{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,10]],"date-time":"2026-10-10T13:29:33Z","timestamp":1791638973626,"version":"4.3.4"},"reference-count":45,"publisher":"Wiley","issue":"7","license":[{"start":{"date-parts":[[2020,3,12]],"date-time":"2020-03-12T00:00:00Z","timestamp":1583971200000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["enviromicro-journals.onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["Environmental Microbiology"],"published-print":{"date-parts":[[2020,7]]},"abstract":"<jats:title>Summary<\/jats:title>\n                  <jats:p>\n                    Fresh fruits and vegetables have numerous benefits to human health. Unfortunately, their consumption is increasingly associated with food\u2010borne diseases,\n                    <jats:styled-content style=\"fixed-case\">\n                      <jats:italic>Salmonella enterica<\/jats:italic>\n                    <\/jats:styled-content>\n                    being their most frequent cause in Europe. Agricultural soils were postulated as reservoir of human pathogens, contributing to the contamination of crops during the growing period. Since the competition with the indigenous soil microbiota for colonization sites plays a major role in the success of invading species, we hypothesized that reduced diversity will enhance the chance of\n                    <jats:italic>Salmonella<\/jats:italic>\n                    to successfully establish in agricultural environments. We demonstrated that the abundance of\n                    <jats:italic>Salmonella<\/jats:italic>\n                    drastically decreased in soil with highly diverse indigenous prokaryotic community, while in soil with reduced prokaryotic diversity,\n                    <jats:italic>Salmonella<\/jats:italic>\n                    persisted for a long period. Furthermore, in communities with low diversity,\n                    <jats:italic>Salmonella<\/jats:italic>\n                    had an impact on the abundance of other taxa. The high physiological plasticity allows\n                    <jats:italic>Salmonella<\/jats:italic>\n                    to use agricultural soils as alternative habitat which might provide a route of animal\/human infections. In addition, adjusted transcriptional profile with amino acid biosynthesis and the glyoxylate cycle most prominently regulated, suggests an adaptation to the soil environment. Our results underline the importance of the maintenance of diverse soil microbiome as a part of strategy aiming at reduced risk of food\u2010borne salmonellosis outbreaks.\n                  <\/jats:p>","DOI":"10.1111\/1462-2920.14972","type":"journal-article","created":{"date-parts":[[2020,3,4]],"date-time":"2020-03-04T00:56:56Z","timestamp":1583283416000},"page":"2639-2652","update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":59,"title":["<i>Salmonella<\/i>\n                    persistence in soil depends on reciprocal interactions with indigenous microorganisms"],"prefix":"10.1111","volume":"22","author":[{"given":"Jasper","family":"Schierstaedt","sequence":"first","affiliation":[{"name":"Plant\u2010Microbe Systems Leibniz Institute of Vegetable and Ornamental Crops  Gro\u00dfbeeren Germany"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sven","family":"Jechalke","sequence":"additional","affiliation":[{"name":"Institute for Phytopathology, Centre for BioSystems, Land Use and Nutrition, Justus Liebig University Giessen  Giessen Germany"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Joseph","family":"Nesme","sequence":"additional","affiliation":[{"name":"Section of Microbiology, Department of Biology University of Copenhagen  Copenhagen Denmark"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Klaus","family":"Neuhaus","sequence":"additional","affiliation":[{"name":"ZIEL \u2010 Institute for Food &amp; Health, Core Facility Microbiome\/NGS, Technische Universit\u00e4t M\u00fcnchen  Freising Germany"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"S\u00f8ren J.","family":"S\u00f8rensen","sequence":"additional","affiliation":[{"name":"Section of Microbiology, Department of Biology University of Copenhagen  Copenhagen Denmark"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Rita","family":"Grosch","sequence":"additional","affiliation":[{"name":"Plant\u2010Microbe Systems Leibniz Institute of Vegetable and Ornamental Crops  Gro\u00dfbeeren Germany"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Kornelia","family":"Smalla","sequence":"additional","affiliation":[{"name":"Institute for Epidemiology and Pathogen Diagnostics, Julius K\u00fchn\u2010Institut, Federal Research Centre for Cultivated Plants  Braunschweig Germany"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0869-6423","authenticated-orcid":false,"given":"Adam","family":"Schikora","sequence":"additional","affiliation":[{"name":"Institute for Epidemiology and Pathogen Diagnostics, Julius K\u00fchn\u2010Institut, Federal Research Centre for Cultivated Plants  Braunschweig Germany"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2020,3,12]]},"reference":[{"key":"e_1_2_8_2_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0001657"},{"key":"e_1_2_8_3_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1574-6941.2009.00654.x"},{"key":"e_1_2_8_4_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2389.2008.01016.x"},{"key":"e_1_2_8_5_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.scitotenv.2013.08.037"},{"key":"e_1_2_8_6_1","doi-asserted-by":"publisher","DOI":"10.1038\/35012241"},{"key":"e_1_2_8_7_1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkt1244"},{"key":"e_1_2_8_8_1","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.69.8.4915-4926.2003"},{"key":"e_1_2_8_9_1","first-page":"191","article-title":"Salmonella \u2010 how a metabolic generalist adopts an intracellular lifestyle during infection","volume":"4","author":"Dandekar T.","year":"2014","journal-title":"Front Cell 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J.(2014). Entwicklung und Validierung schneller und selektiver Verfahren zum Nachweis vonSalmonella enterica Cronobacter spp. undBacillus cereusin Milcherzeugnissen. Hohenheim: Kommunikations\u2010 Informations\u2010 und Medienzentrum der Universit\u00e4t Hohenheim."}],"container-title":["Environmental Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.wiley.com\/onlinelibrary\/tdm\/v1\/articles\/10.1111%2F1462-2920.14972","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1111\/1462-2920.14972","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/full-xml\/10.1111\/1462-2920.14972","content-type":"application\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/sfamjournals.onlinelibrary.wiley.com\/doi\/pdf\/10.1111\/1462-2920.14972","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,10,30]],"date-time":"2025-10-30T22:17:59Z","timestamp":1761862679000},"score":1,"resource":{"primary":{"URL":"https:\/\/sfamjournals.onlinelibrary.wiley.com\/doi\/10.1111\/1462-2920.14972"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020,3,12]]},"references-count":45,"journal-issue":{"issue":"7","published-print":{"date-parts":[[2020,7]]}},"alternative-id":["10.1111\/1462-2920.14972"],"URL":"https:\/\/doi.org\/10.1111\/1462-2920.14972","archive":["Portico"],"relation":{},"ISSN":["1462-2912","1462-2920"],"issn-type":[{"value":"1462-2912","type":"print"},{"value":"1462-2920","type":"electronic"}],"subject":[],"published":{"date-parts":[[2020,3,12]]},"assertion":[{"value":"2019-07-23","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2020-03-01","order":2,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2020-03-12","order":3,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}