{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,31]],"date-time":"2025-10-31T17:02:28Z","timestamp":1761930148776,"version":"3.40.5"},"reference-count":45,"publisher":"Oxford University Press (OUP)","issue":"1","license":[{"start":{"date-parts":[[2020,12,21]],"date-time":"2020-12-21T00:00:00Z","timestamp":1608508800000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/onlinelibrary.wiley.com\/termsAndConditions#vor"},{"start":{"date-parts":[[2020,12,21]],"date-time":"2020-12-21T00:00:00Z","timestamp":1608508800000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/doi.wiley.com\/10.1002\/tdm_license_1.1"}],"funder":[{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["31601967"],"award-info":[{"award-number":["31601967"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["J. Appl. Microbiol."],"published-print":{"date-parts":[[2021,7]]},"DOI":"10.1111\/jam.14961","type":"journal-article","created":{"date-parts":[[2020,12,10]],"date-time":"2020-12-10T17:16:32Z","timestamp":1607620592000},"page":"68-79","source":"Crossref","is-referenced-by-count":10,"title":["Spatial and temporal organization of jejunal microbiota in goats during animal development process"],"prefix":"10.1093","volume":"131","author":[{"given":"X.","family":"Zhang","sequence":"first","affiliation":[{"name":"CAS Key Laboratory of Agro\u2010ecological Processes in Subtropical Region National Engineering Laboratory for Pollution Control and Waste Utilization in Livestock and Poultry Production Hunan Provincial Key Laboratory of Animal Nutritional Physiology and Metabolic Process Institute of Subtropical Agriculture The Chinese Academy of Sciences Changsha Hunan P. R. China"},{"name":"University of the Chinese Academy of Sciences Beijing China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"J.","family":"Wu","sequence":"additional","affiliation":[{"name":"CAS Key Laboratory of Agro\u2010ecological Processes in Subtropical Region National Engineering Laboratory for Pollution Control and Waste Utilization in Livestock and Poultry Production Hunan Provincial Key Laboratory of Animal Nutritional Physiology and Metabolic Process Institute of Subtropical Agriculture The Chinese Academy of Sciences Changsha Hunan P. R. China"},{"name":"University of the Chinese Academy of Sciences Beijing China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"C.","family":"Zhou","sequence":"additional","affiliation":[{"name":"CAS Key Laboratory of Agro\u2010ecological Processes in Subtropical Region National Engineering Laboratory for Pollution Control and Waste Utilization in Livestock and Poultry Production Hunan Provincial Key Laboratory of Animal Nutritional Physiology and Metabolic Process Institute of Subtropical Agriculture The Chinese Academy of Sciences Changsha Hunan P. R. China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Z.","family":"Tan","sequence":"additional","affiliation":[{"name":"CAS Key Laboratory of Agro\u2010ecological Processes in Subtropical Region National Engineering Laboratory for Pollution Control and Waste Utilization in Livestock and Poultry Production Hunan Provincial Key Laboratory of Animal Nutritional Physiology and Metabolic Process Institute of Subtropical Agriculture The Chinese Academy of Sciences Changsha Hunan P. R. China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6064-2270","authenticated-orcid":false,"given":"J.","family":"Jiao","sequence":"additional","affiliation":[{"name":"CAS Key Laboratory of Agro\u2010ecological Processes in Subtropical Region National Engineering Laboratory for Pollution Control and Waste Utilization in Livestock and Poultry Production Hunan Provincial Key Laboratory of Animal Nutritional Physiology and Metabolic Process Institute of Subtropical Agriculture The Chinese Academy of Sciences Changsha Hunan P. R. China"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2020,12,21]]},"reference":[{"key":"e_1_2_8_2_1","doi-asserted-by":"publisher","DOI":"10.1017\/S0007114520000380"},{"key":"e_1_2_8_3_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.archoralbio.2020.104766"},{"key":"e_1_2_8_4_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0010667"},{"key":"e_1_2_8_5_1","doi-asserted-by":"crossref","first-page":"223","DOI":"10.3389\/fcimb.2020.00223","article-title":"Gut microbiota dysbiosis associated with altered production of short chain fatty acids in children with neurodevelopmental disorders","volume":"10","author":"Bojovic K.","year":"2020","journal-title":"Front Cell Infect Microbiol"},{"key":"e_1_2_8_6_1","doi-asserted-by":"crossref","first-page":"111","DOI":"10.1186\/s40168-018-0498-0","article-title":"Metabolomic signatures distinguish the impact of formula carbohydrates on disease outcome in a preterm piglet mode of NEC","volume":"6","author":"Call L.","year":"2018","journal-title":"BMC Microbiome"},{"key":"e_1_2_8_7_1","doi-asserted-by":"publisher","DOI":"10.1017\/S1751731119001617"},{"key":"e_1_2_8_8_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0076341"},{"key":"e_1_2_8_9_1","doi-asserted-by":"publisher","DOI":"10.1038\/nrmicro3552"},{"key":"e_1_2_8_10_1","doi-asserted-by":"publisher","DOI":"10.1152\/ajpgi.00170.2019"},{"key":"e_1_2_8_11_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btq461"},{"key":"e_1_2_8_12_1","article-title":"SINTAX: a simple non\u2010Bayesian taxonomy classifier for 16S and ITS sequences","author":"Edgar R.C.","year":"2016","journal-title":"BioRxiv"},{"key":"e_1_2_8_13_1","doi-asserted-by":"publisher","DOI":"10.1186\/s12866-014-0282-7"},{"key":"e_1_2_8_14_1","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.01114-14"},{"key":"e_1_2_8_15_1","doi-asserted-by":"publisher","DOI":"10.1136\/gutjnl-2011-301955"},{"key":"e_1_2_8_16_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.copbio.2014.09.005"},{"key":"e_1_2_8_17_1","doi-asserted-by":"crossref","DOI":"10.1128\/mSystems.00107-20","article-title":"Correlations between the composition of the bovine microbiota and vitamin B12 abundance","volume":"5","author":"Franco\u2010Lopez J.","year":"2020","journal-title":"mSystems"},{"key":"e_1_2_8_18_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.anaerobe.2014.08.010"},{"key":"e_1_2_8_19_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1467-985X.2010.00676_9.x"},{"key":"e_1_2_8_20_1","doi-asserted-by":"crossref","DOI":"10.3389\/fmicb.2017.02224","article-title":"Microbiome datasets are compositional: and this is not optional","volume":"8","author":"Gloor G.B.","year":"2017","journal-title":"Front Microbiol"},{"key":"e_1_2_8_21_1","doi-asserted-by":"crossref","first-page":"33","DOI":"10.1186\/s40104-018-0249-x","article-title":"Does intra\u2010ruminal nitrogen recycling waste valuable resources? A review of major players and their manipulation","volume":"9","author":"Hartinger T.","year":"2018","journal-title":"J Anim Sci Biotechnol"},{"key":"e_1_2_8_22_1","first-page":"14567","article-title":"Rumen microbial community composition varies with diet and host, but a core microbiome is found across a wide geographical range (vol 5, 14567, 2015)","volume":"6","author":"Henderson G.","year":"2016","journal-title":"Sci Rep\u2010Uk"},{"key":"e_1_2_8_23_1","doi-asserted-by":"publisher","DOI":"10.2527\/jas.2015-0081"},{"key":"e_1_2_8_24_1","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2016.01364"},{"key":"e_1_2_8_25_1","doi-asserted-by":"crossref","first-page":"1655","DOI":"10.3389\/fmicb.2017.01655","article-title":"Shifts in host mucosal innate immune function are associated with ruminal microbial succession in supplemental feeding and grazing goats at different ages","volume":"8","author":"Jiao J.","year":"2017","journal-title":"Front Microbiol"},{"key":"e_1_2_8_26_1","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jafc.7b05297"},{"key":"e_1_2_8_27_1","doi-asserted-by":"publisher","DOI":"10.1136\/gut.2010.223263"},{"key":"e_1_2_8_28_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.fm.2018.09.008"},{"key":"e_1_2_8_29_1","article-title":"Spatial heterogeneity of gut microbiota reveals multiple bacterial communities with distinct characteristics","volume":"4","author":"Lu H.P.","year":"2014","journal-title":"Sci Rep\u2010Uk"},{"key":"e_1_2_8_30_1","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.03864-13"},{"key":"e_1_2_8_31_1","doi-asserted-by":"crossref","DOI":"10.1186\/s42523-020-0020-4","article-title":"Late weaning is associated with increased microbial diversity and Faecalibacterium prausnitzii abundance in the fecal microbiota of piglets","volume":"2","author":"Massacci F.R.","year":"2020","journal-title":"Anim Microbiome"},{"key":"e_1_2_8_32_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0061217"},{"key":"e_1_2_8_33_1","doi-asserted-by":"publisher","DOI":"10.2527\/jas.2015-9839"},{"key":"e_1_2_8_34_1","doi-asserted-by":"publisher","DOI":"10.3168\/jds.2017-13859"},{"key":"e_1_2_8_35_1","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2010.161"},{"key":"e_1_2_8_36_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.imlet.2020.03.001"},{"key":"e_1_2_8_37_1","doi-asserted-by":"crossref","DOI":"10.1093\/femsec\/fiz203","article-title":"Investigating temporal microbial dynamics in the rumen of beef calves raised on two farms during early life","volume":"96","author":"O'Hara E.","year":"2020","journal-title":"FEMS Microbiol Ecol"},{"key":"e_1_2_8_38_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btu494"},{"key":"e_1_2_8_39_1","doi-asserted-by":"publisher","DOI":"10.1038\/nature18846"},{"key":"e_1_2_8_40_1","doi-asserted-by":"crossref","first-page":"11470","DOI":"10.3168\/jds.2018-15863","article-title":"Short communication: Metagenomic evaluation of skin biopsies of udder sores in dairy cows","volume":"102","author":"Sorge U.S.","year":"2019","journal-title":"J. Dairy Sci"},{"key":"e_1_2_8_41_1","doi-asserted-by":"publisher","DOI":"10.3168\/jds.2015-10351"},{"key":"e_1_2_8_42_1","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.00753-08"},{"key":"e_1_2_8_43_1","article-title":"Investigation and manipulation of metabolically active methanogen community composition during rumen development in black goats","volume":"7","author":"Wang Z.","year":"2017","journal-title":"Sci Rep\u2010Uk"},{"key":"e_1_2_8_44_1","doi-asserted-by":"publisher","DOI":"10.1007\/s00253-020-10662-4"},{"key":"e_1_2_8_45_1","article-title":"Human gut microbiota changes reveal the progression of glucose intolerance","volume":"8","author":"Zhang X.Y.","year":"2013","journal-title":"PLoS One"},{"key":"e_1_2_8_46_1","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2011.212"}],"container-title":["Journal of Applied Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1111\/jam.14961","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/full-xml\/10.1111\/jam.14961","content-type":"application\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1111\/jam.14961","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,2,14]],"date-time":"2023-02-14T09:34:18Z","timestamp":1676367258000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/jambio\/article\/131\/1\/68\/6716023"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020,12,21]]},"references-count":45,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2021,7]]}},"alternative-id":["10.1111\/jam.14961"],"URL":"https:\/\/doi.org\/10.1111\/jam.14961","archive":["Portico"],"relation":{},"ISSN":["1364-5072","1365-2672"],"issn-type":[{"type":"print","value":"1364-5072"},{"type":"electronic","value":"1365-2672"}],"subject":[],"published":{"date-parts":[[2020,12,21]]}}}