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Species introductions therefore provide opportunities to investigate repeated patterns of adaptation and introgression across replicated contact zones. Here, we investigate genetic parallelism between multiple introduced populations of the invasive marine mussel, <jats:italic>Mytilus galloprovincialis<\/jats:italic>, in the absence (South Africa and California) and presence of hybridization with a native congener (<jats:italic>Mytilus planulatus<\/jats:italic> in Batemans Bay and Sydney Harbour, Australia). Repeatability in post\u2010introduction differentiation from native\u2010range populations varied between genetically distinct Atlantic and Mediterranean lineages, with Atlantic\u2010derived introductions displaying high differentiation (max<jats:italic>F<\/jats:italic><jats:sub>ST<\/jats:sub>\u00a0&gt;\u00a00.4) and parallelism at outlier loci. Identification of long noncoding RNA transcripts (lncRNA) additionally allowed us to clarify that parallel responses are largely limited to protein\u2010coding loci, with lncRNAs likely evolving under evolutionary constraints. Comparisons of independent hybrid zones revealed differential introgression most strongly in Batemans Bay, with an excess of <jats:italic>M.\u00a0galloprovincialis<\/jats:italic> ancestry and resistance to introgression at loci differentiating parental lineages (<jats:italic>M.\u00a0planulatus<\/jats:italic> and Atlantic <jats:italic>M.\u00a0galloprovincialis<\/jats:italic>). Additionally, contigs putatively introgressed with divergent alleles from a closely related species, <jats:italic>Mytilus edulis,<\/jats:italic> showed stronger introgression asymmetries compared with genome\u2010wide trends and also diverged in parallel in both Atlantic\u2010derived introductions. These results suggest that divergent demographic histories experienced by introduced lineages, including pre\u2010introduction introgression, influence contemporary admixture dynamics. Our findings build on previous investigations reporting contributions of historical introgression to intrinsic reproductive architectures shared between marine lineages and illustrate that interspecific introgression history can shape differentiation between colonizing populations and their hybridization with native congeners.<\/jats:p>","DOI":"10.1111\/jeb.13746","type":"journal-article","created":{"date-parts":[[2020,11,30]],"date-time":"2020-11-30T03:41:20Z","timestamp":1606707680000},"page":"175-192","update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":17,"title":["Pre\u2010introduction introgression contributes to parallel differentiation and contrasting hybridization outcomes between invasive and native marine mussels"],"prefix":"10.1093","volume":"34","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6582-4236","authenticated-orcid":false,"given":"Iva","family":"Popovic","sequence":"first","affiliation":[{"name":"School of Biological Sciences University of Queensland St Lucia Qld Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1856-3197","authenticated-orcid":false,"given":"Nicolas","family":"Bierne","sequence":"additional","affiliation":[{"name":"Institut des Sciences de l'Evolution UMR 5554 Universit\u00e9 de Montpellier, CNRS\u2010IRD\u2010EPHE\u2010UM Montpellier France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-5111-8816","authenticated-orcid":false,"given":"Federico","family":"Gaiti","sequence":"additional","affiliation":[{"name":"Weill Cornell Medicine New York NY USA"},{"name":"New York Genome Center New York NY USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-7564-0868","authenticated-orcid":false,"given":"Milo\u0161","family":"Tanurd\u017ei\u0107","sequence":"additional","affiliation":[{"name":"School of Biological Sciences University of Queensland St Lucia Qld Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-5485-4197","authenticated-orcid":false,"given":"Cynthia","family":"Riginos","sequence":"additional","affiliation":[{"name":"School of Biological Sciences University of Queensland St Lucia Qld Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2020,12,14]]},"reference":[{"key":"e_1_2_8_2_1","doi-asserted-by":"publisher","DOI":"10.1101\/gr.094052.109"},{"key":"e_1_2_8_3_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.tree.2007.09.011"},{"key":"e_1_2_8_4_1","doi-asserted-by":"publisher","DOI":"10.1534\/g3.118.200292"},{"key":"e_1_2_8_5_1","first-page":"147","volume-title":"Characteristics and modes of origin of weeds","author":"Baker H. 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