{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,25]],"date-time":"2026-10-25T22:46:05Z","timestamp":1792968365051,"version":"4.5.0"},"reference-count":64,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"8","license":[{"start":{"date-parts":[[2024,8,1]],"date-time":"2024-08-01T00:00:00Z","timestamp":1722470400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2024,8,1]],"date-time":"2024-08-01T00:00:00Z","timestamp":1722470400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2024,8,1]],"date-time":"2024-08-01T00:00:00Z","timestamp":1722470400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"funder":[{"name":"Dutch Top Consortium for Knowledge and Innovation","award":["TU18034"],"award-info":[{"award-number":["TU18034"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE Trans. Visual. Comput. Graphics"],"published-print":{"date-parts":[[2024,8]]},"DOI":"10.1109\/tvcg.2023.3282364","type":"journal-article","created":{"date-parts":[[2023,6,2]],"date-time":"2023-06-02T15:39:23Z","timestamp":1685720363000},"page":"4895-4909","source":"Crossref","is-referenced-by-count":11,"title":["PanVA: Pangenomic Variant Analysis"],"prefix":"10.1109","volume":"30","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-3676-1341","authenticated-orcid":false,"given":"Astrid","family":"van den Brandt","sequence":"first","affiliation":[{"name":"Department of Mathematics and Computer Science, Eindhoven University of Technology, Eindhoven, AZ, The Netherlands"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-2608-6311","authenticated-orcid":false,"given":"Eef M.","family":"Jonkheer","sequence":"additional","affiliation":[{"name":"Bioinformatics Group, Wageningen University &#x0026; Research, Wageningen, PB, The Netherlands"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6247-5499","authenticated-orcid":false,"given":"Dirk-Jan M.","family":"van Workum","sequence":"additional","affiliation":[{"name":"Bioinformatics Group, Wageningen University &#x0026; Research, Wageningen, PB, The Netherlands"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0517-1322","authenticated-orcid":false,"given":"Huub","family":"van de Wetering","sequence":"additional","affiliation":[{"name":"Department of Mathematics and Computer Science, Eindhoven University of Technology, Eindhoven, AZ, The Netherlands"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-5239-5321","authenticated-orcid":false,"given":"Sandra","family":"Smit","sequence":"additional","affiliation":[{"name":"Bioinformatics Group, Wageningen University &#x0026; Research, Wageningen, PB, The Netherlands"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1034-737X","authenticated-orcid":false,"given":"Anna","family":"Vilanova","sequence":"additional","affiliation":[{"name":"Department of Mathematics and Computer Science, Eindhoven University of Technology, Eindhoven, AZ, The Netherlands"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"263","reference":[{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1038\/ng.715"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.3390\/biology6010021"},{"issue":"1","key":"ref3","first-page":"118","article-title":"Computational pan-genomics: Status, promises and challenges","volume":"19","author":"Marschall","year":"2018","journal-title":"Brief. Bioinf."},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1109\/TVCG.2013.214"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1111\/cgf.13727"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp033"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbs017"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkw958"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkx977"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btac506"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1109\/TVCG.2012.213"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1109\/TVCG.2018.2865241"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1109\/TVCG.2020.3030405"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1109\/TVCG.2015.2467271"},{"key":"ref15","article-title":"Visual analytics for plant pangenomes","author":"Smit","year":"2022"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1101\/gr.214155.116"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btw455"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1016\/j.tig.2019.11.006"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1038\/s41477-020-0733-0"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1109\/TVCG.2017.2744199"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2164-11-293"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1038\/s41586-020-2961-x"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1109\/TVCG.2009.167"},{"key":"ref24","first-page":"74","article-title":"Interactive exploration of genomic conservation","volume-title":"Proc. Graph. Interface","author":"Bandi"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-023-02914-z"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1109\/TVCG.2021.3114876"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1186\/1756-0381-5-5"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1109\/TVCG.2016.2598469"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1093\/bioadv\/vbac075"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-13-S8-S2"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1007732"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btac308"},{"key":"ref33","article-title":"Computomics GmbH","year":"2022"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-014-0524-x"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1111\/cgf.13728"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.1177\/1473871611416549"},{"key":"ref37","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkab301"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1111\/j.1467-8659.2009.01710.x"},{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1109\/TVCG.2018.2811488"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1201\/b17511"},{"key":"ref41","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/16.11.1046"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.1002\/0471250953.bi0909s28"},{"key":"ref43","doi-asserted-by":"publisher","DOI":"10.1109\/TVCG.2021.3100413"},{"key":"ref44","doi-asserted-by":"publisher","DOI":"10.1145\/2890478"},{"key":"ref45","doi-asserted-by":"publisher","DOI":"10.1198\/tas.2009.0033"},{"key":"ref46","doi-asserted-by":"publisher","DOI":"10.1109\/TVCG.2021.3050497"},{"key":"ref47","doi-asserted-by":"publisher","DOI":"10.1038\/msb.2011.75"},{"key":"ref48","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bts199"},{"key":"ref49","doi-asserted-by":"publisher","DOI":"10.1109\/INFVIS.1999.801854"},{"key":"ref50","article-title":"Preserving the mental map of a diagram","author":"Eades","year":"1991"},{"key":"ref51","doi-asserted-by":"publisher","DOI":"10.1109\/MC.2002.1016905"},{"key":"ref52","doi-asserted-by":"publisher","DOI":"10.1038\/sdata.2017.151"},{"key":"ref53","volume-title":"Pattern Classification","author":"Duda","year":"2001"},{"key":"ref54","doi-asserted-by":"publisher","DOI":"10.1186\/s13015-017-0119-7"},{"key":"ref55","doi-asserted-by":"publisher","DOI":"10.1017\/CBO9780511974076"},{"key":"ref56","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2010.57"},{"key":"ref57","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/18.20.6097"},{"key":"ref58","doi-asserted-by":"publisher","DOI":"10.1109\/TVCG.2021.3114868"},{"key":"ref59","doi-asserted-by":"publisher","DOI":"10.1186\/1753-6561-8-S2-S8"},{"key":"ref60","doi-asserted-by":"publisher","DOI":"10.1186\/s12864-021-07583-5"},{"key":"ref61","doi-asserted-by":"publisher","DOI":"10.1094\/pdis-12-16-1810-re"},{"key":"ref62","doi-asserted-by":"publisher","DOI":"10.1016\/j.cell.2016.05.063"},{"key":"ref63","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-020-14779-y"},{"key":"ref64","first-page":"37","article-title":"SequenceJuxtaposer: Fluid navigation for large-scale sequence comparison in context","volume-title":"Proc. German Conf. Bioinf.","author":"Slack"}],"container-title":["IEEE Transactions on Visualization and Computer Graphics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/2945\/10579898\/10143227.pdf?arnumber=10143227","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,7,2]],"date-time":"2024-07-02T00:32:47Z","timestamp":1719880367000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/10143227\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,8]]},"references-count":64,"journal-issue":{"issue":"8"},"URL":"https:\/\/doi.org\/10.1109\/tvcg.2023.3282364","relation":{"is-supplemented-by":[{"id-type":"doi","id":"10.36227\/techrxiv.21572433","asserted-by":"object"}],"has-preprint":[{"id-type":"doi","id":"10.36227\/techrxiv.21572433","asserted-by":"object"},{"id-type":"doi","id":"10.36227\/techrxiv.21572433.v2","asserted-by":"object"},{"id-type":"doi","id":"10.36227\/techrxiv.21572433.v1","asserted-by":"object"}]},"ISSN":["1077-2626","1941-0506","2160-9306"],"issn-type":[{"value":"1077-2626","type":"print"},{"value":"1941-0506","type":"electronic"},{"value":"2160-9306","type":"electronic"}],"subject":[],"published":{"date-parts":[[2024,8]]}}}