{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,25]],"date-time":"2026-10-25T05:04:33Z","timestamp":1792904673503,"version":"4.5.0"},"reference-count":89,"publisher":"Wiley","issue":"6","license":[{"start":{"date-parts":[[2024,7,4]],"date-time":"2024-07-04T00:00:00Z","timestamp":1720051200000},"content-version":"am","delay-in-days":366,"URL":"http:\/\/onlinelibrary.wiley.com\/termsAndConditions#am"},{"start":{"date-parts":[[2023,7,4]],"date-time":"2023-07-04T00:00:00Z","timestamp":1688428800000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/onlinelibrary.wiley.com\/termsAndConditions#vor"}],"funder":[{"DOI":"10.13039\/100000001","name":"National Science Foundation","doi-asserted-by":"publisher","award":["DEB\u20101754030"],"award-info":[{"award-number":["DEB\u20101754030"]}],"id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000001","name":"National Science Foundation","doi-asserted-by":"publisher","award":["IOS\u20102016141"],"award-info":[{"award-number":["IOS\u20102016141"]}],"id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["Cladistics"],"published-print":{"date-parts":[[2023,12]]},"abstract":"<jats:title>Abstract<\/jats:title><jats:p>Scorpions are ancient and historically renowned for their potent venom. Traditionally, the systematics of this group of arthropods was supported by morphological characters, until recent phylogenomic analyses (using RNAseq data) revealed most of the higher\u2010level taxa to be non\u2010monophyletic. While these phylogenomic hypotheses are stable for almost all lineages, some nodes have been hard to resolve due to minimal taxonomic sampling (e.g. family Chactidae). In the same line, it has been shown that some nodes in the Arachnid Tree of Life show disagreement between hypotheses generated using transcritptomes and other genomic sources such as the ultraconserved elements (UCEs). Here, we compared the phylogenetic signal of transcriptomes vs. UCEs by retrieving UCEs from new and previously published scorpion transcriptomes and genomes, and reconstructed phylogenies using both datasets independently. We reexamined the monophyly and phylogenetic placement of Chactidae, sampling an additional chactid species using both datasets. Our results showed that both sets of genome\u2010scale datasets recovered highly similar topologies, with Chactidae rendered paraphyletic owing to the placement of <jats:italic>Nullibrotheas allenii<\/jats:italic>. As a first step toward redressing the systematics of Chactidae, we establish the family Anuroctonidae (new family) to accommodate the genus <jats:italic>Anuroctonus<\/jats:italic>.<\/jats:p>","DOI":"10.1111\/cla.12551","type":"journal-article","created":{"date-parts":[[2023,7,4]],"date-time":"2023-07-04T12:53:52Z","timestamp":1688475232000},"page":"533-547","update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":22,"title":["Congruence between ultraconserved element\u2010based matrices and phylotranscriptomic datasets in the scorpion Tree of Life"],"prefix":"10.1111","volume":"39","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6062-282X","authenticated-orcid":false,"given":"Carlos E.","family":"Santib\u00e1\u00f1ez\u2010L\u00f3pez","sequence":"first","affiliation":[{"name":"Department of Biology Western Connecticut State University  Danbury CT 06810 USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andr\u00e9s A.","family":"Ojanguren\u2010Affilastro","sequence":"additional","affiliation":[{"name":"Divisi\u00f3n Aracnolog\u00eda Museo Argentino de Ciencias Naturales  Buenos Aires C1405DJR Argentina"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Matthew R.","family":"Graham","sequence":"additional","affiliation":[{"name":"Department of Biology Eastern Connecticut State University  Willimantic CT 06226 USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Prashant P.","family":"Sharma","sequence":"additional","affiliation":[{"name":"Department of Integrative Biology University of Wisconsin\u2014Madison  Madison WI 53706 USA"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2023,7,4]]},"reference":[{"key":"e_1_2_8_2_1","doi-asserted-by":"publisher","DOI":"10.1093\/sysbio\/syy085"},{"key":"e_1_2_8_3_1","doi-asserted-by":"publisher","DOI":"10.1093\/gbe\/evab161"},{"key":"e_1_2_8_4_1","doi-asserted-by":"publisher","DOI":"10.1016\/B978-0-12-138903-1.50019-3"},{"key":"e_1_2_8_5_1","doi-asserted-by":"publisher","DOI":"10.1093\/sysbio\/syz011"},{"key":"e_1_2_8_6_1","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msac021"},{"key":"e_1_2_8_7_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0161531"},{"key":"e_1_2_8_8_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.actatropica.2020.105346"},{"key":"e_1_2_8_9_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.ympev.2018.10.012"},{"key":"e_1_2_8_10_1","doi-asserted-by":"publisher","DOI":"10.1111\/jbi.12134"},{"key":"e_1_2_8_11_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp348"},{"key":"e_1_2_8_12_1","doi-asserted-by":"publisher","DOI":"10.1093\/oso\/9780195172348.003.0019"},{"key":"e_1_2_8_13_1","first-page":"1","article-title":"Venomics of the scorpion Tityus ocelote (Scorpiones, Buthidae): Understanding venom evolution in the subgenus Archaeotityus","volume":"29","author":"D\u00edaz C.","year":"2023","journal-title":"Int. J. Pept. Res. Ther."},{"key":"e_1_2_8_14_1","doi-asserted-by":"publisher","DOI":"10.1111\/1755-0998.13072"},{"key":"e_1_2_8_15_1","first-page":"133","article-title":"Phylogenomic re\u2010evaluation of Triaenonychoidea (Opiliones: Laniatores), and systematics of Triaenonychidae, including new families, genera and species","volume":"35","author":"Derkarabetian S.","year":"2021","journal-title":"Invertebr. Syst."},{"key":"e_1_2_8_16_1","first-page":"1","article-title":"The duration of copulation in spiders: comparative patterns","volume":"52","author":"Elgar M.A.","year":"1995","journal-title":"Rec. Aust. Mus."},{"key":"e_1_2_8_17_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-018-33754-8"},{"key":"e_1_2_8_18_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv646"},{"key":"e_1_2_8_19_1","doi-asserted-by":"publisher","DOI":"10.18590\/euscorpius.2003.vol2003.iss4.1"},{"key":"e_1_2_8_20_1","doi-asserted-by":"crossref","first-page":"1","DOI":"10.18590\/euscorpius.2005.vol2005.iss23.1","article-title":"A new trichobothrial character for the high\u2010level systematics of Buthoidea (Scorpiones: Buthida)","volume":"23","author":"Fet V.","year":"2005","journal-title":"Euscorpius"},{"key":"e_1_2_8_21_1","first-page":"233","article-title":"The family Iuridae Thorell (Arachnida, Scorpiones)","volume":"9","author":"Francke O.F.","year":"1981","journal-title":"J. Arachnol."},{"key":"e_1_2_8_22_1","doi-asserted-by":"publisher","DOI":"10.1098\/rspb.2021.1168"},{"key":"e_1_2_8_23_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1096-0031.2002.tb00140.x"},{"key":"e_1_2_8_24_1","doi-asserted-by":"publisher","DOI":"10.1111\/cla.12160"},{"key":"e_1_2_8_25_1","doi-asserted-by":"publisher","DOI":"10.1111\/cla.12091"},{"key":"e_1_2_8_26_1","doi-asserted-by":"publisher","DOI":"10.1093\/biolinnean\/blx058"},{"key":"e_1_2_8_27_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.jprot.2013.06.007"},{"key":"e_1_2_8_28_1","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msx281"},{"key":"e_1_2_8_29_1","doi-asserted-by":"publisher","DOI":"10.1017\/S1464793104006700"},{"key":"e_1_2_8_30_1","doi-asserted-by":"publisher","DOI":"10.1111\/1755-0998.12676"},{"key":"e_1_2_8_31_1","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.4285"},{"key":"e_1_2_8_32_1","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msz263"},{"key":"e_1_2_8_33_1","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/mst010"},{"key":"e_1_2_8_34_1","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msw124"},{"key":"e_1_2_8_35_1","doi-asserted-by":"publisher","DOI":"10.1101\/gr.229202. Article published online before March 2002"},{"key":"e_1_2_8_36_1","first-page":"1","article-title":"Revision der Scorpione. II. Scorpionidae und Bothriuridae","volume":"11","author":"Kraepelin K.","year":"1894","journal-title":"Beiheft zum Jahrbuch der Hamburgischen Wissenschaftlichen Anstalten"},{"key":"e_1_2_8_37_1","doi-asserted-by":"publisher","DOI":"10.1111\/1755-0998.13099"},{"key":"e_1_2_8_38_1","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msy125"},{"key":"e_1_2_8_39_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0112913"},{"key":"e_1_2_8_40_1","doi-asserted-by":"publisher","DOI":"10.1093\/isd\/ixac028"},{"key":"e_1_2_8_41_1","doi-asserted-by":"publisher","DOI":"10.1071\/PC18015"},{"key":"e_1_2_8_42_1","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msaa015"},{"key":"e_1_2_8_43_1","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msaa106"},{"key":"e_1_2_8_44_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv234"},{"key":"e_1_2_8_45_1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkt263"},{"key":"e_1_2_8_46_1","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msab151"},{"key":"e_1_2_8_47_1","doi-asserted-by":"publisher","DOI":"10.1111\/cla.12067"},{"key":"e_1_2_8_48_1","doi-asserted-by":"publisher","DOI":"10.1186\/s12983-017-0231-z"},{"key":"e_1_2_8_49_1","doi-asserted-by":"publisher","DOI":"10.1007\/s00427-019-00644-6"},{"key":"e_1_2_8_50_1","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msab038"},{"key":"e_1_2_8_51_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.ympev.2022.107622"},{"key":"e_1_2_8_52_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pbio.1000602"},{"key":"e_1_2_8_53_1","doi-asserted-by":"publisher","DOI":"10.1080\/00222939308677626"},{"key":"e_1_2_8_54_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1096-0031.2005.00073.x"},{"key":"e_1_2_8_55_1","doi-asserted-by":"publisher","DOI":"10.1071\/IS02016"},{"key":"e_1_2_8_56_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1096-0031.2009.00277.x"},{"key":"e_1_2_8_57_1","doi-asserted-by":"publisher","DOI":"10.1186\/s12862-015-0570-3"},{"key":"e_1_2_8_58_1","volume-title":"Species 2000 & ITIS Catalogue of Life, 2016 Annual Checklist","author":"Rein J.O.","year":"2022"},{"key":"e_1_2_8_59_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0178240"},{"key":"e_1_2_8_60_1","doi-asserted-by":"publisher","DOI":"10.1071\/IS14035"},{"key":"e_1_2_8_61_1","doi-asserted-by":"publisher","DOI":"10.3390\/toxins8010002"},{"key":"e_1_2_8_62_1","doi-asserted-by":"publisher","DOI":"10.1071\/IS16078"},{"key":"e_1_2_8_63_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.toxicon.2017.05.002"},{"key":"e_1_2_8_64_1","doi-asserted-by":"publisher","DOI":"10.7717\/peerj.5902"},{"key":"e_1_2_8_65_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.ympev.2019.02.021"},{"key":"e_1_2_8_66_1","doi-asserted-by":"publisher","DOI":"10.3390\/toxins11110637"},{"key":"e_1_2_8_67_1","doi-asserted-by":"publisher","DOI":"10.1071\/IS19033"},{"key":"e_1_2_8_68_1","doi-asserted-by":"publisher","DOI":"10.1093\/sysbio\/syac021"},{"key":"e_1_2_8_69_1","doi-asserted-by":"publisher","DOI":"10.1186\/s12915-017-0399-x"},{"key":"e_1_2_8_70_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1720193115"},{"key":"e_1_2_8_71_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.cub.2018.05.036"},{"key":"e_1_2_8_72_1","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msu235"},{"key":"e_1_2_8_73_1","doi-asserted-by":"publisher","DOI":"10.1098\/rspb.2014.0661"},{"key":"e_1_2_8_74_1","doi-asserted-by":"publisher","DOI":"10.1098\/rspb.2014.2953"},{"key":"e_1_2_8_75_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.ympev.2018.01.003"},{"key":"e_1_2_8_76_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1096-3642.2007.00284.x"},{"key":"e_1_2_8_77_1","first-page":"64","volume-title":"Biology of Scorpions","author":"Sissom W.D.","year":"1990"},{"key":"e_1_2_8_78_1","first-page":"1","article-title":"High\u2010level systematics and phylogeny of the extant scorpions (Scorpiones: Orthosterni)","volume":"11","author":"Soleglad M.E.","year":"2003","journal-title":"Euscorpius"},{"key":"e_1_2_8_79_1","first-page":"81","article-title":"The systematics of the scorpion subfamily Uroctoninae (Scorpiones: Chactidae)","volume":"10","author":"Soleglad M.E.","year":"2004","journal-title":"Rev. Iber. Aracnol."},{"key":"e_1_2_8_80_1","first-page":"107","article-title":"Revision and keys to the higher categories of Vejovidae","volume":"1","author":"Stahnke H.L.","year":"1974","journal-title":"J. Arachnol."},{"key":"e_1_2_8_81_1","doi-asserted-by":"publisher","DOI":"10.1111\/1755-0998.12621"},{"key":"e_1_2_8_82_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btab096"},{"key":"e_1_2_8_83_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.94.13.6815"},{"key":"e_1_2_8_84_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.ympev.2022.107511"},{"key":"e_1_2_8_85_1","doi-asserted-by":"publisher","DOI":"10.3390\/toxins5122456"},{"key":"e_1_2_8_86_1","first-page":"857","article-title":"Etude des caracteres utilises pour classer les familles et les genres de Scorpions (Arachnides). 1. La trichobothriotaxie en arachnologie. Sigles trichobothriaux et types de trichobothriotaxie chez les Scorpions","volume":"140","author":"Vachon M.","year":"1974","journal-title":"Bull. Mus. Nat. Hist. Nat. Paris"},{"key":"e_1_2_8_87_1","doi-asserted-by":"publisher","DOI":"10.1111\/1755-0998.12962"},{"key":"e_1_2_8_88_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1439-0469.1979.tb00694.x"},{"key":"e_1_2_8_89_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1096-0031.1998.tb00331.x"},{"key":"e_1_2_8_90_1","first-page":"107","article-title":"Descriptions of new species of North American Pedipalpi","volume":"1863","author":"Wood H.C.","year":"1863","journal-title":"Proc. Acad. Nat. Sci. Phila."}],"container-title":["Cladistics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/am-pdf\/10.1111\/cla.12551","content-type":"application\/pdf","content-version":"am","intended-application":"syndication"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1111\/cla.12551","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,11,16]],"date-time":"2023-11-16T04:42:49Z","timestamp":1700109769000},"score":1,"resource":{"primary":{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/cla.12551"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2023,7,4]]},"references-count":89,"journal-issue":{"issue":"6","published-print":{"date-parts":[[2023,12]]}},"alternative-id":["10.1111\/cla.12551"],"URL":"https:\/\/doi.org\/10.1111\/cla.12551","archive":["Portico"],"relation":{},"ISSN":["0748-3007","1096-0031"],"issn-type":[{"value":"0748-3007","type":"print"},{"value":"1096-0031","type":"electronic"}],"subject":[],"published":{"date-parts":[[2023,7,4]]},"assertion":[{"value":"2023-06-06","order":1,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2023-07-04","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}