{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,6]],"date-time":"2026-04-06T20:51:27Z","timestamp":1775508687491,"version":"3.50.1"},"reference-count":55,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"2","license":[{"start":{"date-parts":[[2026,3,1]],"date-time":"2026-03-01T00:00:00Z","timestamp":1772323200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2026,3,1]],"date-time":"2026-03-01T00:00:00Z","timestamp":1772323200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2026,3,1]],"date-time":"2026-03-01T00:00:00Z","timestamp":1772323200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"funder":[{"name":"National Key R&amp;D Program of China","award":["2023YFD1300400"],"award-info":[{"award-number":["2023YFD1300400"]}]},{"name":"National Key R&amp;D Program of China","award":["2022YFF1001200"],"award-info":[{"award-number":["2022YFF1001200"]}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["61972322"],"award-info":[{"award-number":["61972322"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Shaanxi Livestock and Poultry Breeding Double Chain Fusion Key Project","award":["2022GD-TSLD-46-0401"],"award-info":[{"award-number":["2022GD-TSLD-46-0401"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE Trans. Comput. Biol. Bioinform."],"published-print":{"date-parts":[[2026,3]]},"DOI":"10.1109\/tcbbio.2026.3663364","type":"journal-article","created":{"date-parts":[[2026,2,10]],"date-time":"2026-02-10T21:04:34Z","timestamp":1770757474000},"page":"853-862","source":"Crossref","is-referenced-by-count":0,"title":["AGEP_TWAS: A Deep Learning-Based Framework for Predicting Gene Expression Levels in Tissues"],"prefix":"10.1109","volume":"23","author":[{"given":"Sizhe","family":"Wang","sequence":"first","affiliation":[{"name":"College of Information Engineering, Northwest A and F University, Yangling, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zhichao","family":"Zhou","sequence":"additional","affiliation":[{"name":"College of Information Engineering, Northwest A and F University, Yangling, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1847-754X","authenticated-orcid":false,"given":"Chen","family":"Li","sequence":"additional","affiliation":[{"name":"Department of Biochemistry and Molecular Biology, Monash University, Melbourne, VIC, Australia"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yudong","family":"Cai","sequence":"additional","affiliation":[{"name":"College of Animal Science and Technology, Northwest A&amp;F University, Yangling, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jiong","family":"Wang","sequence":"additional","affiliation":[{"name":"College of Animal Science and Technology, Northwest A&amp;F University, Yangling, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zhuangbiao","family":"Zhang","sequence":"additional","affiliation":[{"name":"College of Animal Science and Technology, Northwest A&amp;F University, Yangling, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ran","family":"Li","sequence":"additional","affiliation":[{"name":"College of Animal Science and Technology, Northwest A&amp;F University, Yangling, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zhannur","family":"Niyazbekova","sequence":"additional","affiliation":[{"name":"Reference Center for Safety and Quality of Agricultural Products, Kazakh National Agrarian Research University, Almaty, Kazakhstan"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4821-3585","authenticated-orcid":false,"given":"Yu","family":"Jiang","sequence":"additional","affiliation":[{"name":"Reference Center for Safety and Quality of Agricultural Products, Kazakh National Agrarian Research University, Almaty, Kazakhstan"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6217-6285","authenticated-orcid":false,"given":"Quanzhong","family":"Liu","sequence":"additional","affiliation":[{"name":"College of Information Engineering, Northwest A and F University, Yangling, China"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"263","reference":[{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1109\/jbhi.2023.3264029"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.4634"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1016\/j.xplc.2024.101010"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1152\/physiolgenomics.00120.2023"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1038\/s41398-023-02390-w"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-015-0852-1"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1038\/ng.3506"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1038\/ng.3367"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1038\/s41588-019-0345-7"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1142\/9789813235533_0041"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-024-44935-7"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1038\/s41588-022-01153-5"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.17219\/acem\/127031"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1126\/science.1262110"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1186\/s12920-015-0152-7"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1126\/science.aad9417"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1016\/j.cels.2017.11.001"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1016\/j.cell.2017.10.049"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1186\/s12864-017-4226-0"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.3389\/fgene.2019.01077"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1007\/s13258-021-01128-6"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btw074"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1142\/s0219720019500227"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bty563"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0243915"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0281286"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-021-03972-5"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1109\/CVPR.2017.243"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1016\/s0893-6080(97)00118-4"},{"key":"ref30","volume-title":"Deep Compression: Compressing Deep Neural Networks With Pruning, Trained Quantization and Huffman Coding","author":"Song","year":"2016"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gks1193"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1109\/jbhi.2019.2896144"},{"key":"ref33","doi-asserted-by":"crossref","DOI":"10.1101\/2025.07.28.667120","article-title":"Genomic regions and variant analysis reveal candidate genes associated with age at first service in Chinese Holstein heifers","author":"Pan","year":"2025"},{"key":"ref34","article-title":"Cost-effective genomic prediction for fertility traits: A comparison of machine learning and conventional models using low-coverage sequencing in Holstein heifers","author":"Zhang","year":"2025","journal-title":"bioRxiv"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btaa239"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.3389\/fgene.2022.1081842"},{"key":"ref37","doi-asserted-by":"publisher","DOI":"10.1038\/s41592-024-02201-0"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1038\/s41586-024-08391-z"},{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1109\/tpami.2023.3307688"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkaa881"},{"key":"ref41","volume-title":"Learning Both Weights and Connections for Efficient Neural Networks","author":"Song","year":"2015"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btad271"},{"key":"ref43","doi-asserted-by":"publisher","DOI":"10.1109\/cvpr.2019.00279"},{"key":"ref44","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btac454"},{"key":"ref45","doi-asserted-by":"publisher","DOI":"10.1142\/9789811250477_0033"},{"key":"ref46","doi-asserted-by":"publisher","DOI":"10.3389\/fgene.2019.00261"},{"key":"ref47","doi-asserted-by":"publisher","DOI":"10.1111\/opo.12131"},{"key":"ref48","doi-asserted-by":"publisher","DOI":"10.1038\/srep21194"},{"key":"ref49","doi-asserted-by":"publisher","DOI":"10.3168\/jds.2020-20101"},{"key":"ref50","doi-asserted-by":"publisher","DOI":"10.3390\/blsf2022010003"},{"key":"ref51","doi-asserted-by":"publisher","DOI":"10.1038\/s42003-024-05764-y"},{"key":"ref52","doi-asserted-by":"publisher","DOI":"10.1186\/s12711-019-0473-7"},{"key":"ref53","doi-asserted-by":"publisher","DOI":"10.3168\/jds.2020-19826"},{"key":"ref54","doi-asserted-by":"publisher","DOI":"10.1038\/s41588-025-02155-9"},{"key":"ref55","doi-asserted-by":"publisher","DOI":"10.1038\/s41588-023-01585-7"}],"container-title":["IEEE Transactions on Computational Biology and Bioinformatics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx8\/10723156\/11474684\/11389135.pdf?arnumber=11389135","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,4,6]],"date-time":"2026-04-06T19:55:24Z","timestamp":1775505324000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/11389135\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,3]]},"references-count":55,"journal-issue":{"issue":"2"},"URL":"https:\/\/doi.org\/10.1109\/tcbbio.2026.3663364","relation":{},"ISSN":["2998-4165"],"issn-type":[{"value":"2998-4165","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,3]]}}}