{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,12,29]],"date-time":"2025-12-29T22:07:28Z","timestamp":1767046048100,"version":"3.37.3"},"reference-count":56,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"11","license":[{"start":{"date-parts":[[2022,11,1]],"date-time":"2022-11-01T00:00:00Z","timestamp":1667260800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2022,11,1]],"date-time":"2022-11-01T00:00:00Z","timestamp":1667260800000},"content-version":"am","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2022,11,1]],"date-time":"2022-11-01T00:00:00Z","timestamp":1667260800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2022,11,1]],"date-time":"2022-11-01T00:00:00Z","timestamp":1667260800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"funder":[{"DOI":"10.13039\/100000001","name":"NSF","doi-asserted-by":"publisher","award":["DMS 1811724"],"award-info":[{"award-number":["DMS 1811724"]}],"id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Princeton SEAS Innovation Award"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE Trans. Inform. Theory"],"published-print":{"date-parts":[[2022,11]]},"DOI":"10.1109\/tit.2022.3184903","type":"journal-article","created":{"date-parts":[[2022,6,21]],"date-time":"2022-06-21T19:47:04Z","timestamp":1655840824000},"page":"7454-7470","source":"Crossref","is-referenced-by-count":14,"title":["Batch Optimization for DNA Synthesis"],"prefix":"10.1109","volume":"68","author":[{"given":"Konstantin","family":"Makarychev","sequence":"first","affiliation":[{"name":"Department of Computer Science, Northwestern University, Evanston, IL, USA"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-8948-2426","authenticated-orcid":false,"given":"Miklos Z.","family":"Racz","sequence":"additional","affiliation":[{"name":"Department of ORFE, Princeton University, Princeton, NJ, USA"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9422-2779","authenticated-orcid":false,"given":"Cyrus","family":"Rashtchian","sequence":"additional","affiliation":[{"name":"Department of Computer Science and Engineering, University of California at San Diego, La Jolla, CA, USA"}]},{"given":"Sergey","family":"Yekhanin","sequence":"additional","affiliation":[{"name":"Microsoft Research, Redmond, WA, USA"}]}],"member":"263","reference":[{"issue":"6","key":"ref1","first-page":"1","article-title":"On the molecular memory systems and the directed mutations","volume":"1","author":"Neiman","year":"1965","journal-title":"Radiotekhnika"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1126\/science.1226355"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1038\/nature11875"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1109\/TMBMC.2016.2537305"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1145\/2872362.2872397"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1038\/nature23017"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-017-05188-1"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1126\/science.aaj2038"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.4079"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1038\/s41576-019-0125-3"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1038\/s41596-019-0244-5"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.2918"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-020-18681-5"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1109\/ICASSP40776.2020.9053441"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1038\/nrg3296"},{"key":"ref16","first-page":"3360","article-title":"Clustering billions of reads for DNA data storage","volume-title":"Proc. Adv. Neural Inf. Process. Syst.","author":"Rashtchian"},{"key":"ref17","first-page":"910","article-title":"Reconstructing strings from random traces","volume-title":"Proc. 15th Annu. ACM-SIAM Symp. Discrete Algorithms (SODA)","author":"Batu"},{"key":"ref18","first-page":"389","article-title":"Trace reconstruction with constant deletion probability and related results","volume-title":"Proc. 19th Annu. ACM-SIAM Symp. Discrete Algorithms (SODA)","author":"Holenstein"},{"key":"ref19","first-page":"399","article-title":"Improved string reconstruction over insertion-deletion channels","volume-title":"Proc. 19th Annu. ACM-SIAM Symp. Discrete Algorithms (SODA)","author":"Viswanathan"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1109\/FOCS.2017.29"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.4171\/msl\/16"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1007\/3-540-45713-5_1"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1007\/3-540-45784-4_34"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btg1073"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1089\/1066527041410391"},{"issue":"2","key":"ref26","first-page":"89","article-title":"The distribution and deposition algorithm for multiple oligo nucleotide arrays","volume":"17","author":"Ning","year":"2006","journal-title":"Genome Informat."},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1007\/11780441_15"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1109\/VDAT.2010.5496742"},{"issue":"1","key":"ref29","first-page":"45","article-title":"Fast local-search-based parallel algorithms for DNA probe placement on small oligonucleotide arrays","volume":"12","author":"Trinca","year":"2010","journal-title":"Adv. Model. Optim."},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1007\/s10878-010-9329-3"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1080\/02564602.2014.959078"},{"key":"ref32","first-page":"113","article-title":"Fidelity probes for DNA arrays","volume-title":"Proc. 7th Int. Conf. Intell. Syst. Mol. Biol.","author":"Hubbell"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/18.4.529"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1089\/10665270252833163"},{"key":"ref35","first-page":"1","article-title":"Error and quality control coding for DNA microarrays","volume-title":"Proc. Inaugural Workshop Center Inf. Theory Appl.","author":"Milenkovic"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.1016\/0304-3975(81)90075-X"},{"key":"ref37","doi-asserted-by":"publisher","DOI":"10.1137\/S009753979223842X"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1109\/ISIT44484.2020.9174272"},{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1038\/s41587-019-0240-x"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-019-10258-1"},{"key":"ref41","doi-asserted-by":"publisher","DOI":"10.1109\/ISIT44484.2020.9174253"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.37236\/1761"},{"issue":"1","key":"ref43","first-page":"123","article-title":"Tight bounds on the number of string subsequences","volume":"1","author":"Hirschberg","year":"2000","journal-title":"J. Discrete Algorithms"},{"issue":"8","key":"ref44","first-page":"707","article-title":"Binary codes capable of correcting deletions, insertions, and reversals","volume":"28","author":"Levenshtein","year":"1966","journal-title":"Sov. Phys. Doklady"},{"key":"ref45","doi-asserted-by":"publisher","DOI":"10.1017\/S0963548304006248"},{"key":"ref46","doi-asserted-by":"publisher","DOI":"10.1137\/050643866"},{"key":"ref47","doi-asserted-by":"publisher","DOI":"10.1214\/21-AAP1709"},{"key":"ref48","doi-asserted-by":"publisher","DOI":"10.2307\/3212444"},{"key":"ref49","doi-asserted-by":"publisher","DOI":"10.1002\/rsa.3240060408"},{"key":"ref50","doi-asserted-by":"publisher","DOI":"10.1214\/16-ECP4029"},{"key":"ref51","doi-asserted-by":"publisher","DOI":"10.1016\/j.aim.2004.10.012"},{"key":"ref52","doi-asserted-by":"publisher","DOI":"10.1145\/1516512.1516519"},{"key":"ref53","doi-asserted-by":"publisher","DOI":"10.1145\/375360.375365"},{"key":"ref54","doi-asserted-by":"publisher","DOI":"10.1093\/acprof:oso\/9780199535255.001.0001"},{"key":"ref55","doi-asserted-by":"publisher","DOI":"10.1214\/aoms\/1177728174"},{"key":"ref56","doi-asserted-by":"publisher","DOI":"10.1214\/aop\/1176990746"}],"container-title":["IEEE Transactions on Information Theory"],"original-title":[],"link":[{"URL":"https:\/\/ieeexplore.ieee.org\/ielam\/18\/9925894\/9801834-aam.pdf","content-type":"application\/pdf","content-version":"am","intended-application":"syndication"},{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/18\/9925894\/09801834.pdf?arnumber=9801834","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,2,1]],"date-time":"2024-02-01T05:57:05Z","timestamp":1706767025000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/9801834\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2022,11]]},"references-count":56,"journal-issue":{"issue":"11"},"URL":"https:\/\/doi.org\/10.1109\/tit.2022.3184903","relation":{},"ISSN":["0018-9448","1557-9654"],"issn-type":[{"type":"print","value":"0018-9448"},{"type":"electronic","value":"1557-9654"}],"subject":[],"published":{"date-parts":[[2022,11]]}}}