{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,29]],"date-time":"2026-09-29T20:37:58Z","timestamp":1790714278035,"version":"4.1.0"},"reference-count":62,"publisher":"Wiley","issue":"4","license":[{"start":{"date-parts":[[2019,6,20]],"date-time":"2019-06-20T00:00:00Z","timestamp":1560988800000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/onlinelibrary.wiley.com\/termsAndConditions#vor"}],"content-domain":{"domain":["enviromicro-journals.onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["Environ Microbiol Rep"],"published-print":{"date-parts":[[2019,8]]},"abstract":"<jats:title>Summary<\/jats:title>\n                  <jats:p>\n                    Teleost fishes interact with diverse microbial communities, playing crucial functions for host fitness. While gut microbiome has been extensively studied, skin microbiome has been overlooked. Specifically, there is no assessment of the relative impact of host and environmental factors on microbiome variability as well as neutral processes shaping fish skin microbiome. Here, we assessed the skin microbiome of a Siluriforme, the European catfish (\n                    <jats:italic>Silurus glanis<\/jats:italic>\n                    ) sampled in four sites located in Southwestern France. We assessed the relative roles of individual features (body size and genetic background), local environment and neutral processes in shaping skin microbiome. Catfish skin microbiome composition was distinct to that of other freshwater fish species previously studied with high abundances of\n                    <jats:italic>Gammaproteobacteria<\/jats:italic>\n                    and\n                    <jats:italic>Bacteroidetes<\/jats:italic>\n                    . We found no effect of catfish individual genotype and body size on the structure of its associated skin microbiome. Geographical location was the best catfish skin microbiome structure predictor, together with neutral models of microbiome assembly.\n                  <\/jats:p>","DOI":"10.1111\/1758-2229.12774","type":"journal-article","created":{"date-parts":[[2019,6,4]],"date-time":"2019-06-04T13:15:33Z","timestamp":1559654133000},"page":"605-614","update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":47,"title":["Environmental conditions and neutral processes shape the skin microbiome of European catfish (\n                    <i>Silurus glanis<\/i>\n                    ) populations of Southwestern France"],"prefix":"10.1111","volume":"11","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6588-7077","authenticated-orcid":false,"given":"Marl\u00e8ne","family":"Chiarello","sequence":"first","affiliation":[{"name":"EcoLab, Laboratoire \u00c9cologie Fonctionnelle et Environnement Universit\u00e9 de Toulouse, CNRS  Toulouse France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ivan","family":"Paz\u2010Vinas","sequence":"additional","affiliation":[{"name":"EcoLab, Laboratoire \u00c9cologie Fonctionnelle et Environnement Universit\u00e9 de Toulouse, CNRS  Toulouse France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Charlotte","family":"Veyssi\u00e8re","sequence":"additional","affiliation":[{"name":"EDB, Laboratoire \u00c9volution et Diversit\u00e9 Biologique Universit\u00e9 de Toulouse, CNRS, ENSFEA, IRD  Toulouse France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fr\u00e9d\u00e9ric","family":"Santoul","sequence":"additional","affiliation":[{"name":"EcoLab, Laboratoire \u00c9cologie Fonctionnelle et Environnement Universit\u00e9 de Toulouse, CNRS  Toulouse France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"G\u00e9raldine","family":"Loot","sequence":"additional","affiliation":[{"name":"EDB, Laboratoire \u00c9volution et Diversit\u00e9 Biologique Universit\u00e9 de Toulouse, CNRS, ENSFEA, IRD  Toulouse France"},{"name":"Institut Universitaire de France (IUF)  Paris France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jessica","family":"Ferriol","sequence":"additional","affiliation":[{"name":"EcoLab, Laboratoire \u00c9cologie Fonctionnelle et Environnement Universit\u00e9 de Toulouse, CNRS  Toulouse France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"St\u00e9phanie","family":"Boul\u00eatreau","sequence":"additional","affiliation":[{"name":"EcoLab, Laboratoire \u00c9cologie Fonctionnelle et Environnement Universit\u00e9 de Toulouse, CNRS  Toulouse France"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2019,6,20]]},"reference":[{"key":"e_1_2_5_2_1","doi-asserted-by":"publisher","DOI":"10.1111\/2041-210X.12158"},{"key":"e_1_2_5_3_1","doi-asserted-by":"publisher","DOI":"10.1086\/600101"},{"key":"e_1_2_5_4_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1442-9993.2001.01070.pp.x"},{"key":"e_1_2_5_5_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-319-32674-0"},{"key":"e_1_2_5_6_1","doi-asserted-by":"publisher","DOI":"10.1152\/ajpregu.00300.2009"},{"key":"e_1_2_5_7_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.vetmic.2006.01.009"},{"key":"e_1_2_5_8_1","doi-asserted-by":"publisher","DOI":"10.1214\/aos\/1013699998"},{"key":"e_1_2_5_9_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0196046"},{"key":"e_1_2_5_10_1","doi-asserted-by":"publisher","DOI":"10.1002\/ecs2.1606"},{"key":"e_1_2_5_11_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.vetmic.2011.09.002"},{"key":"e_1_2_5_12_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0084772"},{"key":"e_1_2_5_13_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0102649"},{"key":"e_1_2_5_14_1","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2015.142"},{"key":"e_1_2_5_15_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1000072107"},{"key":"e_1_2_5_16_1","unstructured":"Chen J.andORPHANED M.(2012) Package \u2018GUniFrac.\u2019"},{"key":"e_1_2_5_17_1","doi-asserted-by":"publisher","DOI":"10.1186\/s40168-018-0530-4"},{"key":"e_1_2_5_18_1","doi-asserted-by":"publisher","DOI":"10.1093\/femsec\/fiv061"},{"key":"e_1_2_5_19_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1467-2979.2008.00321.x"},{"key":"e_1_2_5_20_1","doi-asserted-by":"publisher","DOI":"10.1126\/science.1224203"},{"key":"e_1_2_5_21_1","doi-asserted-by":"publisher","DOI":"10.1007\/s11160-017-9507-9"},{"key":"e_1_2_5_22_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1654-1103.2003.tb02228.x"},{"key":"e_1_2_5_23_1","doi-asserted-by":"publisher","DOI":"10.5402\/2012\/853470"},{"key":"e_1_2_5_24_1","doi-asserted-by":"publisher","DOI":"10.1046\/j.1365-294X.2003.01702.x"},{"key":"e_1_2_5_25_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1209920109"},{"key":"e_1_2_5_26_1","unstructured":"Giraudoux P.(2011) pgirmess: Data analysis in ecology R package version 1.4. 5."},{"key":"e_1_2_5_27_1","volume-title":"The Unified Neutral Theory of Biodiversity and Biogeography (MPB\u201032)","author":"Hubbell S.P.","year":"2001"},{"key":"e_1_2_5_28_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1206721109"},{"key":"e_1_2_5_29_1","doi-asserted-by":"publisher","DOI":"10.7717\/peerj.281"},{"key":"e_1_2_5_30_1","doi-asserted-by":"publisher","DOI":"10.3389\/fimmu.2017.00559"},{"key":"e_1_2_5_31_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41559-017-0340-2"},{"key":"e_1_2_5_32_1","doi-asserted-by":"publisher","DOI":"10.1111\/1574-6941.12136"},{"key":"e_1_2_5_33_1","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2017.02664"},{"key":"e_1_2_5_34_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1300926110"},{"key":"e_1_2_5_35_1","doi-asserted-by":"publisher","DOI":"10.1038\/srep43465"},{"key":"e_1_2_5_36_1","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.01826-15"},{"key":"e_1_2_5_37_1","doi-asserted-by":"crossref","unstructured":"Marcon E.andH\u00e9rault B.(2014) entropart: An R Package to Measure and Partition Diversity.","DOI":"10.18637\/jss.v067.i08"},{"key":"e_1_2_5_38_1","doi-asserted-by":"publisher","DOI":"10.1016\/B978-0-12-417186-2.00010-8"},{"key":"e_1_2_5_39_1","doi-asserted-by":"publisher","DOI":"10.1186\/s13567-015-0215-y"},{"key":"e_1_2_5_40_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.70.12.3321"},{"key":"e_1_2_5_41_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1469-1809.1983.tb00993.x"},{"key":"e_1_2_5_42_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1558-5646.1975.tb00807.x"},{"key":"e_1_2_5_43_1","doi-asserted-by":"publisher","DOI":"10.1002\/9781119174844"},{"key":"e_1_2_5_44_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0400706101"},{"key":"e_1_2_5_45_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2095.2012.00943.x"},{"key":"e_1_2_5_46_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0172856"},{"key":"e_1_2_5_47_1","doi-asserted-by":"publisher","DOI":"10.1051\/kmae:2001002"},{"key":"e_1_2_5_48_1","doi-asserted-by":"publisher","DOI":"10.1111\/mec.13177"},{"key":"e_1_2_5_49_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.tim.2014.01.011"},{"key":"e_1_2_5_50_1","unstructured":"Sieber M. Pita L. Weiland\u2010Br\u00e4uer N. Dirksen P. Wang J. Mortzfeld B. et al. (2018) The Neutral Metaorganism.bioRxiv367243."},{"key":"e_1_2_5_51_1","article-title":"The Kruskal\u2010Wallis one\u2010way analysis of variance by ranks","author":"Siegel S.","year":"1988","journal-title":"Nonparametric Statistics for the Behavioural Sciences"},{"key":"e_1_2_5_52_1","doi-asserted-by":"publisher","DOI":"10.1002\/0470011254"},{"key":"e_1_2_5_53_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1462-2920.2005.00956.x"},{"key":"e_1_2_5_54_1","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2015.64"},{"key":"e_1_2_5_55_1","doi-asserted-by":"publisher","DOI":"10.1038\/srep32032"},{"key":"e_1_2_5_56_1","doi-asserted-by":"publisher","DOI":"10.1007\/s00248-018-1252-7"},{"key":"e_1_2_5_57_1","doi-asserted-by":"publisher","DOI":"10.1046\/j.1365-294X.2002.01501.x"},{"key":"e_1_2_5_58_1","volume-title":"Le silure glane (Silurus glanis, L.) en France. Evolution de son aire de r\u00e9partition et pr\u00e9diction de son extension","author":"Valadou B.","year":"2007"},{"key":"e_1_2_5_59_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-017-16169-9"},{"key":"e_1_2_5_60_1","doi-asserted-by":"publisher","DOI":"10.1128\/mBio.02284-14"},{"key":"e_1_2_5_61_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2109.2009.02459.x"},{"key":"e_1_2_5_62_1","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.00691-18"},{"key":"e_1_2_5_63_1","doi-asserted-by":"publisher","DOI":"10.3389\/fimmu.2018.02972"}],"container-title":["Environmental Microbiology Reports"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.wiley.com\/onlinelibrary\/tdm\/v1\/articles\/10.1111%2F1758-2229.12774","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1111\/1758-2229.12774","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/full-xml\/10.1111\/1758-2229.12774","content-type":"application\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/sfamjournals.onlinelibrary.wiley.com\/doi\/pdf\/10.1111\/1758-2229.12774","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,10,31]],"date-time":"2025-10-31T04:50:20Z","timestamp":1761886220000},"score":1,"resource":{"primary":{"URL":"https:\/\/sfamjournals.onlinelibrary.wiley.com\/doi\/10.1111\/1758-2229.12774"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2019,6,20]]},"references-count":62,"journal-issue":{"issue":"4","published-print":{"date-parts":[[2019,8]]}},"alternative-id":["10.1111\/1758-2229.12774"],"URL":"https:\/\/doi.org\/10.1111\/1758-2229.12774","archive":["Portico"],"relation":{},"ISSN":["1758-2229","1758-2229"],"issn-type":[{"value":"1758-2229","type":"print"},{"value":"1758-2229","type":"electronic"}],"subject":[],"published":{"date-parts":[[2019,6,20]]},"assertion":[{"value":"2019-02-27","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2019-06-03","order":2,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2019-06-20","order":3,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}