":"publisher","key":"ref27","DOI":"10.1093\/bib\/bbt067"},{"doi-asserted-by":"publisher","key":"ref29","DOI":"10.1186\/s12859-017-1795-5"},{"doi-asserted-by":"publisher","key":"ref2","DOI":"10.1016\/0022-2836(81)90087-5"},{"doi-asserted-by":"publisher","key":"ref1","DOI":"10.1017\/CBO9780511790492"},{"doi-asserted-by":"publisher","key":"ref20","DOI":"10.1142\/9789812799623_0053"},{"key":"ref22","first-page":"585","article-title":"Fast kernels for string and tree matching","author":"smola","year":"2003","journal-title":"Proc Int Conf Neural Inf Process"},{"doi-asserted-by":"publisher","key":"ref21","DOI":"10.1093\/bioinformatics\/btg431"},{"doi-asserted-by":"publisher","key":"ref24","DOI":"10.1371\/journal.pcbi.1000173"},{"doi-asserted-by":"publisher","key":"ref23","DOI":"10.1093\/bioinformatics\/bti1053"},{"doi-asserted-by":"publisher","key":"ref26","DOI":"10.2202\/1544-6115.1447"},{"doi-asserted-by":"publisher","key":"ref25","DOI":"10.1371\/journal.pcbi.1005727"},{"doi-asserted-by":"publisher","key":"ref10","DOI":"10.1093\/bib\/bbu005"},{"doi-asserted-by":"publisher","key":"ref11","DOI":"10.1093\/bib\/bbt052"},{"key":"ref40","first-page":"406","article-title":"The neighbor-joining method: A new method for reconstructing phylogenetic trees","volume":"4","author":"saitou","year":"1987","journal-title":"Mol Biol Evol"},{"doi-asserted-by":"publisher","key":"ref12","DOI":"10.1073\/pnas.83.14.5155"},{"doi-asserted-by":"publisher","key":"ref13","DOI":"10.1093\/bioinformatics\/18.1.100"},{"doi-asserted-by":"publisher","key":"ref14","DOI":"10.1111\/j.0006-341X.2001.00441.x"},{"doi-asserted-by":"publisher","key":"ref15","DOI":"10.1016\/j.ygeno.2017.11.003"},{"doi-asserted-by":"publisher","key":"ref16","DOI":"10.1089\/cmb.2015.0216"},{"key":"ref17","first-page":"39","article-title":"Dynamic alignment kernels","author":"watkins","year":"1999","journal-title":"Advances Neural Inf Process Syst"},{"year":"1999","author":"haussler","article-title":"Convolution kernels on discrete structures","key":"ref18"},{"key":"ref19","first-page":"419","article-title":"Text classification using string kernels","volume":"2","author":"lodhi","year":"2002","journal-title":"J Mach Learn Res"},{"doi-asserted-by":"publisher","key":"ref4","DOI":"10.1038\/ng0393-266"},{"doi-asserted-by":"publisher","key":"ref3","DOI":"10.1006\/jmbi.1990.9999"},{"doi-asserted-by":"publisher","key":"ref6","DOI":"10.1101\/gr.1642804"},{"doi-asserted-by":"publisher","key":"ref5","DOI":"10.1093\/bioinformatics\/bti125"},{"doi-asserted-by":"publisher","key":"ref8","DOI":"10.1093\/bioinformatics\/btg005"},{"doi-asserted-by":"publisher","key":"ref7","DOI":"10.1101\/gr.130468.111"},{"key":"ref49","article-title":"The common marmoset genome provides insight into primate biology and evolution","volume":"46","author":"sequencing","year":"2014","journal-title":"Nature Genetics"},{"key":"ref9","first-page":"107","article-title":"Biological sequence analysis by vector-valued functions: Revisiting alignment-free methodologies for DNA and protein classification","volume":"71","author":"vinga","year":"2007","journal-title":"Advanced Computational Methods for Biocomputing and Bioimaging"},{"doi-asserted-by":"publisher","key":"ref46","DOI":"10.1093\/molbev\/msw080"},{"doi-asserted-by":"publisher","key":"ref45","DOI":"10.1093\/bioinformatics\/btm404"},{"doi-asserted-by":"publisher","key":"ref48","DOI":"10.1210\/en.2006-0824"},{"doi-asserted-by":"publisher","key":"ref47","DOI":"10.1101\/gr.6761107"},{"doi-asserted-by":"publisher","key":"ref42","DOI":"10.1371\/journal.pone.0038654"},{"doi-asserted-by":"publisher","key":"ref41","DOI":"10.1101\/gr.229102"},{"doi-asserted-by":"publisher","key":"ref44","DOI":"10.1038\/s41598-018-35926-y"},{"doi-asserted-by":"publisher","key":"ref43","DOI":"10.1371\/journal.pone.0072038"}],"container-title":["IEEE\/ACM Transactions on Computational Biology and Bioinformatics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8857\/9446661\/08823008.pdf?arnumber=8823008","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,1,27]],"date-time":"2022-01-27T12:23:58Z","timestamp":1643286238000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/8823008\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2021,5,1]]},"references-count":49,"journal-issue":{"issue":"3"},"URL":"https:\/\/doi.org\/10.1109\/tcbb.2019.2938949","relation":{},"ISSN":["1545-5963","1557-9964","2374-0043"],"issn-type":[{"type":"print","value":"1545-5963"},{"type":"electronic","value":"1557-9964"},{"type":"electronic","value":"2374-0043"}],"subject":[],"published":{"date-parts":[[2021,5,1]]}}}