{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,18]],"date-time":"2026-10-18T03:17:32Z","timestamp":1792293452462,"version":"4.4.0"},"reference-count":59,"publisher":"Wiley","issue":"6","license":[{"start":{"date-parts":[[2022,5,31]],"date-time":"2022-05-31T00:00:00Z","timestamp":1653955200000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["JIPB"],"published-print":{"date-parts":[[2022,6]]},"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:p>\n                    Pre\u2010harvest sprouting (PHS), which reduces grain yield and quality, is controlled by seed dormancy genes. Because few dormancy\u2010related genes have been cloned, the genetic basis of seed dormancy in rice (\n                    <jats:italic>Oryza sativa<\/jats:italic>\n                    L.) remains unclear. Here, we performed a genome\u2010wide association study and linkage mapping to dissect the genetic basis of seed dormancy in rice. Our findings suggest that\n                    <jats:italic>Seed Dormancy4<\/jats:italic>\n                    (\n                    <jats:italic>Sdr4<\/jats:italic>\n                    ), a central modulator of seed dormancy, integrates the abscisic acid and gibberellic acid signaling pathways at the transcriptional level. Haplotype analysis revealed that three\n                    <jats:italic>Sdr4<\/jats:italic>\n                    alleles in rice cultivars already existed in ancestral\n                    <jats:italic>Oryza rufipogon<\/jats:italic>\n                    accessions. Furthermore, like the\n                    <jats:italic>semi\u2010dwarf 1<\/jats:italic>\n                    (\n                    <jats:italic>SD1<\/jats:italic>\n                    ) and\n                    <jats:italic>Rc<\/jats:italic>\n                    loci,\n                    <jats:italic>Sdr4<\/jats:italic>\n                    underwent selection during the domestication and improvement of Asian cultivated rice. The distribution frequency of the\n                    <jats:italic>Sdr4\u2010n<\/jats:italic>\n                    allele in different locations in Asia is negatively associated with local annual temperature and precipitation. Finally, we developed functional molecular markers for\n                    <jats:italic>Sdr4<\/jats:italic>\n                    ,\n                    <jats:italic>SD1<\/jats:italic>\n                    , and\n                    <jats:italic>Rc<\/jats:italic>\n                    for use in molecular breeding. Our results provide clues about the molecular basis of\n                    <jats:italic>Sdr4\u2010<\/jats:italic>\n                    regulated seed dormancy. Moreover, these findings provide guidance for utilizing the favorable alleles of\n                    <jats:italic>Sdr4<\/jats:italic>\n                    and\n                    <jats:italic>Rc<\/jats:italic>\n                    to synergistically boost PHS resistance, yield, and quality in modern rice varieties.\n                  <\/jats:p>","DOI":"10.1111\/jipb.13266","type":"journal-article","created":{"date-parts":[[2022,4,20]],"date-time":"2022-04-20T08:33:13Z","timestamp":1650443593000},"page":"1246-1263","update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":48,"title":["<i>Sdr4<\/i>\n                    dominates pre\u2010harvest sprouting and facilitates adaptation to local climatic condition in Asian cultivated rice"],"prefix":"10.1111","volume":"64","author":[{"given":"Bo","family":"Zhao","sequence":"first","affiliation":[{"name":"Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences Shenzhen 518120 China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Hui","family":"Zhang","sequence":"additional","affiliation":[{"name":"Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences Shenzhen 518120 China"},{"name":"Shanxi Key Laboratory of Minor Crop Germplasm Innovation and Molecular Breeding, College of Life Sciences Shanxi Agricultural University Taigu 030801 China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tianxiao","family":"Chen","sequence":"additional","affiliation":[{"name":"Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences Shenzhen 518120 China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ling","family":"Ding","sequence":"additional","affiliation":[{"name":"Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences Shenzhen 518120 China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Liying","family":"Zhang","sequence":"additional","affiliation":[{"name":"Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences Shenzhen 518120 China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xiali","family":"Ding","sequence":"additional","affiliation":[{"name":"Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences Shenzhen 518120 China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jun","family":"Zhang","sequence":"additional","affiliation":[{"name":"Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences Shenzhen 518120 China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Qian","family":"Qian","sequence":"additional","affiliation":[{"name":"Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences Shenzhen 518120 China"},{"name":"State Key Laboratory of Rice Biology China National Rice Research 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