{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,5]],"date-time":"2026-04-05T09:30:35Z","timestamp":1775381435430,"version":"3.50.1"},"reference-count":45,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"6","license":[{"start":{"date-parts":[[2021,11,1]],"date-time":"2021-11-01T00:00:00Z","timestamp":1635724800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2021,11,1]],"date-time":"2021-11-01T00:00:00Z","timestamp":1635724800000},"content-version":"am","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"}],"funder":[{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["R01HL093195"],"award-info":[{"award-number":["R01HL093195"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["R21CA178513"],"award-info":[{"award-number":["R21CA178513"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100010390","name":"Saint Louis University","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100010390","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100007812","name":"University of Washington","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100007812","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE\/ACM Trans. Comput. Biol. and Bioinf."],"published-print":{"date-parts":[[2021,11,1]]},"DOI":"10.1109\/tcbb.2021.3078128","type":"journal-article","created":{"date-parts":[[2021,5,7]],"date-time":"2021-05-07T22:03:10Z","timestamp":1620424990000},"page":"2109-2122","source":"Crossref","is-referenced-by-count":12,"title":["Computational Modeling of Gene-Specific Transcriptional Repression, Activation and Chromatin Interactions in Leukemogenesis by LASSO-Regularized Logistic Regression"],"prefix":"10.1109","volume":"18","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-7966-7005","authenticated-orcid":false,"given":"Nickolas","family":"Steinauer","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Kevin","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Chun","family":"Guo","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-8798-7316","authenticated-orcid":false,"given":"Jinsong","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"263","reference":[{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1002\/gepi.22194"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1186\/s12863-017-0495-5"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1074\/jbc.RA119.010707"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.3519"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1074\/jbc.RA119.010707"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1111\/j.1467-9868.2011.00771.x"},{"key":"ref37","doi-asserted-by":"publisher","DOI":"10.4137\/CIN.S17686"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.1001\/jama.2016.7653"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1101\/gr.204834.116"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1016\/j.molcel.2010.05.004"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1002\/j.1460-2075.1993.tb05933.x"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2020.2965934"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkt855"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1182\/bloodadvances.2018028514"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1126\/science.1097937"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1126\/science.1201662"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1038\/sj.onc.1207674"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1128\/MCB.18.12.7176"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkx291"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1101\/gr.139360.112"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.9758\/cpn.2017.15.1.47"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.3389\/fgene.2019.00120"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1038\/nrm1680"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1101\/gr.196006.115"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1016\/j.cell.2005.04.031"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1038\/sj.onc.1207122"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1101\/gr.226530.117"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1038\/sj.onc.1209591"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0073409"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.4161\/cc.9.22.13927"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1016\/j.mrfmmm.2013.07.002"},{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1101\/gad.1424806"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1006\/bbrc.2000.2422"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-11-396"},{"key":"ref45","doi-asserted-by":"publisher","DOI":"10.3390\/genes10030240"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1101\/gr.085449.108"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.30699\/ijp.2017.27990"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.1186\/1753-6561-8-S5-S7"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-019-1924-8"},{"key":"ref41","doi-asserted-by":"publisher","DOI":"10.1038\/s41576-019-0128-0"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1016\/j.csbj.2019.06.012"},{"key":"ref44","doi-asserted-by":"publisher","DOI":"10.1186\/1752-0509-8-S3-S1"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1038\/s41592-018-0303-9"},{"key":"ref43","doi-asserted-by":"publisher","DOI":"10.1016\/j.compbiolchem.2019.04.010"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-019-2994-z"}],"container-title":["IEEE\/ACM Transactions on Computational Biology and Bioinformatics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8857\/9642421\/09425592.pdf?arnumber=9425592","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,3,8]],"date-time":"2022-03-08T21:25:38Z","timestamp":1646774738000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/9425592\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2021,11,1]]},"references-count":45,"journal-issue":{"issue":"6"},"URL":"https:\/\/doi.org\/10.1109\/tcbb.2021.3078128","relation":{},"ISSN":["1545-5963","1557-9964","2374-0043"],"issn-type":[{"value":"1545-5963","type":"print"},{"value":"1557-9964","type":"electronic"},{"value":"2374-0043","type":"electronic"}],"subject":[],"published":{"date-parts":[[2021,11,1]]}}}