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Here, we examined the dynamics and site\u2010specific assembly of soil and phyllosphere microbiomes in a rotational faba bean (\n                    <jats:styled-content style=\"fixed-case\">\n                      <jats:italic>Vicia faba<\/jats:italic>\n                    <\/jats:styled-content>\n                    ) and spring barley (\n                    <jats:styled-content style=\"fixed-case\">\n                      <jats:italic>Hordeum vulgare<\/jats:italic>\n                    <\/jats:styled-content>\n                    ) strip\u2010system during two seasons. Using bacterial 16S and fungal ITS amplicon sequencing, we analysed microbial communities across gradients from the centre towards strip edges. We found that phyllosphere microbiomes are more affected by strip\u2010cropping than soil microbiomes. Neighbouring crops harbour different microbial communities, but with increasing proximity, their phyllosphere microbiomes share more specific microbial taxa. Likewise, we observed gradient\u2010specific microbial distribution, including fungal pathogen taxa. For instance,\n                    <jats:italic>Puccinia<\/jats:italic>\n                    was more abundant in the centre of the spring barley strips and gradually declined towards the edge. Correlation and co\u2010occurrence network analyses revealed distinct microbial interaction patterns across soil and phyllosphere gradients. These networks were more resilient at the edge of the strips compared to central networks of spring barley. Altogether, our findings revealed neighbour\u2010effects modulating host\u2010associated microbiomes across strips that could be harnessed for designing optimal cropping systems, for example, to reduce leaf pathogens.\n                  <\/jats:p>","DOI":"10.1111\/1758-2229.70423","type":"journal-article","created":{"date-parts":[[2026,10,2]],"date-time":"2026-10-02T04:44:58Z","timestamp":1790916298000},"update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Neighbour Effects and Dynamics of Plant\u2010Associated Microbiomes in a Strip\u2010Crop System"],"prefix":"10.1111","volume":"18","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-3297-2459","authenticated-orcid":false,"given":"Enoch Narh","family":"Kudjordjie","sequence":"first","affiliation":[{"name":"Department of Agroecology, Faculty of Technical Sciences Aarhus University  Slagelse Denmark"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0054-4855","authenticated-orcid":false,"given":"Mette","family":"Vesterg\u00e5rd","sequence":"additional","affiliation":[{"name":"Department of Agroecology, Faculty of Technical Sciences Aarhus University  Slagelse Denmark"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-8696-9960","authenticated-orcid":false,"given":"Mesfin Tsegaye","family":"Gebremikael","sequence":"additional","affiliation":[{"name":"Department of Food Science\u2014Plant, Food &amp; Sustainability, Faculty of Technical Sciences Aarhus University  Aarhus Denmark"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Otto","family":"Nielsen","sequence":"additional","affiliation":[{"name":"Nordic Beet Research (NBR)  Holeby Denmark"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0407-2488","authenticated-orcid":false,"given":"Mogens","family":"Nicolaisen","sequence":"additional","affiliation":[{"name":"Department of Agroecology, Faculty of Technical Sciences Aarhus University  Slagelse Denmark"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2026,10,1]]},"reference":[{"key":"e_1_2_13_2_1","doi-asserted-by":"publisher","DOI":"10.1111\/1365-2664.14161"},{"key":"e_1_2_13_3_1","doi-asserted-by":"publisher","DOI":"10.1128\/mbio.02825-21"},{"key":"e_1_2_13_4_1","doi-asserted-by":"publisher","DOI":"10.1111\/nph.17866"},{"key":"e_1_2_13_5_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.pbi.2020.02.010"},{"key":"e_1_2_13_6_1","doi-asserted-by":"publisher","DOI":"10.1016\/S0007-1536(77)80146-0"},{"issue":"7","key":"e_1_2_13_7_1","article-title":"Performance of 16s rDNA Primer Pairs in the Study of Rhizosphere and Endosphere Bacterial Microbiomes in Metabarcoding Studies","volume":"13","author":"Beckers B.","year":"2016","journal-title":"Frontiers in Microbiology"},{"key":"e_1_2_13_8_1","doi-asserted-by":"publisher","DOI":"10.1111\/gcb.15747"},{"key":"e_1_2_13_9_1","first-page":"1","article-title":"Regional Biogeography Versus Intra\u2010Annual Dynamics of the Root and Soil Microbiome","volume":"18","author":"Bell\u2010Dereske L. 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