{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,12,20]],"date-time":"2025-12-20T22:10:59Z","timestamp":1766268659931,"version":"3.37.3"},"reference-count":31,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"4","license":[{"start":{"date-parts":[[2021,7,1]],"date-time":"2021-07-01T00:00:00Z","timestamp":1625097600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"}],"funder":[{"name":"School of Engineering"},{"name":"Genetic Medicine"},{"name":"EPSRC PRiME project","award":["EP\/K034448\/1"],"award-info":[{"award-number":["EP\/K034448\/1"]}]},{"name":"Royal Society Exchange project","award":["IE161183"],"award-info":[{"award-number":["IE161183"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE\/ACM Trans. Comput. Biol. and Bioinf."],"published-print":{"date-parts":[[2021,7,1]]},"DOI":"10.1109\/tcbb.2019.2943856","type":"journal-article","created":{"date-parts":[[2019,9,26]],"date-time":"2019-09-26T20:22:26Z","timestamp":1569529346000},"page":"1426-1438","source":"Crossref","is-referenced-by-count":5,"title":["CORAL: Verification-Aware OpenCL Based Read Mapper for Heterogeneous Systems"],"prefix":"10.1109","volume":"18","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-9665-5698","authenticated-orcid":false,"given":"Sidharth","family":"Maheshwari","sequence":"first","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6476-7222","authenticated-orcid":false,"given":"Venkateshwarlu Y.","family":"Gudur","sequence":"additional","affiliation":[]},{"given":"Rishad","family":"Shafik","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6893-2873","authenticated-orcid":false,"given":"Ian","family":"Wilson","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0826-9330","authenticated-orcid":false,"given":"Alex","family":"Yakovlev","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-5636-0676","authenticated-orcid":false,"given":"Amit","family":"Acharyya","sequence":"additional","affiliation":[]}],"member":"263","reference":[{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1186\/s12864-018-4460-0"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btx342"},{"year":"2018","author":"khronos","key":"ref10"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1109\/SFCS.2000.892127"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1137\/0222058"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1145\/316542.316550"},{"key":"ref14","first-page":"29","article-title":"A bit-vector algorithm for computing levenshtein and damerau edit distances","volume":"10","author":"hyyr\u00f6","year":"2003","journal-title":"Nordic J Comput"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1109\/ICCD.2015.7357105"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1109\/InPar.2012.6339595"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1109\/TCAD.2018.2857042"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1145\/3126548"},{"article-title":"Approximate string matching for high-throughput sequencing","year":"2015","author":"siragusa","key":"ref19"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-12-210"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1145\/2788396"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1101\/gr.229102"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1186\/gm178"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bts505"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1109\/HPCA.2019.00050"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.2221"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-018-2094-5"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1109\/ICDE.2016.7498238"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1146\/annurev-genom-090413-025358"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1109\/MDAT.2013.2293757"},{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pbio.1002195"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp698"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv670"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.1923"},{"article-title":"A block-sorting lossless data compression algorithm","year":"1994","author":"burrows","key":"ref24"},{"journal-title":"OpenCL in Action How to Accelerate Graphics and Computations","year":"2011","author":"scarpino","key":"ref23"},{"article-title":"Mason–a read simulator for second generation sequencing data","year":"2010","author":"holtgrewe","key":"ref26"},{"year":"2014","author":"langmead","key":"ref25"}],"container-title":["IEEE\/ACM Transactions on Computational Biology and Bioinformatics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8857\/9508625\/08850065.pdf?arnumber=8850065","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,1,12]],"date-time":"2022-01-12T11:37:41Z","timestamp":1641987461000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/8850065\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2021,7,1]]},"references-count":31,"journal-issue":{"issue":"4"},"URL":"https:\/\/doi.org\/10.1109\/tcbb.2019.2943856","relation":{},"ISSN":["1545-5963","1557-9964","2374-0043"],"issn-type":[{"type":"print","value":"1545-5963"},{"type":"electronic","value":"1557-9964"},{"type":"electronic","value":"2374-0043"}],"subject":[],"published":{"date-parts":[[2021,7,1]]}}}