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The oldest microbialites date back to the Archean and formed under globally anoxic conditions. Accordingly, modern microbialites developing under oxic conditions are limited analogs of their earliest predecessors. We discovered microbialites in the deep, seasonally anoxic water column of crater lakes Alchichica and Atexcac (Mexico). We studied the prokaryotic communities of plankton and microbialites from oxic and anoxic layers, alongside the temporal dynamics of microbialite communities incubated under strict continuous anoxia. 16S rRNA gene amplicon sequencing showed shifts in the relative abundance of taxa under anoxia, rather than changes in overall diversity. Regardless of their original depth, microbialite\u2010associated communities from oxic and anoxic zones converged after ~25\u2009weeks of laboratory exposure to a N\n                    <jats:sub>2<\/jats:sub>\n                    \u2010H\n                    <jats:sub>2<\/jats:sub>\n                    \u2010CO\n                    <jats:sub>2<\/jats:sub>\n                    (85:10:5) atmosphere. Sequences assigned to likely anoxygenic photosynthetic taxa, notably within the Alpha\u2010 and Gammaproteobacteria, together with phyla associated with sulfate\u2010reduction and other sulfur\u2010cycling bacteria, increased in relative abundance. We isolated seven bacterial strains under anoxia, some of them biomineralizing. Several of these strains were cyanobacteria affiliated with the Leptolyngbyales, suggesting that they either continue to perform oxygenic photosynthesis or, hypothetically, switch to H\n                    <jats:sub>2<\/jats:sub>\n                    S\u2010dependent anoxygenic photosynthesis. Our results indicate that these microbialite communities adapt to long\u2010term anoxia (more than 70\u2009weeks) under laboratory conditions, likely sustaining photosynthetic alkalinization and carbonate precipitation under such conditions.\n                  <\/jats:p>","DOI":"10.1111\/gbi.70064","type":"journal-article","created":{"date-parts":[[2026,9,11]],"date-time":"2026-09-11T04:26:28Z","timestamp":1789100788000},"update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Adaptation of Microbialite\u2010Associated Prokaryotic Communities to Natural and Experimental Anoxic Conditions"],"prefix":"10.1111","volume":"24","author":[{"ORCID":"https:\/\/orcid.org\/0009-0009-4921-8901","authenticated-orcid":false,"given":"Jeanne","family":"Caumartin","sequence":"first","affiliation":[{"name":"Ecologie Soci\u00e9t\u00e9 et Evolution, CNRS Universit\u00e9 Paris\u2010Saclay, AgroParisTech  Gif\u2010sur\u2010Yvette 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