{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,12,11]],"date-time":"2025-12-11T18:57:57Z","timestamp":1765479477114,"version":"3.48.0"},"reference-count":61,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"6","license":[{"start":{"date-parts":[[2025,11,1]],"date-time":"2025-11-01T00:00:00Z","timestamp":1761955200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2025,11,1]],"date-time":"2025-11-01T00:00:00Z","timestamp":1761955200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2025,11,1]],"date-time":"2025-11-01T00:00:00Z","timestamp":1761955200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"funder":[{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["62225209"],"award-info":[{"award-number":["62225209"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"name":"High-Performance Computing Center of Central South University"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE Trans. Comput. Biol. Bioinform."],"published-print":{"date-parts":[[2025,11]]},"DOI":"10.1109\/tcbbio.2025.3613657","type":"journal-article","created":{"date-parts":[[2025,9,23]],"date-time":"2025-09-23T17:24:48Z","timestamp":1758648288000},"page":"3101-3111","source":"Crossref","is-referenced-by-count":0,"title":["DISHIC: An Effective Method for Identifying Differential Interaction in Single-Cell Hi-C"],"prefix":"10.1109","volume":"22","author":[{"given":"Yichao","family":"Zhao","sequence":"first","affiliation":[{"name":"School of Computer Science and Engineering, Central South University, Changsha, China"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6372-6798","authenticated-orcid":false,"given":"Ruiqing","family":"Zheng","sequence":"additional","affiliation":[{"name":"School of Computer Science and Engineering, Central South University, Changsha, China"}]},{"given":"Li","family":"Tang","sequence":"additional","affiliation":[{"name":"School of Computer Science and Engineering, Central South University, Changsha, China"}]},{"given":"Pengzhen","family":"Jia","sequence":"additional","affiliation":[{"name":"School of Computer Science and Engineering, Central South University, Changsha, China"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0188-1394","authenticated-orcid":false,"given":"Min","family":"Li","sequence":"additional","affiliation":[{"name":"School of Computer Science and Engineering, Central South University, Changsha, China"}]}],"member":"263","reference":[{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1038\/s41576-018-0060-8"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1038\/s41580-021-00362-w"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkae029"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1109\/JBHI.2023.3292299"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1126\/science.1181369"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1038\/nature23001"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1038\/nature12593"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1038\/nprot.2015.127"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1038\/s41587-021-00998-1"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1038\/s41576-023-00638-1"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btad625"},{"key":"ref12","article-title":"Benchmarking analysis of scHi-C data imputation methods","author":"Xuyan","year":"2025","journal-title":"Big Data Mining Analytics"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btac575"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1126\/science.adg3797"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1038\/s41592-019-0502-z"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1038\/nrm.2016.138"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1016\/j.semcdb.2018.07.005"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbad315"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1038\/s41592-021-01231-2"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btac838"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbad475"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-017-02554-5"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.2931"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1038\/nature21711"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1038\/s41592-021-01060-3"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btx747"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1007\/s00401-009-0619-8"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1038\/nrn.2016.159"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1126\/science.1190927"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1007\/s12264-021-00675-y"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-017-11103-5"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1016\/j.neuron.2022.03.008"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1101\/gr.264606.120"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1038\/s41588-024-01745-3"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1038\/s41592-024-02239-0"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.1038\/s41594-023-01066-9"},{"key":"ref37","doi-asserted-by":"publisher","DOI":"10.1016\/j.isci.2022.105687"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1093\/bfgp\/ely002"},{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gks501"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkad925"},{"key":"ref41","doi-asserted-by":"publisher","DOI":"10.1109\/BIBM62325.2024.10822576"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbae101"},{"key":"ref43","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkv007"},{"key":"ref44","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btac757"},{"key":"ref45","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkaa1113"},{"key":"ref46","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkw1092"},{"key":"ref47","doi-asserted-by":"publisher","DOI":"10.1016\/j.bbrc.2020.03.092"},{"key":"ref48","doi-asserted-by":"publisher","DOI":"10.1523\/JNEUROSCI.4178-07.2008"},{"key":"ref49","doi-asserted-by":"publisher","DOI":"10.15252\/embr.201846635"},{"key":"ref50","doi-asserted-by":"publisher","DOI":"10.1038\/ng1966"},{"key":"ref51","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1016071107"},{"key":"ref52","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkad408"},{"key":"ref53","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp616"},{"key":"ref54","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkac238"},{"key":"ref55","doi-asserted-by":"publisher","DOI":"10.1016\/j.celrep.2018.12.044"},{"key":"ref56","doi-asserted-by":"publisher","DOI":"10.1016\/j.celrep.2021.109229"},{"key":"ref57","doi-asserted-by":"publisher","DOI":"10.1016\/j.neuron.2017.09.026"},{"key":"ref58","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkac947"},{"key":"ref59","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkac968"},{"key":"ref60","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbae083"},{"key":"ref61","doi-asserted-by":"publisher","DOI":"10.1109\/BIBM62325.2024.10821719"}],"container-title":["IEEE Transactions on Computational Biology and Bioinformatics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx8\/10723156\/11296745\/11176833.pdf?arnumber=11176833","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,12,11]],"date-time":"2025-12-11T18:44:57Z","timestamp":1765478697000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/11176833\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,11]]},"references-count":61,"journal-issue":{"issue":"6"},"URL":"https:\/\/doi.org\/10.1109\/tcbbio.2025.3613657","relation":{},"ISSN":["2998-4165"],"issn-type":[{"type":"electronic","value":"2998-4165"}],"subject":[],"published":{"date-parts":[[2025,11]]}}}