{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,24]],"date-time":"2026-03-24T19:07:33Z","timestamp":1774379253489,"version":"3.50.1"},"reference-count":52,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"2","license":[{"start":{"date-parts":[[2025,3,1]],"date-time":"2025-03-01T00:00:00Z","timestamp":1740787200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2025,3,1]],"date-time":"2025-03-01T00:00:00Z","timestamp":1740787200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2025,3,1]],"date-time":"2025-03-01T00:00:00Z","timestamp":1740787200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"funder":[{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["62362004"],"award-info":[{"award-number":["62362004"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["61862006"],"award-info":[{"award-number":["61862006"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100004607","name":"Natural Science Foundation of Guangxi Province","doi-asserted-by":"publisher","award":["2020GXNSFAA159074"],"award-info":[{"award-number":["2020GXNSFAA159074"]}],"id":[{"id":"10.13039\/501100004607","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE Trans. Comput. Biol. Bioinform."],"published-print":{"date-parts":[[2025,3]]},"DOI":"10.1109\/tcbbio.2025.3532256","type":"journal-article","created":{"date-parts":[[2025,1,21]],"date-time":"2025-01-21T18:24:31Z","timestamp":1737483871000},"page":"672-683","source":"Crossref","is-referenced-by-count":5,"title":["SMDPG: Identifying Metabolite-Disease Associations via Optimized Negative Sampling and Sparse Graph Convolutional Network"],"prefix":"10.1109","volume":"22","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6289-8766","authenticated-orcid":false,"given":"Yiran","family":"Huang","sequence":"first","affiliation":[{"name":"School of Computer, Electronics and Information, Guangxi University, Nanning, China"}]},{"ORCID":"https:\/\/orcid.org\/0009-0003-5332-5781","authenticated-orcid":false,"given":"Qiulong","family":"Pu","sequence":"additional","affiliation":[{"name":"School of Computer, Electronics and Information, Guangxi University, Nanning, China"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-5839-7504","authenticated-orcid":false,"given":"Wei","family":"Lan","sequence":"additional","affiliation":[{"name":"School of Computer, Electronics and Information, Guangxi University, Nanning, China"}]},{"ORCID":"https:\/\/orcid.org\/0009-0009-8220-9281","authenticated-orcid":false,"given":"Cuiyu","family":"Huang","sequence":"additional","affiliation":[{"name":"College of Chemistry, Nankai University, Tianjin, China"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-5560-2151","authenticated-orcid":false,"given":"Cheng","family":"Zhong","sequence":"additional","affiliation":[{"name":"School of Computer, Electronics and Information, Guangxi University, Nanning, China"}]}],"member":"263","reference":[{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1038\/nrm3314"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbx103"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbz055"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1093\/database\/baaa094"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkn810"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkab1062"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2023.3234331"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2023.3284505"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbac463"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbac527"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1111\/jcmm.17889"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1016\/j.ymeth.2023.11.014"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1016\/j.compbiomed.2023.107414"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1016\/j.compbiomed.2023.106733"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-018-2098-1"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0225380"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.3389\/fmolb.2020.603121"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.26599\/TST.2021.9010003"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btab652"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbaa212"},{"key":"ref21","article-title":"Semi-supervised classification with graph convolutional networks","author":"Kipf","year":"2016"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbac266"},{"key":"ref23","article-title":"Graph attention networks","author":"Velickovic","year":"2017"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbac423"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbad259"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkab1063"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkac833"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btu684"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv416"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2021.3065562"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1155\/2020\/9342640"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btq064"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bty503"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1016\/j.matpr.2021.03.061"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1186\/s40649-019-0069-y"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.1109\/ICCV.2017.324"},{"key":"ref37","article-title":"Adam: A method for stochastic optimization","author":"Kingma","year":"2014"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1016\/j.eswa.2022.117938"},{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbae168"},{"key":"ref40","article-title":"Evaluation: From precision, recall and F-measure to ROC, informedness, markedness and correlation","author":"Powers","year":"2020"},{"key":"ref41","doi-asserted-by":"publisher","DOI":"10.1016\/j.compbiolchem.2024.108036"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.1155\/2015\/183624"},{"key":"ref43","doi-asserted-by":"publisher","DOI":"10.3945\/jn.111.147751"},{"key":"ref44","doi-asserted-by":"publisher","DOI":"10.1016\/bs.pmbts.2016.09.008"},{"key":"ref45","doi-asserted-by":"publisher","DOI":"10.1016\/j.ccell.2016.12.006"},{"key":"ref46","doi-asserted-by":"publisher","DOI":"10.1016\/j.clinbiochem.2012.05.012"},{"key":"ref47","doi-asserted-by":"publisher","DOI":"10.1007\/s11306-009-0178-y"},{"key":"ref48","doi-asserted-by":"publisher","DOI":"10.1016\/j.disamonth.2017.07.001"},{"issue":"11","key":"ref49","first-page":"661","article-title":"Crohn\u2019s disease: Diagnosis and management","volume":"98","author":"Veauthier","year":"2018","journal-title":"Amer. Fam. Physician"},{"key":"ref50","doi-asserted-by":"publisher","DOI":"10.1097\/MIB.0b013e31829a91f6"},{"key":"ref51","doi-asserted-by":"publisher","DOI":"10.1136\/gutjnl-2013-306423"},{"key":"ref52","doi-asserted-by":"publisher","DOI":"10.1093\/ecco-jcc\/jjw158"}],"container-title":["IEEE Transactions on Computational Biology and Bioinformatics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx8\/10723156\/10953288\/10848279.pdf?arnumber=10848279","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,4,8]],"date-time":"2025-04-08T17:22:01Z","timestamp":1744132921000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/10848279\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,3]]},"references-count":52,"journal-issue":{"issue":"2"},"URL":"https:\/\/doi.org\/10.1109\/tcbbio.2025.3532256","relation":{},"ISSN":["2998-4165"],"issn-type":[{"value":"2998-4165","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025,3]]}}}