{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,15]],"date-time":"2026-07-15T12:11:51Z","timestamp":1784117511254,"version":"3.55.0"},"reference-count":57,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"3","license":[{"start":{"date-parts":[[2022,5,1]],"date-time":"2022-05-01T00:00:00Z","timestamp":1651363200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2022,5,1]],"date-time":"2022-05-01T00:00:00Z","timestamp":1651363200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2022,5,1]],"date-time":"2022-05-01T00:00:00Z","timestamp":1651363200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"funder":[{"name":"CNPq\/Brazil"},{"name":"CAPES Finance"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE\/ACM Trans. Comput. Biol. and Bioinf."],"published-print":{"date-parts":[[2022,5,1]]},"DOI":"10.1109\/tcbb.2021.3054738","type":"journal-article","created":{"date-parts":[[2021,1,26]],"date-time":"2021-01-26T20:46:17Z","timestamp":1611693977000},"page":"1615-1626","source":"Crossref","is-referenced-by-count":30,"title":["EPGAT: Gene Essentiality Prediction With Graph Attention Networks"],"prefix":"10.1109","volume":"19","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6794-7758","authenticated-orcid":false,"given":"Jo\u00e3o","family":"Schapke","sequence":"first","affiliation":[{"name":"Institute of Informatics, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-8530-6468","authenticated-orcid":false,"given":"Anderson","family":"Tavares","sequence":"additional","affiliation":[{"name":"Institute of Informatics, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-2800-1032","authenticated-orcid":false,"given":"Mariana","family":"Recamonde-Mendoza","sequence":"additional","affiliation":[{"name":"Institute of Informatics, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"263","reference":[{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1016\/j.tcb.2011.07.005"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1146\/annurev.genom.1.1.99"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1039\/C3MB70440H"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1016\/j.ygeno.2008.08.001"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1038\/nrg.2017.74"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbz017"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.0020088"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1038\/35075138"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1016\/j.compbiolchem.2011.04.002"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2011.147"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.3389\/fphys.2016.00075"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-8-262"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1016\/j.bbadis.2018.02.010"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2013.2295318"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0130743"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2018.2889978"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2015.2394487"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2014.2338317"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkq784"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1109\/TST.2012.6374366"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-016-1115-5"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1016\/j.knosys.2018.03.027"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btx055"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2164-7-265"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-10-290"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2019.2897679"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1145\/2939672.2939754"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-019-3076-y"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1008229"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1109\/IJCNN.2005.1555942"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1109\/TNN.2008.2005605"},{"key":"ref32","article-title":"Semi-supervised classification with graph convolutional networks","author":"Kipf"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btaa921"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-030-30493-5_60"},{"key":"ref35","first-page":"1","article-title":"Graph attention networks","volume-title":"Proc. Int. Conf. Learn. Representations","author":"Veli\u010dkovi\u0107"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.1126\/science.285.5429.901"},{"key":"ref37","doi-asserted-by":"publisher","DOI":"10.1038\/msb4100050"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkw1013"},{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkh086"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gky1079"},{"key":"ref41","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gky1131"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gks1193"},{"key":"ref43","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkp148"},{"key":"ref44","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.02767-12"},{"key":"ref45","doi-asserted-by":"publisher","DOI":"10.1126\/science.1120499"},{"key":"ref46","doi-asserted-by":"publisher","DOI":"10.1109\/BIBM.2016.7822501"},{"key":"ref47","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-017-01027-z"},{"key":"ref48","doi-asserted-by":"publisher","DOI":"10.1155\/2015\/835624"},{"key":"ref49","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gku1203"},{"key":"ref50","doi-asserted-by":"publisher","DOI":"10.1093\/database\/bau012"},{"key":"ref51","first-page":"5998","article-title":"Attention is all you need","volume-title":"Proc. Int. Conf. Neural Inf. Process. Syst.","author":"Vaswani"},{"key":"ref52","doi-asserted-by":"publisher","DOI":"10.1145\/3292500.3330701"},{"issue":"1","key":"ref53","first-page":"1929","article-title":"Dropout: A simple way to prevent neural networks from overfitting","volume":"15","author":"Srivastava","year":"2014","journal-title":"J. Mach. Learn. Res."},{"key":"ref54","first-page":"2825","article-title":"Scikit-learn: Machine learning in Python","volume":"12","author":"Pedregosa","year":"2011","journal-title":"J. Mach. Learn. Res."},{"key":"ref55","doi-asserted-by":"publisher","DOI":"10.1017\/9781108924238.008"},{"key":"ref56","article-title":"Fast graph representation learning with pytorch geometric","author":"Fey","year":"2019"},{"key":"ref57","doi-asserted-by":"publisher","DOI":"10.1016\/j.ymeth.2016.07.005"}],"container-title":["IEEE\/ACM Transactions on Computational Biology and Bioinformatics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8857\/9788107\/09336285.pdf?arnumber=9336285","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,7,31]],"date-time":"2024-07-31T20:26:24Z","timestamp":1722457584000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/9336285\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2022,5,1]]},"references-count":57,"journal-issue":{"issue":"3"},"URL":"https:\/\/doi.org\/10.1109\/tcbb.2021.3054738","relation":{},"ISSN":["1545-5963","1557-9964","2374-0043"],"issn-type":[{"value":"1545-5963","type":"print"},{"value":"1557-9964","type":"electronic"},{"value":"2374-0043","type":"electronic"}],"subject":[],"published":{"date-parts":[[2022,5,1]]}}}