{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,14]],"date-time":"2026-07-14T09:41:39Z","timestamp":1784022099805,"version":"3.55.0"},"reference-count":73,"publisher":"Wiley","issue":"6","license":[{"start":{"date-parts":[[2024,6,23]],"date-time":"2024-06-23T00:00:00Z","timestamp":1719100800000},"content-version":"vor","delay-in-days":22,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100000038","name":"Natural Sciences and Engineering Research Council of Canada","doi-asserted-by":"publisher","award":["ALLRP 560330 \u2010 20"],"award-info":[{"award-number":["ALLRP 560330 \u2010 20"]}],"id":[{"id":"10.13039\/501100000038","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100000038","name":"Natural Sciences and Engineering Research Council of Canada","doi-asserted-by":"publisher","award":["RDCPJ493474\u201015"],"award-info":[{"award-number":["RDCPJ493474\u201015"]}],"id":[{"id":"10.13039\/501100000038","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["enviromicro-journals.onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["Environmental Microbiology"],"published-print":{"date-parts":[[2024,6]]},"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:p>\n                    Methyl mercury, a toxic compound, is produced by anaerobic microbes and magnifies in aquatic food webs, affecting the health of animals and humans. The exploration of mercury methylators based on genomes is still limited, especially in the context of river ecosystems. To address this knowledge gap, we developed a genome catalogue of potential mercury\u2010methylating microorganisms. This was based on the presence of\n                    <jats:italic>hgcAB<\/jats:italic>\n                    from the sediments of a river affected by two run\u2010of\u2010river hydroelectric dams, logging activities and a wildfire. Through the use of genome\u2010resolved metagenomics, we discovered a unique and diverse group of mercury methylators. These were dominated by members of the metabolically versatile Bacteroidota and were particularly rich in microbes that ferment butyrate. By comparing the diversity and abundance of mercury methylators between sites subjected to different disturbances, we found that ongoing disturbances, such as the input of organic matter related to logging activities, were particularly conducive to the establishment of a mercury\u2010methylating niche. Finally, to gain a deeper understanding of the environmental factors that shape the diversity of mercury methylators, we compared the mercury\u2010methylating genome catalogue with the broader microbial community. The results suggest that mercury methylators respond to environmental conditions in a manner similar to the overall microbial community. Therefore, it is crucial to interpret the diversity and abundance of mercury methylators within their specific ecological context.\n                  <\/jats:p>","DOI":"10.1111\/1462-2920.16669","type":"journal-article","created":{"date-parts":[[2024,6,23]],"date-time":"2024-06-23T18:29:55Z","timestamp":1719167395000},"update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":7,"title":["A genome catalogue of mercury\u2010methylating bacteria and archaea from sediments of a boreal river facing human disturbances"],"prefix":"10.1111","volume":"26","author":[{"ORCID":"https:\/\/orcid.org\/0009-0008-3905-4766","authenticated-orcid":false,"given":"Charl\u00e8ne","family":"Lawruk\u2010Desjardins","sequence":"first","affiliation":[{"name":"Department of Biology Concordia University  Montreal Quebec Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Veronika","family":"Storck","sequence":"additional","affiliation":[{"name":"Department of Biology Concordia University  Montreal Quebec Canada"},{"name":"D\u00e9partement de sciences biologiques Universit\u00e9 de Montr\u00e9al  Montreal Quebec Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Dominic E.","family":"Ponton","sequence":"additional","affiliation":[{"name":"D\u00e9partement de sciences biologiques Universit\u00e9 de Montr\u00e9al  Montreal Quebec Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Marc","family":"Amyot","sequence":"additional","affiliation":[{"name":"D\u00e9partement de sciences biologiques Universit\u00e9 de Montr\u00e9al  Montreal Quebec Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"David A.","family":"Walsh","sequence":"additional","affiliation":[{"name":"Department of Biology Concordia University  Montreal Quebec Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2024,6,23]]},"reference":[{"key":"e_1_2_10_2_1","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.2579"},{"key":"e_1_2_10_3_1","doi-asserted-by":"publisher","DOI":"10.1111\/wej.12101"},{"key":"e_1_2_10_4_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btz859"},{"key":"e_1_2_10_5_1","doi-asserted-by":"publisher","DOI":"10.1146\/annurev-marine-032020-014552"},{"key":"e_1_2_10_6_1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/27.19.3911"},{"key":"e_1_2_10_7_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btu170"},{"key":"e_1_2_10_8_1","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.3893"},{"key":"e_1_2_10_9_1","doi-asserted-by":"publisher","DOI":"10.1038\/ncomms14255"},{"key":"e_1_2_10_10_1","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.3176"},{"key":"e_1_2_10_11_1","doi-asserted-by":"publisher","DOI":"10.1021\/acs.est.6b04447"},{"key":"e_1_2_10_12_1","doi-asserted-by":"publisher","DOI":"10.1021\/acs.est.2c03784"},{"key":"e_1_2_10_13_1","doi-asserted-by":"publisher","DOI":"10.1111\/1755-0998.13687"},{"key":"e_1_2_10_14_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btac672"},{"key":"e_1_2_10_15_1","doi-asserted-by":"publisher","DOI":"10.1128\/aem.60.11.4072-4077.1994"},{"key":"e_1_2_10_16_1","doi-asserted-by":"publisher","DOI":"10.1128\/aem.50.2.498-502.1985"},{"key":"e_1_2_10_17_1","doi-asserted-by":"publisher","DOI":"10.1038\/s42003-020-1047-5"},{"key":"e_1_2_10_18_1","doi-asserted-by":"publisher","DOI":"10.1093\/gigascience\/giab008"},{"key":"e_1_2_10_19_1","doi-asserted-by":"publisher","DOI":"10.1306\/74d729d2-2b21-11d7-8648000102c1865d"},{"key":"e_1_2_10_20_1","doi-asserted-by":"publisher","DOI":"10.1002\/etc.1859"},{"key":"e_1_2_10_21_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.jenvman.2020.111528"},{"key":"e_1_2_10_22_1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkv397"},{"key":"e_1_2_10_23_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bts565"},{"key":"e_1_2_10_24_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0097435"},{"key":"e_1_2_10_25_1","doi-asserted-by":"publisher","DOI":"10.1128\/mBio.02403-17"},{"key":"e_1_2_10_26_1","doi-asserted-by":"publisher","DOI":"10.1021\/es403075t"},{"key":"e_1_2_10_27_1","doi-asserted-by":"publisher","DOI":"10.1128\/aem.01768-22"},{"key":"e_1_2_10_28_1","doi-asserted-by":"publisher","DOI":"10.1007\/s11356-015-4273-5"},{"key":"e_1_2_10_29_1","doi-asserted-by":"publisher","DOI":"10.3762\/bjoc.15.283"},{"key":"e_1_2_10_30_1","doi-asserted-by":"publisher","DOI":"10.3961\/jpmph.2012.45.6.353"},{"key":"e_1_2_10_31_1","doi-asserted-by":"publisher","DOI":"10.1007\/s13280-017-1006-7"},{"key":"e_1_2_10_32_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41396-019-0376-1"},{"key":"e_1_2_10_33_1","doi-asserted-by":"publisher","DOI":"10.7717\/peerj.7359"},{"key":"e_1_2_10_34_1","doi-asserted-by":"publisher","DOI":"10.1128\/aem.01602-06"},{"key":"e_1_2_10_35_1","doi-asserted-by":"publisher","DOI":"10.4319\/lo.2014.59.2.0548"},{"key":"e_1_2_10_36_1","doi-asserted-by":"publisher","DOI":"10.1002\/fee.2049"},{"key":"e_1_2_10_37_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41396-021-01057-y"},{"key":"e_1_2_10_38_1","doi-asserted-by":"publisher","DOI":"10.5061\/dryad.9zw3r22mz"},{"key":"e_1_2_10_39_1","doi-asserted-by":"publisher","DOI":"10.1128\/mSphere.00021-21"},{"key":"e_1_2_10_40_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.ymeth.2016.02.020"},{"key":"e_1_2_10_41_1","article-title":"Aligning sequence reads, clone sequences and assembly contigs with BWA\u2010MEM","author":"Li H.","year":"2013","journal-title":"ArXiv"},{"key":"e_1_2_10_42_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41396-020-00889-4"},{"key":"e_1_2_10_43_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.watres.2022.119204"},{"key":"e_1_2_10_44_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1574-6968.2009.01514.x"},{"key":"e_1_2_10_45_1","doi-asserted-by":"publisher","DOI":"10.1128\/mSystems.00299-20"},{"key":"e_1_2_10_46_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.scitotenv.2021.145686"},{"key":"e_1_2_10_47_1","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-015-0611-7"},{"key":"e_1_2_10_48_1","doi-asserted-by":"publisher","DOI":"10.1007\/s13280-017-1004-9"},{"key":"e_1_2_10_49_1","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2017.126"},{"key":"e_1_2_10_50_1","doi-asserted-by":"publisher","DOI":"10.1128\/msystems.00731-00719"},{"key":"e_1_2_10_51_1","doi-asserted-by":"publisher","DOI":"10.1101\/gr.186072.114"},{"key":"e_1_2_10_52_1","doi-asserted-by":"publisher","DOI":"10.1126\/science.1230667"},{"key":"e_1_2_10_53_1","doi-asserted-by":"publisher","DOI":"10.1111\/1462-2920.16364"},{"key":"e_1_2_10_54_1","doi-asserted-by":"publisher","DOI":"10.1021\/acs.est.0c05435"},{"key":"e_1_2_10_55_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41396-023-01482-1"},{"key":"e_1_2_10_56_1","doi-asserted-by":"publisher","DOI":"10.1126\/sciadv.1500675"},{"key":"e_1_2_10_57_1","doi-asserted-by":"publisher","DOI":"10.1021\/acs.est.0c07015"},{"key":"e_1_2_10_58_1","doi-asserted-by":"publisher","DOI":"10.1021\/es60099a006"},{"key":"e_1_2_10_59_1","doi-asserted-by":"publisher","DOI":"10.1046\/j.1365-2427.1998.00372.x"},{"key":"e_1_2_10_60_1","doi-asserted-by":"publisher","DOI":"10.1002\/pmic.201700479"},{"key":"e_1_2_10_61_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.ese.2023.100359"},{"key":"e_1_2_10_62_1","doi-asserted-by":"publisher","DOI":"10.1021\/acs.est.8b02709"},{"key":"e_1_2_10_63_1","doi-asserted-by":"publisher","DOI":"10.1111\/1462-2920.15112"},{"key":"e_1_2_10_64_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btu153"},{"key":"e_1_2_10_65_1","doi-asserted-by":"publisher","DOI":"10.1002\/eco.2247"},{"key":"e_1_2_10_66_1","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2011.00093"},{"key":"e_1_2_10_67_1","doi-asserted-by":"publisher","DOI":"10.1080\/20016491089226"},{"key":"e_1_2_10_68_1","doi-asserted-by":"publisher","DOI":"10.1186\/s40168-018-0548-7"},{"key":"e_1_2_10_69_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41522-021-00255-y"},{"key":"e_1_2_10_70_1","doi-asserted-by":"publisher","DOI":"10.1099\/ijsem.0.004213"},{"key":"e_1_2_10_71_1","unstructured":"Woodcroft BenJ Samuel TNAroney RossenZhao MitchellCunningham.2024.https:\/\/github.com\/wwood\/singlem"},{"key":"e_1_2_10_72_1","doi-asserted-by":"publisher","DOI":"10.1128\/aem.01556-13"},{"key":"e_1_2_10_73_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41396-023-01360-w"},{"key":"e_1_2_10_74_1","doi-asserted-by":"publisher","DOI":"10.1128\/msystems.00736-22"}],"container-title":["Environmental Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/sfamjournals.onlinelibrary.wiley.com\/doi\/pdf\/10.1111\/1462-2920.16669","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,10,30]],"date-time":"2025-10-30T22:39:47Z","timestamp":1761863987000},"score":1,"resource":{"primary":{"URL":"https:\/\/sfamjournals.onlinelibrary.wiley.com\/doi\/10.1111\/1462-2920.16669"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,6]]},"references-count":73,"journal-issue":{"issue":"6","published-print":{"date-parts":[[2024,6]]}},"alternative-id":["10.1111\/1462-2920.16669"],"URL":"https:\/\/doi.org\/10.1111\/1462-2920.16669","archive":["Portico"],"relation":{},"ISSN":["1462-2912","1462-2920"],"issn-type":[{"value":"1462-2912","type":"print"},{"value":"1462-2920","type":"electronic"}],"subject":[],"published":{"date-parts":[[2024,6]]},"assertion":[{"value":"2023-12-18","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2024-05-23","order":2,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2024-06-23","order":3,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}],"article-number":"e16669"}}