{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,20]],"date-time":"2026-10-20T22:17:09Z","timestamp":1792534629826,"version":"4.5.0"},"reference-count":59,"publisher":"Wiley","issue":"9","license":[{"start":{"date-parts":[[2014,2,20]],"date-time":"2014-02-20T00:00:00Z","timestamp":1392854400000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/onlinelibrary.wiley.com\/termsAndConditions#vor"}],"content-domain":{"domain":["enviromicro-journals.onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["Environmental Microbiology"],"published-print":{"date-parts":[[2014,9]]},"abstract":"<jats:title>Summary<\/jats:title>\n                  <jats:p>\n                    In an acetate\u2010fed anaerobic\u2013aerobic membrane bioreactor with deteriorated enhanced biological phosphorus removal (\n                    <jats:styled-content style=\"fixed-case\">EBPR<\/jats:styled-content>\n                    ),\n                    <jats:styled-content style=\"fixed-case\">\n                      <jats:italic>D<\/jats:italic>\n                    <\/jats:styled-content>\n                    <jats:italic>efluviicoccus<\/jats:italic>\n                    \u2010related tetrad\u2010forming organisms (\n                    <jats:styled-content style=\"fixed-case\">DTFO<\/jats:styled-content>\n                    ) were observed to predominate in the microbial community. Using metagenomics, a partial genome of the predominant\n                    <jats:styled-content style=\"fixed-case\">DTFO<\/jats:styled-content>\n                    , \u2018\n                    <jats:styled-content style=\"fixed-case\">\n                      <jats:italic>C<\/jats:italic>\n                    <\/jats:styled-content>\n                    <jats:italic>andidatus<\/jats:italic>\n                    \u2005\n                    <jats:styled-content style=\"fixed-case\">D<\/jats:styled-content>\n                    efluviicoccus tetraformis strain\n                    <jats:styled-content style=\"fixed-case\">TFO<\/jats:styled-content>\n                    71\u2019, was successfully constructed and characterized. Examining the genome confirmed the presence of genes related to the synthesis and degradation of glycogen and polyhydroxyalkanoate (\n                    <jats:styled-content style=\"fixed-case\">PHA<\/jats:styled-content>\n                    ), which function as energy and carbon storage compounds.\n                    <jats:styled-content style=\"fixed-case\">TFO<\/jats:styled-content>\n                    71 and \u2018\n                    <jats:styled-content style=\"fixed-case\">\n                      <jats:italic>C<\/jats:italic>\n                    <\/jats:styled-content>\n                    <jats:italic>andidatus<\/jats:italic>\n                    \u2005\n                    <jats:styled-content style=\"fixed-case\">A<\/jats:styled-content>\n                    ccumulibacter phosphatis\u2019 (\n                    <jats:styled-content style=\"fixed-case\">CAP<\/jats:styled-content>\n                    )\n                    <jats:styled-content style=\"fixed-case\">UW<\/jats:styled-content>\n                    \u20101 and\n                    <jats:styled-content style=\"fixed-case\">CAP UW<\/jats:styled-content>\n                    \u20102, representative polyphosphate\u2010accumulating organisms (\n                    <jats:styled-content style=\"fixed-case\">PAO<\/jats:styled-content>\n                    ), have\n                    <jats:styled-content style=\"fixed-case\">PHA<\/jats:styled-content>\n                    metabolism\u2010related genes with high homology, but\n                    <jats:styled-content style=\"fixed-case\">TFO<\/jats:styled-content>\n                    71 has unique genes for\n                    <jats:styled-content style=\"fixed-case\">PHA<\/jats:styled-content>\n                    synthesis, gene regulation and granule management. We further discovered genes encoding\n                    <jats:styled-content style=\"fixed-case\">DTFO<\/jats:styled-content>\n                    polyphosphate (\n                    <jats:styled-content style=\"fixed-case\">polyP<\/jats:styled-content>\n                    ) synthesis, suggesting that\n                    <jats:styled-content style=\"fixed-case\">TFO<\/jats:styled-content>\n                    71 may synthesize\n                    <jats:styled-content style=\"fixed-case\">polyP<\/jats:styled-content>\n                    under untested conditions. However,\n                    <jats:styled-content style=\"fixed-case\">TFO<\/jats:styled-content>\n                    71 may not activate these genes under\n                    <jats:styled-content style=\"fixed-case\">EBPR<\/jats:styled-content>\n                    conditions because the retrieved genome does not contain all inorganic phosphate transporters that are characteristic of\n                    <jats:styled-content style=\"fixed-case\">PAOs<\/jats:styled-content>\n                    (\n                    <jats:styled-content style=\"fixed-case\">CAP UW<\/jats:styled-content>\n                    \u20101,\n                    <jats:styled-content style=\"fixed-case\">CAP UW<\/jats:styled-content>\n                    \u20102,\n                    <jats:styled-content style=\"fixed-case\">\n                      <jats:italic>M<\/jats:italic>\n                    <\/jats:styled-content>\n                    <jats:italic>icrolunatus phosphovorus<\/jats:italic>\n                    \u2005\n                    <jats:styled-content style=\"fixed-case\">NM<\/jats:styled-content>\n                    \u20101 and\n                    <jats:styled-content style=\"fixed-case\">\n                      <jats:italic>T<\/jats:italic>\n                    <\/jats:styled-content>\n                    <jats:italic>etrasphaera<\/jats:italic>\n                    species). As a first step in characterizing\n                    <jats:styled-content style=\"fixed-case\">EBPR<\/jats:styled-content>\n                    \u2010associated\n                    <jats:styled-content style=\"fixed-case\">DTFO<\/jats:styled-content>\n                    metabolism, this study identifies important differences between\n                    <jats:styled-content style=\"fixed-case\">DTFO<\/jats:styled-content>\n                    and\n                    <jats:styled-content style=\"fixed-case\">PAO<\/jats:styled-content>\n                    that may contribute to\n                    <jats:styled-content style=\"fixed-case\">EBPR<\/jats:styled-content>\n                    community competition and deterioration.\n                  <\/jats:p>","DOI":"10.1111\/1462-2920.12383","type":"journal-article","created":{"date-parts":[[2014,1,15]],"date-time":"2014-01-15T21:53:50Z","timestamp":1389822830000},"page":"2739-2751","update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":42,"title":["Metagenomic characterization of \u2018\n                    <scp>\n                      <i>C<\/i>\n                    <\/scp>\n                    <i>andidatus<\/i>\n                    \u2005\n                    <scp>D<\/scp>\n                    efluviicoccus tetraformis strain\n                    <scp>TFO<\/scp>\n                    71\u2019, a tetrad\u2010forming organism, predominant in an anaerobic\u2013aerobic membrane bioreactor with deteriorated biological phosphorus removal"],"prefix":"10.1111","volume":"16","author":[{"given":"Masaru K.","family":"Nobu","sequence":"first","affiliation":[{"name":"Department of Civil and Environmental Engineering University of Illinois 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