{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,6,11]],"date-time":"2026-06-11T11:28:30Z","timestamp":1781177310239,"version":"3.54.1"},"reference-count":37,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"9","license":[{"start":{"date-parts":[[2024,9,1]],"date-time":"2024-09-01T00:00:00Z","timestamp":1725148800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/legalcode"},{"start":{"date-parts":[[2024,9,1]],"date-time":"2024-09-01T00:00:00Z","timestamp":1725148800000},"content-version":"am","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/legalcode"}],"funder":[{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["R21-CA253498"],"award-info":[{"award-number":["R21-CA253498"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["R01-HL159620"],"award-info":[{"award-number":["R01-HL159620"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["R43-DK134273"],"award-info":[{"award-number":["R43-DK134273"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["RF1-AG062109"],"award-info":[{"award-number":["RF1-AG062109"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["U2C-CA233238"],"award-info":[{"award-number":["U2C-CA233238"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Johnson and Johnson Enterprise Innovation, Inc."},{"DOI":"10.13039\/100000968","name":"American Heart Association","doi-asserted-by":"publisher","award":["20SFRN35460031"],"award-info":[{"award-number":["20SFRN35460031"]}],"id":[{"id":"10.13039\/100000968","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100020334","name":"Karen Toffler Charitable Trust","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100020334","id-type":"DOI","asserted-by":"publisher"}]},{"name":"National Science Foundation","award":["1551572"],"award-info":[{"award-number":["1551572"]}]},{"name":"National Science Foundation","award":["1838193"],"award-info":[{"award-number":["1838193"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE Trans. Med. Imaging"],"published-print":{"date-parts":[[2024,9]]},"DOI":"10.1109\/tmi.2024.3386108","type":"journal-article","created":{"date-parts":[[2024,4,8]],"date-time":"2024-04-08T16:58:33Z","timestamp":1712595513000},"page":"3085-3097","source":"Crossref","is-referenced-by-count":36,"title":["Graph Attention-Based Fusion of Pathology Images and Gene Expression for Prediction of Cancer Survival"],"prefix":"10.1109","volume":"43","author":[{"given":"Yi","family":"Zheng","sequence":"first","affiliation":[{"name":"Department of Computer Science, Boston University, Boston, MA, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-5855-4415","authenticated-orcid":false,"given":"Regan D.","family":"Conrad","sequence":"additional","affiliation":[{"name":"Department of Medicine, Boston University Chobanian &#x0026; Avedisian School of Medicine, Boston, MA, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Emily J.","family":"Green","sequence":"additional","affiliation":[{"name":"Department of Medicine, Boston University Chobanian &#x0026; Avedisian School of Medicine, Boston, MA, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3122-2875","authenticated-orcid":false,"given":"Eric J.","family":"Burks","sequence":"additional","affiliation":[{"name":"Pathology and Laboratory Medicine, Boston University Chobanian &#x0026; Avedisian School of Medicine, Boston, MA, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4491-6868","authenticated-orcid":false,"given":"Margrit","family":"Betke","sequence":"additional","affiliation":[{"name":"Department of Computer Science and the Faculty of Computing and Data Sciences, Boston University, Boston, MA, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6699-2132","authenticated-orcid":false,"given":"Jennifer E.","family":"Beane","sequence":"additional","affiliation":[{"name":"Department of Medicine, Boston University Chobanian &#x0026; Avedisian School of Medicine, Boston, MA, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-5312-8644","authenticated-orcid":false,"given":"Vijaya B.","family":"Kolachalama","sequence":"additional","affiliation":[{"name":"Department of Computer Science and the Faculty of Computing and Data Sciences, Boston University, Boston, MA, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"263","reference":[{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1038\/s41551-020-0578-x"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btz914"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1038\/s41592-021-01343-9"},{"key":"ref4","volume-title":"The Cancer Genome Atlas Program","year":"2023"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1016\/j.ccell.2022.07.004"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1109\/ICCV48922.2021.00398"},{"key":"ref7","article-title":"MLP-Mixer: An all-MLP architecture for vision","author":"Tolstikhin","year":"2021","journal-title":"arXiv:2105.01601"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1109\/TMI.2022.3176598"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1021\/pr501254j"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1056\/NEJMoa1102873"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1158\/2159-8290.CD-20-1285"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1038\/s41586-020-2922-4"},{"key":"ref13","first-page":"1597","article-title":"A simple framework for contrastive learning of visual representations","volume-title":"Proc. 37th Int. Conf. Mach. Learn.","volume":"119","author":"Chen"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1016\/j.patcog.2024.110925"},{"key":"ref15","article-title":"How attentive are graph attention networks?","volume-title":"Proc. Int. Conf. Learn. Represent. (ICLR)","author":"Brody"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1056\/NEJMp1607591"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp616"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-9-559"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1093\/biostatistics\/kxj037"},{"key":"ref20","article-title":"Attention is all you need","author":"Vaswani","year":"2017","journal-title":"arXiv:1706. 03762"},{"key":"ref21","first-page":"2127","article-title":"Attention-based deep multiple instance learning","volume-title":"Proc. Int. Conf. Mach. Learn.","author":"Ilse"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1109\/TPAMI.2020.2979450"},{"key":"ref23","article-title":"Grad-CAM: Visual explanations from deep networks via gradient-based localization","author":"Selvaraju","year":"2016","journal-title":"arXiv:1610.02391"},{"key":"ref24","first-page":"972","article-title":"Self-normalizing neural networks","volume-title":"Proc. Adv. Neural Inf. Process. Syst.","volume":"30","author":"Klambauer"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-030-87237-3_33"},{"key":"ref26","first-page":"2136","article-title":"TransMIL: Transformer based correlated multiple instance learning for whole slide image classification","volume-title":"Proc. Adv. Neural Inf. Process. Syst. (NeurIPS)","volume":"34","author":"Shao"},{"key":"ref27","doi-asserted-by":"crossref","DOI":"10.1016\/j.media.2020.101789","article-title":"Whole slide images based cancer survival prediction using attention guided deep multiple instance learning networks","volume":"65","author":"Yao","year":"2020","journal-title":"Med. Image Anal."},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1109\/TMI.2020.3021387"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1109\/ICCV51070.2023.01942"},{"issue":"16","key":"ref30","first-page":"14138","article-title":"Nystr\u00f6mFormer: A Nystr\u00f6m-based algorithm for approximating self-attention","volume-title":"Proc. AAAI Conf. Artif. Intell.","volume":"35","author":"Xiong"},{"key":"ref31","first-page":"874","article-title":"Spectral clustering with graph neural networks for graph pooling","volume-title":"Proc. Int. Conf. Mach. Learn.","author":"Bianchi"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1093\/clinids\/9.5.884"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1038\/s41591-023-02230-w"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1016\/j.jtho.2021.11.003"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1016\/j.lungcan.2022.07.016"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.1016\/j.cllc.2022.12.006"},{"issue":"4","key":"ref37","first-page":"1","article-title":"A method of establishing groups of equal amplitude in plant sociology based on similarity of species and its application to analyses of the vegetation on Danish commons","volume":"5","author":"S\u00f8rensen","year":"1948","journal-title":"Kongelige Danske Videnskabernes Selskab"}],"container-title":["IEEE Transactions on Medical Imaging"],"original-title":[],"link":[{"URL":"https:\/\/ieeexplore.ieee.org\/ielam\/42\/10663877\/10494385-aam.pdf","content-type":"application\/pdf","content-version":"am","intended-application":"syndication"},{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/42\/10663877\/10494385.pdf?arnumber=10494385","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,9,6]],"date-time":"2024-09-06T02:58:58Z","timestamp":1725591538000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/10494385\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,9]]},"references-count":37,"journal-issue":{"issue":"9"},"URL":"https:\/\/doi.org\/10.1109\/tmi.2024.3386108","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/2023.10.26.564236","asserted-by":"object"}]},"ISSN":["0278-0062","1558-254X"],"issn-type":[{"value":"0278-0062","type":"print"},{"value":"1558-254X","type":"electronic"}],"subject":[],"published":{"date-parts":[[2024,9]]}}}