{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,1,16]],"date-time":"2026-01-16T02:09:31Z","timestamp":1768529371895,"version":"3.49.0"},"reference-count":34,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"2","license":[{"start":{"date-parts":[[2025,3,1]],"date-time":"2025-03-01T00:00:00Z","timestamp":1740787200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2025,3,1]],"date-time":"2025-03-01T00:00:00Z","timestamp":1740787200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2025,3,1]],"date-time":"2025-03-01T00:00:00Z","timestamp":1740787200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"funder":[{"name":"JST CREST","award":["JPMJCR16G3"],"award-info":[{"award-number":["JPMJCR16G3"]}]},{"name":"JST CREST","award":["JPMJCR21N6"],"award-info":[{"award-number":["JPMJCR21N6"]}]},{"DOI":"10.13039\/100009619","name":"Japan Agency for Medical Research and Development","doi-asserted-by":"publisher","award":["JP21bm0404073"],"award-info":[{"award-number":["JP21bm0404073"]}],"id":[{"id":"10.13039\/100009619","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100009619","name":"Japan Agency for Medical Research and Development","doi-asserted-by":"publisher","award":["JP20cm0106474"],"award-info":[{"award-number":["JP20cm0106474"]}],"id":[{"id":"10.13039\/100009619","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100009619","name":"Japan Agency for Medical Research and Development","doi-asserted-by":"publisher","award":["JP21fk0210093"],"award-info":[{"award-number":["JP21fk0210093"]}],"id":[{"id":"10.13039\/100009619","id-type":"DOI","asserted-by":"publisher"}]},{"name":"RIKEN BDR and All-RIKEN Research Project"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE Trans. Comput. Biol. Bioinform."],"published-print":{"date-parts":[[2025,3]]},"DOI":"10.1109\/tcbbio.2025.3526707","type":"journal-article","created":{"date-parts":[[2025,1,7]],"date-time":"2025-01-07T19:23:31Z","timestamp":1736277811000},"page":"570-580","source":"Crossref","is-referenced-by-count":1,"title":["The Effect of Multi-Task Learning on the Prediction of Neoantigen\u2013MHC Class II Binding"],"prefix":"10.1109","volume":"22","author":[{"ORCID":"https:\/\/orcid.org\/0009-0003-2803-0930","authenticated-orcid":false,"given":"Kazuhiro","family":"Ikkyu","sequence":"first","affiliation":[{"name":"Systems and Information Engineering, Graduate School of Science and Technology, University of Tsukuba, Tsukuba, Japan"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-7261-2570","authenticated-orcid":false,"given":"Itoshi","family":"Nikaido","sequence":"additional","affiliation":[{"name":"Systems and Information Engineering, Graduate School of Science and Technology, University of Tsukuba, Tsukuba, Japan"}]}],"member":"263","reference":[{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1038\/nature12477"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.3389\/fonc.2022.1054231"},{"key":"ref3","article-title":"NEPdb","author":"Zhou","year":"2021"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1080\/14760584.2022.2012456"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv639"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.4049\/jimmunol.167.12.6939"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1111\/imm.12889"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btaa479"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btac225"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1158\/2326-6066.CIR-19-0464"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1023\/A:1007379606734"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.18653\/v1\/P19-1441"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1142\/9789813235533_0018"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gku938"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0141287"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1038\/nature23003"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1016\/j.jim.2011.07.007"},{"key":"ref18","article-title":"Efficient estimation of word representations in vector space","volume-title":"Proc. Int. Conf. Learn. Representations","author":"Mikolov"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1038\/371250a0"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1016\/j.csbj.2021.05.039"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btaa013"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-019-3220-8"},{"key":"ref23","volume-title":"Proceedings of the 27th International Conference On Machine Learning (ICML-10)","author":"Nair","year":"2010"},{"key":"ref24","article-title":"Keras-multi-head","year":"2022"},{"key":"ref25","volume-title":"Deep Learning","author":"Goodfellow","year":"2016"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.48550\/ARXIV.1706.03762"},{"key":"ref27","article-title":"Recurrent batch normalization","volume-title":"Proc. Int. Conf. Learn. Representations","author":"Cooijmans","year":"2016"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.2016239118"},{"issue":"10","key":"ref29","first-page":"7112","article-title":"Recurrent batch normalization","volume":"44","author":"Cooijmans","year":"2022","journal-title":"IEEE Trans. Pattern Anal. Mach. Intell."},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btab422"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btz330"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1186\/s12943-019-1055-6"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.3389\/fimmu.2019.02559"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1145\/3663363"}],"container-title":["IEEE Transactions on Computational Biology and Bioinformatics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx8\/10723156\/10953288\/10829974.pdf?arnumber=10829974","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,4,8]],"date-time":"2025-04-08T17:21:53Z","timestamp":1744132913000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/10829974\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,3]]},"references-count":34,"journal-issue":{"issue":"2"},"URL":"https:\/\/doi.org\/10.1109\/tcbbio.2025.3526707","relation":{},"ISSN":["2998-4165"],"issn-type":[{"value":"2998-4165","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025,3]]}}}