{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,26]],"date-time":"2026-08-26T15:52:31Z","timestamp":1787759551846,"version":"build-2784847793"},"reference-count":38,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"4","license":[{"start":{"date-parts":[[2018,4,1]],"date-time":"2018-04-01T00:00:00Z","timestamp":1522540800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2018,4,1]],"date-time":"2018-04-01T00:00:00Z","timestamp":1522540800000},"content-version":"am","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2018,4,1]],"date-time":"2018-04-01T00:00:00Z","timestamp":1522540800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2018,4,1]],"date-time":"2018-04-01T00:00:00Z","timestamp":1522540800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"funder":[{"DOI":"10.13039\/100000001","name":"NSF","doi-asserted-by":"publisher","award":["1423271"],"award-info":[{"award-number":["1423271"]}],"id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000001","name":"NSF","doi-asserted-by":"publisher","award":["1705077"],"award-info":[{"award-number":["1705077"]}],"id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000001","name":"NSF Career Award","doi-asserted-by":"publisher","award":["1651236"],"award-info":[{"award-number":["1651236"]}],"id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000001","name":"NSF","doi-asserted-by":"publisher","award":["1703403"],"award-info":[{"award-number":["1703403"]}],"id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE Trans. Inform. Theory"],"published-print":{"date-parts":[[2018,4]]},"DOI":"10.1109\/tit.2018.2809001","type":"journal-article","created":{"date-parts":[[2018,2,23]],"date-time":"2018-02-23T14:42:20Z","timestamp":1519396940000},"page":"3216-3236","source":"Crossref","is-referenced-by-count":57,"title":["Models and Information-Theoretic Bounds for Nanopore Sequencing"],"prefix":"10.1109","volume":"64","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-6345-2667","authenticated-orcid":false,"given":"Wei","family":"Mao","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Suhas N.","family":"Diggavi","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sreeram","family":"Kannan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"263","reference":[{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1109\/ISIT.2016.7541609"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1109\/TIT.2006.881832"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-4757-3982-4"},{"key":"ref31","author":"kemeny","year":"1976","journal-title":"Denumerable Markov Chains With a Chapter of Markov Random Fields by David Griffeath"},{"key":"ref30","doi-asserted-by":"crossref","DOI":"10.1007\/978-1-4612-5775-2","volume":"79","author":"walters","year":"1982","journal-title":"An Introduction to Ergodic Theory"},{"key":"ref37","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-15-S9-S4"},{"key":"ref36","first-page":"39230","article-title":"Shannon: An information-optimal de novo RNA-seq assembler","author":"kannan","year":"2016","journal-title":"BioRxiv"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1109\/TIT.2008.920243"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1109\/ITW.2001.955166"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1038\/nbt0412-295"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1186\/s13742-016-0137-2"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1186\/s13073-015-0220-9"},{"key":"ref13","first-page":"61556","article-title":"Democratizing DNA fingerprinting","author":"zaaijer","year":"2016","journal-title":"BioRxiv"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1038\/ncomms11307"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.3290"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1038\/nrmicro3548"},{"key":"ref17","first-page":"11","article-title":"Shannon’s theorems for channels with synchronization errors","volume":"3","author":"dobrushin","year":"1967","journal-title":"Problems Inf Transmiss"},{"key":"ref18","article-title":"Sequential decoding for binary channels with noise and synchronization errors","author":"gallager","year":"1961"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1109\/TIT.2005.864445"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1109\/ISIT.2017.8006971"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.3423"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1109\/ISIT.2006.261808"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1126\/science.1155174"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.1495"},{"key":"ref29","author":"cover","year":"2006","journal-title":"Elements of Information Theory"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.93.24.13770"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btw569"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.2950"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1016\/j.neuron.2011.09.010"},{"key":"ref9","author":"bo\u017ea","year":"2016","journal-title":"DeepNano Deep Recurrent Neural Networks for Base Calling in MinION Nanopore Reads"},{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1038\/nature08494"},{"key":"ref20","first-page":"573","article-title":"On transmission over deletion channels","volume":"39","author":"diggavi","year":"2001","journal-title":"Proc Annu Allerton Conf Commun Control Comput"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1109\/TMBMC.2016.2630056"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1109\/TIT.2012.2191682"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.2171"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1109\/ISIT.2007.4557469"},{"key":"ref26","author":"gallager","year":"1968","journal-title":"Information Theory and Reliable Communication"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1109\/ISIT.2009.5206015"}],"container-title":["IEEE Transactions on Information Theory"],"original-title":[],"link":[{"URL":"http:\/\/ieeexplore.ieee.org\/ielaam\/18\/8318411\/8301564-aam.pdf","content-type":"application\/pdf","content-version":"am","intended-application":"syndication"},{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/18\/8318411\/08301564.pdf?arnumber=8301564","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,4,8]],"date-time":"2022-04-08T14:55:23Z","timestamp":1649429723000},"score":1,"resource":{"primary":{"URL":"http:\/\/ieeexplore.ieee.org\/document\/8301564\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018,4]]},"references-count":38,"journal-issue":{"issue":"4"},"URL":"https:\/\/doi.org\/10.1109\/tit.2018.2809001","relation":{},"ISSN":["0018-9448","1557-9654"],"issn-type":[{"value":"0018-9448","type":"print"},{"value":"1557-9654","type":"electronic"}],"subject":[],"published":{"date-parts":[[2018,4]]}}}