{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2023,5,8]],"date-time":"2023-05-08T00:40:23Z","timestamp":1683506423549},"reference-count":25,"publisher":"Oxford University Press (OUP)","issue":"1","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2006,9]]},"DOI":"10.1111\/j.1574-6968.2006.00366.x","type":"journal-article","created":{"date-parts":[[2006,7,7]],"date-time":"2006-07-07T10:24:20Z","timestamp":1152267860000},"page":"77-84","source":"Crossref","is-referenced-by-count":3,"title":["Identification of acquired DNA in<i>Neisseria lactamica<\/i>"],"prefix":"10.1093","volume":"262","author":[{"given":"Mark W.J.","family":"van Passel","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Aldert","family":"Bart","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Angela C.M.","family":"Luyf","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Antoine H.C.","family":"van Kampen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Arie","family":"van der Ende","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","reference":[{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB1","unstructured":"Casadevall A & Pirofski LA (1999) Host\u00e2\u0080\u0093pathogen interactions: redefining the basic concepts of virulence and pathogenicity. Infect Immun 67: 3703\u00e2\u0080\u00933713."},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB2","unstructured":"Casadevall A & Pirofski LA (2000) Host\u00e2\u0080\u0093pathogen interactions: basic concepts of microbial commensalism, colonization, infection, and disease. Infect Immun 68: 6511\u00e2\u0080\u00936518."},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB3","unstructured":"Coenye T & Vandamme P (2003) Extracting phylogenetic information from whole-genome sequencing projects: the lactic acid bacteria as a test case. Microbiology 149: 3507\u00e2\u0080\u00933517."},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB4","doi-asserted-by":"crossref","unstructured":"Correia FF , Inouye S & Inouye M (1988) A family of small repeated elements with some transposon-like properties in the genome of Neisseria gonorrhoeae. J Biol Chem 263: 12194\u00e2\u0080\u009312198.","DOI":"10.1016\/S0021-9258(18)37738-X"},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB5","doi-asserted-by":"crossref","unstructured":"Dobrindt U , Hochhut B , Hentschel U & Hacker J (2004) Genomic islands in pathogenic and environmental microorganisms. Nat Rev Microbiol 2: 414\u00e2\u0080\u0093424.","DOI":"10.1038\/nrmicro884"},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB6","doi-asserted-by":"crossref","unstructured":"Dougan DA , Mogk A , Zeth K , Turgay K & Bukau B (2002) AAA+ proteins and substrate recognition, it all depends on their partner in crime. FEBS Lett 529: 6\u00e2\u0080\u009310.","DOI":"10.1016\/S0014-5793(02)03179-4"},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB7","doi-asserted-by":"crossref","unstructured":"Garcia-Vallve S , Guzman E , Montero MA & Romeu A (2003) HGT-DB: a database of putative horizontally transferred genes in prokaryotic complete genomes. Nucleic Acids Res 31: 187\u00e2\u0080\u0093189.","DOI":"10.1093\/nar\/gkg004"},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB8","doi-asserted-by":"crossref","unstructured":"Karlin S (2001) Detecting anomalous gene clusters and pathogenicity islands in diverse bacterial genomes. Trends Microbiol 9: 335\u00e2\u0080\u0093343, 787.","DOI":"10.1016\/S0966-842X(01)02079-0"},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB9","unstructured":"Karlin S & Burge C (1995) Dinucleotide relative abundance extremes: a genomic signature. Trends Genet 11: 283\u00e2\u0080\u0093290."},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB10","doi-asserted-by":"crossref","unstructured":"Karlin S , Ladunga I & Blaisdell BE (1994) Heterogeneity of genomes: measures and values. Proc Natl Acad Sci USA 91: 12837\u00e2\u0080\u009312841.","DOI":"10.1073\/pnas.91.26.12837"},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB11","unstructured":"Korch C , Hagblom P , Ohman H , Goransson M & Normark S (1985) Cryptic plasmid of Neisseriagonorrhoeae: complete nucleotide sequence and genetic organization. J Bacteriol 163: 430\u00e2\u0080\u0093438."},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB12","unstructured":"Lawrence JG & Ochman H (1998) Molecular archaeology of the Escherichiacoli genome. Proc Natl Acad Sci USA 95: 9413\u00e2\u0080\u00939417."},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB13","doi-asserted-by":"crossref","unstructured":"Linz B , Schenker M , Zhu P & Achtman M (2000) Frequent interspecific genetic exchange between commensal Neisseriae and Neisseria meningitidis. Mol Microbiol 36: 1049\u00e2\u0080\u00931058.","DOI":"10.1046\/j.1365-2958.2000.01932.x"},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB14","doi-asserted-by":"crossref","unstructured":"Lisitsyn N , Lisitsyn N & Wigler M (1993) Cloning the differences between two complex genomes. Science 259: 946\u00e2\u0080\u0093951.","DOI":"10.1126\/science.8438152"},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB15","doi-asserted-by":"crossref","unstructured":"Nakamura Y , Itoh T , Matsuda H & Gojobori T (2004) Biased biological functions of horizontally transferred genes in prokaryotic genomes. Nat Genet 36: 760\u00e2\u0080\u0093766.","DOI":"10.1038\/ng1381"},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB16","unstructured":"Needleman SB & Wunsch CD (1970) A general method applicable to the search for similarities in the amino acid sequence of two proteins. J Mol Biol 48: 443\u00e2\u0080\u0093453."},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB17","unstructured":"Oliver KJ , Reddin KM , Bracegirdle P , Hudson MJ , Borrow R , Feavers IM , Robinson A , Cartwright K & Gorringe AR (2002) Neisserialactamica protects against experimental meningococcal infection. Infect Immun 70: 3621\u00e2\u0080\u00933626."},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB18","unstructured":"Parkhill J , Achtman M , James KD et al. (2000) Complete DNA sequence of a serogroup A strain of Neisseriameningitidis Z2491. Nature 404: 502\u00e2\u0080\u0093506."},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB19","unstructured":"Peak IR , Srikhanta Y , Dieckelmann M , Moxon ER & Jennings MP (2000) Identification and characterisation of a novel conserved outer membrane protein from Neisseriameningitidis. FEMS Immunol Med Microbiol 28: 329\u00e2\u0080\u0093334."},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB20","unstructured":"Straus D & Ausubel FM (1990) Genomic subtraction for cloning DNA corresponding to deletion mutations. Proc Natl Acad Sci USA 87: 1889\u00e2\u0080\u00931893."},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB21","unstructured":"Tettelin H , Saunders NJ , Heidelberg J et al. (2000) Complete genome sequence of Neisseriameningitidis serogroup B strain MC58. Science 287: 1809\u00e2\u0080\u00931815."},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB22","doi-asserted-by":"crossref","unstructured":"van der Ende A , Hopman CT & Dankert J (1999) Deletion of porA by recombination between clusters of repetitive extragenic palindromic sequences in Neisseria meningitidis. Infect Immun 67: 2928\u00e2\u0080\u00932934.","DOI":"10.1128\/IAI.67.6.2928-2934.1999"},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB23","doi-asserted-by":"crossref","unstructured":"van Passel MW , Bart A , Waaijer RJ , Luyf AC , van Kampen AH & van der Ende A (2004) An in vitro strategy for the selective isolation of anomalous DNA from prokaryotic genomes. Nucleic Acids Res 32: e114.","DOI":"10.1093\/nar\/gnh115"},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB24","unstructured":"van Passel MW , Luyf AC , van Kampen AH , Bart A & van der Ende A (2005) {delta}{rho}-Web, an online tool to assess composition similarity of individual nucleic acid sequences. Bioinformatics 21: 3053\u00e2\u0080\u00933055."},{"key":"10.1111\/j.1574-6968.2006.00366.x-BIB25","doi-asserted-by":"crossref","unstructured":"Welch RA , Burland V , Plunkett G III et al. (2002) Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli. Proc Natl Acad Sci USA 99: 17020\u00e2\u0080\u009317024.","DOI":"10.1073\/pnas.252529799"}],"container-title":["FEMS Microbiology Letters"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/femsle\/article-pdf\/262\/1\/77\/19121539\/262-1-77.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,5,8]],"date-time":"2023-05-08T00:09:02Z","timestamp":1683504542000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/femsle\/article-lookup\/doi\/10.1111\/j.1574-6968.2006.00366.x"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2006,9]]},"references-count":25,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2006,9]]}},"URL":"https:\/\/doi.org\/10.1111\/j.1574-6968.2006.00366.x","relation":{},"ISSN":["0378-1097","1574-6968"],"issn-type":[{"value":"0378-1097","type":"print"},{"value":"1574-6968","type":"electronic"}],"subject":[],"published":{"date-parts":[[2006,9]]}}}