{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,3]],"date-time":"2026-10-03T18:39:36Z","timestamp":1791052776992,"version":"4.1.0"},"reference-count":41,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"1","license":[{"start":{"date-parts":[[2025,1,1]],"date-time":"2025-01-01T00:00:00Z","timestamp":1735689600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2025,1,1]],"date-time":"2025-01-01T00:00:00Z","timestamp":1735689600000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2025,1,1]],"date-time":"2025-01-01T00:00:00Z","timestamp":1735689600000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"funder":[{"name":"French Health Data Hub"},{"name":"Use Case \u201cCOMPARING NATIONWIDE HEALTH TRAJECTORIES TO EVALUATE EUROPEAN HEALTH DATA INTEROPERABILITY"},{"DOI":"10.13039\/501100002301","name":"Eesti Teadusagentuur","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100002301","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE Trans. Comput. Biol. Bioinform."],"published-print":{"date-parts":[[2025,1]]},"DOI":"10.1109\/tcbbio.2024.3498458","type":"journal-article","created":{"date-parts":[[2025,1,3]],"date-time":"2025-01-03T19:18:16Z","timestamp":1735931896000},"page":"136-150","source":"Crossref","is-referenced-by-count":3,"title":["Optimizing Global Network Alignment With a Genetic Algorithm: Leveraging Pre-Trained Embeddings for Protein Sequences and Gene Ontology Terms"],"prefix":"10.1109","volume":"22","author":[{"ORCID":"https:\/\/orcid.org\/0009-0004-7668-9163","authenticated-orcid":false,"given":"Warith Eddine","family":"Djeddi","sequence":"first","affiliation":[{"name":"Department of Computer Sciences, Faculty of Sciences, University Tunis El Manar, Tunis, Tunisia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sadok Ben","family":"Yahia","sequence":"additional","affiliation":[{"name":"University of Southern Denmark, S&#x00F8;nderborg, Denmark"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9799-9484","authenticated-orcid":false,"given":"Gayo","family":"Diallo","sequence":"additional","affiliation":[{"name":"Team AHeaD, Bordeaux Population Health Inserm 1219, University of Bordeaux rue L\u00e9o Saignat, Bordeaux, France"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"263","reference":[{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1038\/nrg1272"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1038\/nbt1196"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1186\/s12964-015-0116-8"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp203"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btaa962"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0067995"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btt713"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btu409"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv161"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2017.2740381"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btu450"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1016\/S0022-5193(03)00035-3"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1016\/j.csbj.2020.09.011"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btl301"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1007\/s11517-021-02428-5"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.3390\/e24050730"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1109\/TKDE.2017.2754499"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1145\/2623330.2623732"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1145\/2939672.2939754"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.3389\/fgene.2019.00381"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1109\/TPAMI.2021.3095381"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1126\/science.ade2574"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-023-05593-6"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.3390\/app12115403"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-018-05469-x"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1007\/s10462-023-10465-9"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1109\/BASNA.2010.5730298"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1109\/IPDPS.2018.00098"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1007\/11569596_31"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevE.70.066111"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1186\/1752-0509-6-92"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkt1115"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1186\/2047-217X-3-4"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1088\/1742-5468\/2008\/10\/P10008"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btw348"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.1016\/j.vetmic.2020.108693"},{"key":"ref37","doi-asserted-by":"publisher","DOI":"10.1038\/s41586-020-2708-8"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btaa550"},{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btaa496"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btaa285"},{"key":"ref41","doi-asserted-by":"publisher","DOI":"10.1080\/22221751.2020.1764871"}],"container-title":["IEEE Transactions on Computational Biology and Bioinformatics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx8\/10723156\/10820042\/10819940.pdf?arnumber=10819940","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,2,10]],"date-time":"2025-02-10T18:30:06Z","timestamp":1739212206000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/10819940\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,1]]},"references-count":41,"journal-issue":{"issue":"1"},"URL":"https:\/\/doi.org\/10.1109\/tcbbio.2024.3498458","relation":{},"ISSN":["2998-4165"],"issn-type":[{"value":"2998-4165","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025,1]]}}}