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The comparative changes in thymic subsets under different modes of thymic atrophy and the mechanisms involved are not well characterized. These aspects were investigated, using mice infected with <jats:italic>Salmonella<\/jats:italic> Typhimurium, injection with lipopolysaccharide (<jats:styled-content style=\"fixed-case\">LPS<\/jats:styled-content>), an inflammatory but non\u2010infectious stimulus, etoposide (Eto), a drug used to treat some cancers, and dexamethasone (Dex), a steroid used in some inflammatory diseases. The effects on the major subpopulations of thymocytes based on multicolour flow cytometry studies were, first, the <jats:styled-content style=\"fixed-case\">CD<\/jats:styled-content>4<jats:sup>\u2212<\/jats:sup>\u00a0<jats:styled-content style=\"fixed-case\">CD<\/jats:styled-content>8<jats:sup>\u2212<\/jats:sup> double\u2010negative (<jats:styled-content style=\"fixed-case\">DN<\/jats:styled-content>) cells, mainly <jats:styled-content style=\"fixed-case\">DN<\/jats:styled-content>2\u20134, were reduced with infection, <jats:styled-content style=\"fixed-case\">LPS<\/jats:styled-content> and Eto treatment, but not with Dex. Second, the <jats:styled-content style=\"fixed-case\">CD<\/jats:styled-content>8<jats:sup>+<\/jats:sup>\u00a0<jats:styled-content style=\"fixed-case\">CD<\/jats:styled-content>3<jats:sup>lo<\/jats:sup> immature single\u2010positive cells (<jats:styled-content style=\"fixed-case\">ISP<\/jats:styled-content>s) were highly sensitive to infection, <jats:styled-content style=\"fixed-case\">LPS<\/jats:styled-content> and Eto, but not Dex. Third, treatment with <jats:styled-content style=\"fixed-case\">LPS<\/jats:styled-content>, Eto and Dex reduced all three subpopulations of <jats:styled-content style=\"fixed-case\">CD<\/jats:styled-content>4<jats:sup>+<\/jats:sup>\u00a0<jats:styled-content style=\"fixed-case\">CD<\/jats:styled-content>8<jats:sup>+<\/jats:sup> double\u2010positive (<jats:styled-content style=\"fixed-case\">DP<\/jats:styled-content>) thymocytes, i.e. <jats:styled-content style=\"fixed-case\">DP<\/jats:styled-content>1, <jats:styled-content style=\"fixed-case\">DP<\/jats:styled-content>2 and <jats:styled-content style=\"fixed-case\">DP<\/jats:styled-content>3, but the <jats:styled-content style=\"fixed-case\">DP<\/jats:styled-content>3 subset was relatively more resistant during infection. Fourth, both <jats:styled-content style=\"fixed-case\">CD<\/jats:styled-content>4<jats:sup>+<\/jats:sup> and <jats:styled-content style=\"fixed-case\">CD<\/jats:styled-content>8<jats:sup>+<\/jats:sup> single\u2010positive (<jats:styled-content style=\"fixed-case\">SP<\/jats:styled-content>) thymocytes were lowered by Eto and Dex, but not during infection. Notably, <jats:styled-content style=\"fixed-case\">LPS<\/jats:styled-content> lowered <jats:styled-content style=\"fixed-case\">CD<\/jats:styled-content>4<jats:sup>+<\/jats:sup> <jats:styled-content style=\"fixed-case\">SP<\/jats:styled-content> subsets, whereas the <jats:styled-content style=\"fixed-case\">CD<\/jats:styled-content>8<jats:sup>+<\/jats:sup> <jats:styled-content style=\"fixed-case\">SP<\/jats:styled-content> subsets were relatively more resistant. Interestingly, the reactive oxygen species quencher, <jats:italic>N<\/jats:italic>\u2010acetyl cysteine, greatly improved the survival of thymocytes, especially <jats:styled-content style=\"fixed-case\">DN<\/jats:styled-content>s, <jats:styled-content style=\"fixed-case\">ISP<\/jats:styled-content>s and <jats:styled-content style=\"fixed-case\">DP<\/jats:styled-content>s, during infection and <jats:styled-content style=\"fixed-case\">LPS<\/jats:styled-content> treatment. The implications of these observations for the development of potential thymopoietic drugs are discussed.<\/jats:p>","DOI":"10.1111\/imm.13043","type":"journal-article","created":{"date-parts":[[2019,1,19]],"date-time":"2019-01-19T20:19:53Z","timestamp":1547929193000},"page":"21-36","update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":17,"title":["Comparative analysis of thymic subpopulations during different modes of atrophy identifies the reactive oxygen species scavenger, <i>N<\/i>\u2010acetyl cysteine, to increase the survival of thymocytes during infection\u2010induced and lipopolysaccharide\u2010induced thymic atrophy"],"prefix":"10.1111","volume":"157","author":[{"given":"Shamik","family":"Majumdar","sequence":"first","affiliation":[{"name":"Department of Biochemistry Indian Institute of Science Bangalore 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