{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,2,6]],"date-time":"2026-02-06T23:06:14Z","timestamp":1770419174533,"version":"3.49.0"},"reference-count":59,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"3","license":[{"start":{"date-parts":[[2023,5,1]],"date-time":"2023-05-01T00:00:00Z","timestamp":1682899200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2023,5,1]],"date-time":"2023-05-01T00:00:00Z","timestamp":1682899200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2023,5,1]],"date-time":"2023-05-01T00:00:00Z","timestamp":1682899200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE\/ACM Trans. Comput. Biol. and Bioinf."],"published-print":{"date-parts":[[2023,5,1]]},"DOI":"10.1109\/tcbb.2022.3225675","type":"journal-article","created":{"date-parts":[[2022,12,1]],"date-time":"2022-12-01T00:21:40Z","timestamp":1669854100000},"page":"1971-1982","source":"Crossref","is-referenced-by-count":9,"title":["Global Optimization Approach for Parameter Estimation in Stochastic Dynamic Models of Biosystems"],"prefix":"10.1109","volume":"20","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-6530-6807","authenticated-orcid":false,"given":"Carlos","family":"Sequeiros","sequence":"first","affiliation":[{"name":"Computational Biology Lab, MBG-CSIC, Spanish National Research Council, Pontevedra, Spain"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Irene","family":"Otero-Muras","sequence":"additional","affiliation":[{"name":"Instituto de Biolog&#x00ED;a Integrativa de Sistemas (I2SysBio), CSIC-Universitat de Val&#x00E8;ncia, Paterna, Val\u00e8ncia, Spain"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Carlos","family":"V\u00e1zquez","sequence":"additional","affiliation":[{"name":"Department of Mathematics and CITIC, Universidade da Coru&#x00F1;a, A Coru&#x00F1;a, Spain"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4245-0320","authenticated-orcid":false,"given":"Julio R.","family":"Banga","sequence":"additional","affiliation":[{"name":"Computational Biology Lab, MBG-CSIC, Spanish National Research Council, Pontevedra, Spain"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"263","reference":[{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1101\/gad.1945410"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1016\/j.copbio.2018.02.005"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1111\/j.1742-4658.2008.06844.x"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1016\/j.ymben.2014.03.007"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bty736"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1016\/j.cels.2018.10.013"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1016\/j.csbj.2014.10.003"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1201\/9781351000918"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1016\/0378-4371(92)90283-V"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1098\/rsif.2018.0943"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1098\/rsif.2018.0967"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1005030"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1008264"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btaa397"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-11-414"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-13-68"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1016\/0021-9991(76)90041-3"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1146\/annurev.physchem.58.032806.104637"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1016\/j.jtbi.2017.03.017"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btx645"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1021\/jp806431b"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1016\/j.nahs.2007.11.009"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1049\/ip-syb:20050105"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-4419-9863-7_278"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevLett.97.168302"},{"key":"ref26","volume-title":"Using OpenMP: Portable Shared Memory Parallel Programming","volume":"10","author":"Chapman","year":"2008"},{"key":"ref27","volume-title":"CUDA by Example: An Introduction to General-Purpose GPU Programming","author":"Sanders","year":"2010"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1142\/S0218202518500495"},{"key":"ref29","article-title":"Parameter inference for stochastic biological models","author":"Revell","year":"2019"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1214\/aoms\/1177729694"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/14.10.869"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-4419-5762-7"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1109\/ICCA.2013.6565206"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2017.2773083"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1021\/ie990486w"},{"key":"ref36","volume-title":"Stochastic Global Optimization","volume":"9","author":"Zhigljavsky","year":"2007"},{"key":"ref37","doi-asserted-by":"publisher","DOI":"10.1017\/S0962492904000194"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1101\/gr.1262503"},{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-4613-0251-3_3"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2011.63"},{"key":"ref41","doi-asserted-by":"publisher","DOI":"10.1186\/s12918-015-0219-2"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.1016\/j.amc.2019.02.040"},{"key":"ref43","doi-asserted-by":"publisher","DOI":"10.1016\/j.cor.2009.05.003"},{"key":"ref44","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-016-1452-4"},{"key":"ref45","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btl552"},{"key":"ref46","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-319-99429-1_9"},{"key":"ref47","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-4757-4321-0"},{"key":"ref48","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-59745-525-1_2"},{"key":"ref49","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv759"},{"key":"ref50","article-title":"MEIGO: An open-source software suite based on metaheuristics for global optimization in systems biology and bioinformatics","volume-title":"BMC Bioinf.","volume":"15","author":"Egea","year":"2014"},{"key":"ref51","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-319-93025-1_4"},{"key":"ref52","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0027755"},{"key":"ref53","doi-asserted-by":"publisher","DOI":"10.1016\/j.coisb.2021.03.005"},{"key":"ref54","doi-asserted-by":"publisher","DOI":"10.1098\/rsif.2018.0530"},{"key":"ref55","doi-asserted-by":"publisher","DOI":"10.3390\/pr6090136"},{"key":"ref56","doi-asserted-by":"publisher","DOI":"10.1098\/rsif.2020.0652"},{"key":"ref57","article-title":"Genetic algorithm (GA) optmization","author":"Pron","year":"2022"},{"key":"ref58","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.092133899"},{"key":"ref59","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1005220"}],"container-title":["IEEE\/ACM Transactions on Computational Biology and Bioinformatics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8857\/10144451\/09966812.pdf?arnumber=9966812","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,5,18]],"date-time":"2024-05-18T04:23:02Z","timestamp":1716006182000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/9966812\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2023,5,1]]},"references-count":59,"journal-issue":{"issue":"3"},"URL":"https:\/\/doi.org\/10.1109\/tcbb.2022.3225675","relation":{},"ISSN":["1545-5963","1557-9964","2374-0043"],"issn-type":[{"value":"1545-5963","type":"print"},{"value":"1557-9964","type":"electronic"},{"value":"2374-0043","type":"electronic"}],"subject":[],"published":{"date-parts":[[2023,5,1]]}}}