{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,6,18]],"date-time":"2026-06-18T19:20:30Z","timestamp":1781810430200,"version":"3.54.5"},"reference-count":62,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"1","license":[{"start":{"date-parts":[[2026,1,1]],"date-time":"2026-01-01T00:00:00Z","timestamp":1767225600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2026,1,1]],"date-time":"2026-01-01T00:00:00Z","timestamp":1767225600000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2026,1,1]],"date-time":"2026-01-01T00:00:00Z","timestamp":1767225600000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"funder":[{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["R33 CA263666"],"award-info":[{"award-number":["R33 CA263666"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["OT2 OD033758"],"award-info":[{"award-number":["OT2 OD033758"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["U24 CA268108"],"award-info":[{"award-number":["U24 CA268108"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE Trans. Visual. Comput. Graphics"],"published-print":{"date-parts":[[2026,1]]},"DOI":"10.1109\/tvcg.2025.3633869","type":"journal-article","created":{"date-parts":[[2025,11,21]],"date-time":"2025-11-21T18:42:26Z","timestamp":1763750546000},"page":"342-352","source":"Crossref","is-referenced-by-count":1,"title":["Can LLMs Bridge Domain and Visualization? A Case Study on High-Dimension Data Visualization in Single-Cell Transcriptomics"],"prefix":"10.1109","volume":"32","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-1728-4102","authenticated-orcid":false,"given":"Qianwen","family":"Wang","sequence":"first","affiliation":[{"name":"Harvard Medical School, United States"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0007-8346-4095","authenticated-orcid":false,"given":"Xinyi","family":"Liu","sequence":"additional","affiliation":[{"name":"Northeastern University, United States"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0327-8297","authenticated-orcid":false,"given":"Nils","family":"Gehlenborg","sequence":"additional","affiliation":[{"name":"Harvard Medical School, United States"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"263","reference":[{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1145\/3173574.3174156"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.18653\/v1\/2022.emnlp-main.130"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2015.2467851"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2022.3209490"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.4314"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2011.229"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1145\/2669557.2669559"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.15252\/embr.201847379"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2022.3209408"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1145\/3543873.3587324"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2022.3156760"},{"key":"ref12","volume-title":"The Turking Test: Can Language Models Understand Instructions? abs\/2010.11982","author":"Efrat","year":"2020"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1109\/mcg.2015.91"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2019.2944182"},{"key":"ref15","volume-title":"Pypaperbot","author":"Ferrulli","year":"2020"},{"key":"ref16","first-page":"82","article-title":"LLMs Accelerate Annotation for Medical Information Extraction","volume-title":"Proceedings of the 3rd Machine Learning for Health Symposium, vol. 225 of Proceedings of Machine Learning Research","author":"Goel","year":"2023"},{"key":"ref17","volume-title":"Towards an AI co-scientist","author":"Gottweis","year":"2025"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1016\/j.visinf.2022.04.003"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.18653\/v1\/2024.naacl-industry.15"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1242\/dev.180398"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.18653\/v1\/2023.acl-long.108"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1111\/cgf.14859"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1109\/vast.2010.5652392"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.18653\/v1\/2023.bionlp-1.30"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1109\/pacificvis.2012.6183556"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1109\/mcg.2025.3583979"},{"key":"ref27","volume-title":"Automatic Text Summarization of COVID-19 Medical Research Articles using BERT and GPT-2","author":"Kieuvongngam","year":"2020"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btz228"},{"key":"ref29","article-title":"Training Socially Aligned Language Models on Simulated Social Interactions","volume-title":"The Twelfth International Conference on Learning Representations. ICLR","author":"Liu","year":"2024"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2016.2640960"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2018.2834341"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1016\/j.cell.2015.05.002"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1016\/j.celrep.2019.10.131"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-022-35297-z"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1186\/s12915-018-0527-2"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2009.111"},{"key":"ref37","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2018.2846735"},{"key":"ref38","author":"Nori","year":"2023","journal-title":"Capabilities of GPT-4 on Medical Challenge Problems"},{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1111\/cgf.13727"},{"key":"ref40","year":"2023","journal-title":"OpenAI. GPT"},{"key":"ref41","volume-title":"OpenAI. Introducing Deep Research in ChatGPT","year":"2025"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2014.2346755"},{"key":"ref43","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2016.2598495"},{"key":"ref44","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2017.2744184"},{"key":"ref45","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2012.213"},{"key":"ref46","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2013.153"},{"key":"ref47","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-018-35218-5"},{"key":"ref48","doi-asserted-by":"publisher","DOI":"10.1093\/database\/baaa073"},{"key":"ref49","doi-asserted-by":"publisher","DOI":"10.1016\/j.celrep.2018.11.034"},{"key":"ref50","volume-title":"LLaMA: Open and Efficient Foundation Language Models","author":"Touvron","year":"2023"},{"key":"ref51","doi-asserted-by":"publisher","DOI":"10.1038\/s41591-019-0468-5"},{"key":"ref52","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2021.3106142"},{"key":"ref53","doi-asserted-by":"publisher","DOI":"10.1109\/vis54172.2023.00031"},{"key":"ref54","doi-asserted-by":"publisher","DOI":"10.1145\/3544548.3581127"},{"key":"ref55","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2021.3114840"},{"key":"ref56","doi-asserted-by":"publisher","DOI":"10.1109\/tvcg.2019.2921323"},{"key":"ref57","doi-asserted-by":"crossref","first-page":"4195","DOI":"10.18653\/v1\/2021.findings-emnlp.354","article-title":"Want To Reduce Labeling Cost? GPT-3 Can Help","volume-title":"Findings of the Association for Computational Linguistics: EMNLP 2021","author":"Wang","year":"2021"},{"key":"ref58","doi-asserted-by":"publisher","DOI":"10.1038\/s41422-020-00455-9"},{"key":"ref59","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-019-1663-x"},{"key":"ref60","doi-asserted-by":"publisher","DOI":"10.1038\/s41588-021-00911-1"},{"key":"ref61","doi-asserted-by":"publisher","DOI":"10.1038\/s43587-023-00373-6"},{"key":"ref62","doi-asserted-by":"publisher","DOI":"10.1145\/3173574.3173704"}],"container-title":["IEEE Transactions on Visualization and Computer Graphics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx8\/2945\/11373125\/11264318.pdf?arnumber=11264318","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,2,10]],"date-time":"2026-02-10T00:33:16Z","timestamp":1770683596000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/11264318\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,1]]},"references-count":62,"journal-issue":{"issue":"1"},"URL":"https:\/\/doi.org\/10.1109\/tvcg.2025.3633869","relation":{},"ISSN":["1077-2626","1941-0506","2160-9306"],"issn-type":[{"value":"1077-2626","type":"print"},{"value":"1941-0506","type":"electronic"},{"value":"2160-9306","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,1]]}}}