{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,13]],"date-time":"2026-08-13T13:27:55Z","timestamp":1786627675999,"version":"build-2736575974"},"reference-count":262,"publisher":"Wiley","license":[{"start":{"date-parts":[[2026,8,13]],"date-time":"2026-08-13T00:00:00Z","timestamp":1786579200000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/onlinelibrary.wiley.com\/termsAndConditions#vor"},{"start":{"date-parts":[[2026,8,13]],"date-time":"2026-08-13T00:00:00Z","timestamp":1786579200000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/doi.wiley.com\/10.1002\/tdm_license_1.1"}],"content-domain":{"domain":["onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["JIPB"],"abstract":"<jats:title>ABSTRACT<\/jats:title>\n                  <jats:p>\n                    Land plants must cope with the spatiotemporal heterogeneity of soil nutrients. During evolution, plants have developed sophisticated systems to perceive nutrient distribution and adaptively remodel their root system architecture (RSA) to maximize nutrient acquisition while minimizing energy expenditure. This process, referred to as nutrient foraging, involves local nutrient perception at the root, signal integration in the shoot, and subsequent RSA adjustment. Over the past decade, significant progress has been made in understanding how plants sense spatially heterogeneous nutrient availability and how systemic signals coordinate root development. Nitrogen (N) is a key limiting nutrient, often unevenly distributed in soils. Nitrate (NO\n                    <jats:sub>3<\/jats:sub>\n                    <jats:sup>\u2212<\/jats:sup>\n                    ), a predominant N source, displays pronounced heterogeneity in soils. To adapt to this heterogeneity, plants use nitrate transporters, small peptides, phytohormones, receptor\u2010like kinases (RLKs), microRNAs (miRNAs), mobile transcription factors, and amino acid signals as central regulators to mediate long\u2010distance bidirectional signaling between the root and the shoot, ultimately guiding RSA modulation to match whole\u2010plant nutritional demands. In legumes, systemic signaling pathways also regulate symbiotic nitrogen fixation. The product of symbiotic nitrogen fixation, ammonia (NH\n                    <jats:sub>3<\/jats:sub>\n                    )\/ammonium (NH\n                    <jats:sub>4<\/jats:sub>\n                    <jats:sup>+<\/jats:sup>\n                    ), represents a nitrogen form fundamentally distinct from nitrate. This review summarizes current understandings of nitrate foraging, from local sensing to systemic signaling, and discusses how these insights can be harnessed to optimize RSA and improve nitrogen use efficiency (NUE) in crops. By integrating these concepts, we provide a framework for designing nitrogen\u2010efficient crops adapted to heterogeneous soil environments.\n                  <\/jats:p>","DOI":"10.1111\/jipb.70367","type":"journal-article","created":{"date-parts":[[2026,8,13]],"date-time":"2026-08-13T12:30:17Z","timestamp":1786624217000},"update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Networks in plant nitrate foraging: From model plants to crop improvement"],"prefix":"10.1111","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-2254-6202","authenticated-orcid":false,"given":"Beibei","family":"Liu","sequence":"first","affiliation":[{"name":"Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations School of Life Sciences, Lanzhou University Lanzhou 730000 China"},{"name":"Gansu Key Laboratory of Gene Editing for Breeding School of Life Sciences, Lanzhou University Lanzhou 730000 China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0416-7479","authenticated-orcid":false,"given":"Xianming","family":"Fang","sequence":"additional","affiliation":[{"name":"Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations School of Life Sciences, Lanzhou University Lanzhou 730000 China"},{"name":"Gansu Key Laboratory of Gene Editing for Breeding School of Life Sciences, Lanzhou University Lanzhou 730000 China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0508-8411","authenticated-orcid":false,"given":"Kai","family":"He","sequence":"additional","affiliation":[{"name":"Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations School of Life Sciences, Lanzhou University Lanzhou 730000 China"},{"name":"Gansu Key Laboratory of Gene Editing for Breeding School of Life Sciences, Lanzhou University Lanzhou 730000 China"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2026,8,13]]},"reference":[{"key":"e_1_2_10_2_1","doi-asserted-by":"crossref","DOI":"10.1002\/imt2.247","article-title":"A comprehensive atlas of endogenous peptides in maize","volume":"3","author":"Ali U.","year":"2024","journal-title":"iMeta"},{"key":"e_1_2_10_3_1","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1111\/tpj.12618","article-title":"Systems approach identifies TGA1 and TGA4 transcription factors as important regulatory components of the nitrate response of Arabidopsis thaliana roots","volume":"80","author":"Alvarez J.M.","year":"2014","journal-title":"Plant J."},{"key":"e_1_2_10_4_1","doi-asserted-by":"crossref","first-page":"1157","DOI":"10.1038\/s41467-020-14979-6","article-title":"Transient genome\u2010wide interactions of the master transcription factor NLP7 initiate a rapid nitrogen\u2010response cascade","volume":"11","author":"Alvarez J.M.","year":"2020","journal-title":"Nat. Commun."},{"key":"e_1_2_10_5_1","doi-asserted-by":"crossref","first-page":"2029","DOI":"10.1073\/pnas.1319953111","article-title":"CLE\u2013CLAVATA1 peptide\u2010receptor signaling module regulates the expansion of plant root systems in a nitrogen\u2010dependent manner","volume":"111","author":"Araya T.","year":"2014","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"e_1_2_10_6_1","article-title":"Improving plant functional annotation from knowledge graphs using Graph Neural Networks","author":"Bao Ngo T.G.","year":"2025","journal-title":"bioRxiv"},{"key":"e_1_2_10_7_1","doi-asserted-by":"crossref","first-page":"934","DOI":"10.1093\/jxb\/erz475","article-title":"miR156\u2010targeted SPL10 controls Arabidopsis root meristem activity and root\u2010derived de novo shoot regeneration via cytokinin responses","volume":"71","author":"Barrera\u2010Rojas C.H.","year":"2020","journal-title":"J. Exp. Bot."},{"key":"e_1_2_10_8_1","doi-asserted-by":"crossref","DOI":"10.1016\/j.cpb.2025.100521","article-title":"Decoding stress specific transcriptional regulation by causality aware Graph\u2010Transformer deep learning","volume":"43","author":"Bhati U.","year":"2025","journal-title":"Curr. Plant Biol."},{"key":"e_1_2_10_9_1","doi-asserted-by":"crossref","DOI":"10.1016\/j.xplc.2024.100920","article-title":"Stress knowledge map: A knowledge graph resource for systems biology analysis of plant stress responses","volume":"5","author":"Bleker C.","year":"2024","journal-title":"Plant Commun."},{"key":"e_1_2_10_10_1","doi-asserted-by":"crossref","DOI":"10.1016\/j.xplc.2020.100078","article-title":"Local HY5 activity mediates hypocotyl growth and shoot\u2010to\u2010root communication","volume":"1","author":"Burko Y.","year":"2020","journal-title":"Plant Commun."},{"key":"e_1_2_10_11_1","doi-asserted-by":"crossref","first-page":"305","DOI":"10.1111\/tpj.13656","article-title":"Nitrate induction of root hair density is mediated by TGA1\/TGA4 and CPC transcription factors in Arabidopsis thaliana","volume":"92","author":"Canales J.","year":"2017","journal-title":"Plant J."},{"key":"e_1_2_10_12_1","doi-asserted-by":"crossref","first-page":"316","DOI":"10.1111\/pbi.14185","article-title":"ZmNRT1.1B (ZmNPF6.6) determines nitrogen use efficiency via regulation of nitrate transport and signalling in maize","volume":"22","author":"Cao H.","year":"2024","journal-title":"Plant Biotechnol. J."},{"key":"e_1_2_10_13_1","doi-asserted-by":"crossref","first-page":"1703","DOI":"10.3389\/fpls.2017.01703","article-title":"Overexpression of the maize ZmNLP6 and ZmNLP8 can complement the Arabidopsis nitrate regulatory mutant nlp7 by restoring nitrate signaling and assimilation","volume":"8","author":"Cao H.","year":"2017","journal-title":"Front. Plant Sci."},{"key":"e_1_2_10_14_1","doi-asserted-by":"crossref","DOI":"10.1093\/plphys\/kiag258","article-title":"A cytokinin\u2013auxin antagonistic module participates in nitrogen\u2010triggered tiller outgrowth in rice","volume":"201","author":"Chatterjee S.","year":"2026","journal-title":"Plant Physiol."},{"key":"e_1_2_10_15_1","doi-asserted-by":"crossref","first-page":"640","DOI":"10.1016\/j.cub.2015.12.066","article-title":"Shoot\u2010to\u2010root mobile transcription factor HY5 coordinates plant carbon and nitrogen acquisition","volume":"26","author":"Chen X.","year":"2016","journal-title":"Curr. Biol."},{"key":"e_1_2_10_16_1","doi-asserted-by":"crossref","first-page":"412","DOI":"10.1105\/tpc.105.038943","article-title":"Regulation of phosphate homeostasis by MicroRNA in Arabidopsis","volume":"18","author":"Chiou T.J.","year":"2006","journal-title":"Plant Cell"},{"key":"e_1_2_10_17_1","doi-asserted-by":"crossref","first-page":"902","DOI":"10.1111\/jipb.13035","article-title":"HBI1\u2013TCP20 interaction positively regulates the CEPs\u2010mediated systemic nitrate acquisition","volume":"63","author":"Chu X.Q.","year":"2021","journal-title":"J. Integr. Plant Biol."},{"key":"e_1_2_10_18_1","doi-asserted-by":"crossref","first-page":"80","DOI":"10.1186\/s13059-018-1459-4","article-title":"DeepCRISPR: Optimized CRISPR guide RNA design by deep learning","volume":"19","author":"Chuai G.","year":"2018","journal-title":"Genome Biol."},{"key":"e_1_2_10_19_1","doi-asserted-by":"crossref","first-page":"12","DOI":"10.1016\/j.tibtech.2016.06.008","article-title":"In silico meets in vivo: Towards computational CRISPR\u2010based sgRNA design","volume":"35","author":"Chuai G.","year":"2017","journal-title":"Trends Biotechnol."},{"key":"e_1_2_10_20_1","doi-asserted-by":"crossref","first-page":"332","DOI":"10.1111\/j.1365-313X.2004.02052.x","article-title":"The Arabidopsis transcription factor HY5 integrates light and hormone signaling pathways","volume":"38","author":"Cluis C.P.","year":"2004","journal-title":"Plant J."},{"key":"e_1_2_10_21_1","doi-asserted-by":"crossref","first-page":"1567","DOI":"10.1111\/j.1365-3040.2012.02510.x","article-title":"Molecular characterization of the Lotus japonicus NRT1(PTR) and NRT2 families","volume":"35","author":"Criscuolo G.","year":"2012","journal-title":"Plant Cell Environ."},{"key":"e_1_2_10_22_1","doi-asserted-by":"crossref","first-page":"108","DOI":"10.1111\/tpj.13234","article-title":"The systemic nodule number regulation kinase SUNN in Medicago truncatula interacts with MtCLV2 and MtCRN","volume":"88","author":"Crook A.D.","year":"2016","journal-title":"Plant J."},{"key":"e_1_2_10_23_1","doi-asserted-by":"crossref","first-page":"309","DOI":"10.1007\/s42994-024-00176-2","article-title":"Inference and prioritization of tissue\u2010specific regulons in Arabidopsis and Oryza","volume":"5","author":"Dai H.","year":"2024","journal-title":"aBIOTECH"},{"key":"e_1_2_10_24_1","doi-asserted-by":"crossref","DOI":"10.1242\/dev.200787","article-title":"Interactive CLV3, CLE16 and CLE17 signaling mediates stem cell homeostasis in the Arabidopsis shoot apical meristem","volume":"149","author":"Dao T.Q.","year":"2022","journal-title":"Development"},{"key":"e_1_2_10_25_1","doi-asserted-by":"crossref","first-page":"4763","DOI":"10.1093\/jxb\/erz270","article-title":"CEP3 levels affect starvation\u2010related growth responses of the primary root","volume":"70","author":"Delay C.","year":"2019","journal-title":"J. Exp. Bot."},{"key":"e_1_2_10_26_1","doi-asserted-by":"crossref","first-page":"479","DOI":"10.1111\/j.1469-8137.1975.tb01409.x","article-title":"Comparison of the effects of a localised supply of phosphate, nitrate, ammonium and potassium on the growth of the seminal root system, and the shoot, in barley","volume":"75","author":"Drew M.C.","year":"1975","journal-title":"New Phytol."},{"key":"e_1_2_10_27_1","doi-asserted-by":"crossref","first-page":"79","DOI":"10.1093\/jxb\/26.1.79","article-title":"Nutrient supply and the growth of the seminal root system in barley","volume":"26","author":"Drew M.C.","year":"1975","journal-title":"J. Exp. Bot."},{"key":"e_1_2_10_28_1","doi-asserted-by":"crossref","first-page":"1189","DOI":"10.1093\/jxb\/24.6.1189","article-title":"Nutrient supply and the growth of the seminal root system in barley","volume":"24","author":"Drew M.C.","year":"1973","journal-title":"J. Exp. Bot."},{"key":"e_1_2_10_29_1","doi-asserted-by":"crossref","DOI":"10.1073\/pnas.2609325123","article-title":"A long\u2010distance signaling loop promotes soybean nodulation and productivity","volume":"123","author":"Duan J.","year":"2026","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"e_1_2_10_30_1","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1007\/s11104-025-07593-2","article-title":"The role of glutaredoxins in regulating root function and development in response to environmental changes","volume":"515","author":"Dugout N.","year":"2025","journal-title":"Plant Soil"},{"key":"e_1_2_10_31_1","doi-asserted-by":"crossref","DOI":"10.1002\/pld3.227","article-title":"Glutaredoxin AtGRXS8 represses transcriptional and developmental responses to nitrate in Arabidopsis thaliana roots","volume":"4","author":"Ehrary A.","year":"2020","journal-title":"Plant Direct"},{"key":"e_1_2_10_32_1","doi-asserted-by":"crossref","first-page":"347","DOI":"10.1007\/s40502-026-00946-8","article-title":"Haplo\u2010pheno association for OsNRT1.1 paralog in rice reveals superior haplogroup with high nitrate uptake","volume":"31","author":"Elangovan D.","year":"2026","journal-title":"Plant Physiol. Rep"},{"key":"e_1_2_10_33_1","doi-asserted-by":"crossref","first-page":"1085","DOI":"10.1111\/pbi.12216","article-title":"The soybean (Glycine max) nodulation\u2010suppressive CLE peptide, GmRIC1, functions interspecifically in common white bean (Phaseolus vulgaris), but not in a supernodulating line mutated in the receptor PvNARK","volume":"12","author":"Ferguson B.J.","year":"2014","journal-title":"Plant Biotechnol. J."},{"key":"e_1_2_10_34_1","doi-asserted-by":"crossref","first-page":"352","DOI":"10.1016\/j.tplants.2020.11.006","article-title":"Sugar and nitrate sensing: A multi\u2010billion\u2010year story","volume":"26","author":"Fichtner F.","year":"2021","journal-title":"Trends Plant Sci."},{"key":"e_1_2_10_35_1","doi-asserted-by":"crossref","first-page":"682","DOI":"10.1111\/j.1365-3040.2008.01927.x","article-title":"Nitrate and glutamate as environmental cues for behavioural responses in plant roots","volume":"32","author":"Forde B.G.","year":"2009","journal-title":"Plant Cell Environ."},{"key":"e_1_2_10_36_1","doi-asserted-by":"crossref","first-page":"792","DOI":"10.1016\/j.tplants.2017.06.012","article-title":"Cytokinins in symbiotic nodulation: When, where, what for?","volume":"22","author":"Gamas P.","year":"2017","journal-title":"Trends Plant Sci."},{"key":"e_1_2_10_37_1","doi-asserted-by":"crossref","first-page":"1003","DOI":"10.1093\/pcp\/pcs050","article-title":"Overexpressing the ANR1 MADS\u2010box gene in transgenic plants provides new insights into its role in the nitrate regulation of root development","volume":"53","author":"Gan Y.","year":"2012","journal-title":"Plant Cell Physiol."},{"key":"e_1_2_10_38_1","doi-asserted-by":"crossref","first-page":"143","DOI":"10.1046\/j.1365-313x.2001.01016.x","article-title":"Differential regulation of the NO3\n                  \u2212 and NH4\n                  + transporter genes AtNrt2.1 and AtAmt1.1 in Arabidopsis: Relation with long\u2010distance and local controls by N status of the plant","volume":"26","author":"Gansel X.","year":"2001","journal-title":"Plant J."},{"key":"e_1_2_10_39_1","doi-asserted-by":"crossref","first-page":"171","DOI":"10.1016\/j.plaphy.2020.02.037","article-title":"High water uptake ability was associated with root aerenchyma formation in rice: Evidence from local ammonium supply under osmotic stress conditions","volume":"150","author":"Gao C.","year":"2020","journal-title":"Plant Physiol. Biochem."},{"key":"e_1_2_10_40_1","doi-asserted-by":"crossref","first-page":"1339","DOI":"10.1016\/j.cub.2020.01.084","article-title":"Compact Root Architecture 2 promotes root competence for nodulation through the miR2111 systemic effector","volume":"30","author":"Gautrat P.","year":"2020","journal-title":"Curr. Biol."},{"key":"e_1_2_10_41_1","doi-asserted-by":"crossref","first-page":"392","DOI":"10.1016\/j.tplants.2020.11.009","article-title":"Nitrogen systemic signaling: From symbiotic nodulation to root acquisition","volume":"26","author":"Gautrat P.","year":"2021","journal-title":"Trends Plant Sci."},{"key":"e_1_2_10_42_1","doi-asserted-by":"crossref","first-page":"1407","DOI":"10.1093\/jxb\/ery465","article-title":"Unraveling new molecular players involved in the autoregulation of nodulation in Medicago truncatula","volume":"70","author":"Gautrat P.","year":"2019","journal-title":"J. Exp. Bot."},{"key":"e_1_2_10_43_1","doi-asserted-by":"crossref","first-page":"95","DOI":"10.1007\/s10725-017-0324-x","article-title":"Genome\u2010wide analysis of maize NLP transcription factor family revealed the roles in nitrogen response","volume":"84","author":"Ge M.","year":"2018","journal-title":"Plant Growth Regul."},{"key":"e_1_2_10_44_1","doi-asserted-by":"crossref","first-page":"353","DOI":"10.1111\/tpj.14628","article-title":"The NIN\u2010like protein 5 (ZmNLP5) transcription factor is involved in modulating the nitrogen response in maize","volume":"102","author":"Ge M.","year":"2020","journal-title":"Plant J."},{"key":"e_1_2_10_45_1","doi-asserted-by":"crossref","first-page":"1762","DOI":"10.1016\/j.cj.2025.07.011","article-title":"The transcription factor ZmNLP5 increases maize grain yield by regulating nitrogen assimilation genes","volume":"13","author":"Ge M.","year":"2025","journal-title":"Crop J."},{"key":"e_1_2_10_46_1","doi-asserted-by":"crossref","DOI":"10.3389\/fpls.2021.660870","article-title":"Regulation of lateral root development by shoot\u2010sensed far\u2010red light via HY5 is nitrate\u2010dependent and involves the NRT2.1 nitrate transporter","volume":"12","author":"Gelderen K.","year":"2021","journal-title":"Front. Plant Sci."},{"key":"e_1_2_10_47_1","doi-asserted-by":"crossref","first-page":"101","DOI":"10.1105\/tpc.17.00771","article-title":"Far\u2010red light detection in the shoot regulates lateral root development through the HY5 transcription factor","volume":"30","author":"Gelderen K.","year":"2018","journal-title":"Plant Cell"},{"key":"e_1_2_10_48_1","doi-asserted-by":"crossref","first-page":"2531","DOI":"10.1093\/jxb\/erx013","article-title":"How do plants sense their nitrogen status?","volume":"68","author":"Gent L.","year":"2017","journal-title":"J. Exp. Bot."},{"key":"e_1_2_10_49_1","doi-asserted-by":"crossref","first-page":"803","DOI":"10.1073\/pnas.0709559105","article-title":"Cell\u2010specific nitrogen responses mediate developmental plasticity","volume":"105","author":"Gifford M.L.","year":"2008","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"e_1_2_10_50_1","doi-asserted-by":"crossref","first-page":"2299","DOI":"10.1093\/jxb\/erq419","article-title":"Nitrate transceptor(s) in plants","volume":"62","author":"Gojon A.","year":"2011","journal-title":"J. Exp. Bot."},{"key":"e_1_2_10_51_1","doi-asserted-by":"crossref","first-page":"16529","DOI":"10.1073\/pnas.0908122106","article-title":"Multiple feedback loops through cytokinin signaling control stem cell number within the shoot meristem","volume":"106","author":"Gordon S.P.","year":"2009","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"e_1_2_10_52_1","doi-asserted-by":"crossref","first-page":"641","DOI":"10.1016\/j.cj.2025.01.005","article-title":"Interplay of light and nitrogen for plant growth and development","volume":"13","author":"Guan C.","year":"2025","journal-title":"Crop J."},{"key":"e_1_2_10_53_1","doi-asserted-by":"crossref","first-page":"2419","DOI":"10.1073\/pnas.1615676114","article-title":"Interacting TCP and NLP transcription factors control plant responses to nitrate availability","volume":"114","author":"Guan P.Z.","year":"2017","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"e_1_2_10_54_1","doi-asserted-by":"crossref","first-page":"15267","DOI":"10.1073\/pnas.1411375111","article-title":"Nitrate foraging by roots is mediated by the transcription factor TCP20 through the systemic signaling pathway","volume":"111","author":"Guan P.Z.","year":"2014","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"e_1_2_10_55_1","doi-asserted-by":"crossref","DOI":"10.1002\/imt2.70015","article-title":"Phenotyping, genome\u2010wide dissection, and prediction of maize root architecture for temperate adaptability","volume":"4","author":"Guo W.","year":"2025","journal-title":"iMeta"},{"key":"e_1_2_10_56_1","doi-asserted-by":"crossref","DOI":"10.3389\/fpls.2025.1656041","article-title":"Regulatory network of ammonium and nitrate uptake and utilization in rice","volume":"16","author":"Guo X.","year":"2025","journal-title":"Front. Plant Sci."},{"key":"e_1_2_10_57_1","doi-asserted-by":"crossref","first-page":"604","DOI":"10.1016\/j.pbi.2010.08.005","article-title":"Nitrate, ammonium, and potassium sensing and signaling","volume":"13","author":"Ho C.H.","year":"2010","journal-title":"Curr. Opin. Plant Biol."},{"key":"e_1_2_10_58_1","doi-asserted-by":"crossref","first-page":"1184","DOI":"10.1016\/j.cell.2009.07.004","article-title":"CHL1 functions as a nitrate sensor in plants","volume":"138","author":"Ho C.H.","year":"2009","journal-title":"Cell"},{"key":"e_1_2_10_59_1","doi-asserted-by":"crossref","first-page":"292","DOI":"10.1111\/nph.18128","article-title":"Arbuscular mycorrhizal symbiosis enhances tomato lateral root formation by modulating CEP2 peptide expression","volume":"235","author":"Hsieh Y.H.","year":"2022","journal-title":"New Phytol."},{"key":"e_1_2_10_60_1","doi-asserted-by":"crossref","first-page":"401","DOI":"10.1038\/s41477-019-0384-1","article-title":"Nitrate\u2013NRT1.1B\u2013SPX4 cascade integrates nitrogen and phosphorus signalling networks in plants","volume":"5","author":"Hu B.","year":"2019","journal-title":"Nat. Plants"},{"key":"e_1_2_10_61_1","doi-asserted-by":"crossref","first-page":"834","DOI":"10.1038\/ng.3337","article-title":"Variation in NRT1.1B contributes to nitrate\u2010use divergence between rice subspecies","volume":"47","author":"Hu B.","year":"2015","journal-title":"Nat. Genet."},{"key":"e_1_2_10_62_1","doi-asserted-by":"crossref","DOI":"10.3389\/fpls.2024.1418119","article-title":"OsCBL1 mediates rice response to local nitrate signaling: Insights into regulatory networks and gene expression","volume":"15","author":"Hu Z.","year":"2024","journal-title":"Front. Plant Sci."},{"key":"e_1_2_10_63_1","doi-asserted-by":"crossref","first-page":"koaf093","DOI":"10.1093\/plcell\/koaf093","article-title":"Model\u2010to\u2010crop conserved NUE Regulons enhance machine learning predictions of nitrogen use efficiency","volume":"37","author":"Huang J.","year":"2025","journal-title":"Plant Cell"},{"key":"e_1_2_10_64_1","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pgen.1004891","article-title":"Local and systemic regulation of plant root system architecture and symbiotic nodulation by a receptor\u2010like kinase","volume":"10","author":"Huault E.","year":"2014","journal-title":"PLoS Genet."},{"key":"e_1_2_10_65_1","doi-asserted-by":"crossref","first-page":"5395","DOI":"10.1093\/jxb\/ert369","article-title":"The peptide\u2010encoding CEP1 gene modulates lateral root and nodule numbers in Medicago truncatula","volume":"64","author":"Imin N.","year":"2013","journal-title":"J. Exp. Bot."},{"key":"e_1_2_10_66_1","doi-asserted-by":"crossref","first-page":"73","DOI":"10.1111\/nph.15019","article-title":"CLE peptide tri\u2010arabinosylation and peptide domain sequence composition are essential for SUNN\u2010dependent autoregulation of nodulation in Medicago truncatula","volume":"218","author":"Imin N.","year":"2018","journal-title":"New Phytol."},{"key":"e_1_2_10_67_1","doi-asserted-by":"crossref","first-page":"5507","DOI":"10.1093\/jxb\/erv307","article-title":"High\u2010resolution quantification of root dynamics in split\u2010nutrient rhizoslides reveals rapid and strong proliferation of maize roots in response to local high nitrogen","volume":"66","author":"In 't Zandt D.","year":"2015","journal-title":"J. Exp. Bot"},{"key":"e_1_2_10_68_1","doi-asserted-by":"crossref","first-page":"5411","DOI":"10.1016\/j.cub.2025.09.060","article-title":"Arabidopsis LOHN1 peptide modulates lateral root spacing under the control of systemic nitrogen\u2010satiety signaling","volume":"35","author":"Ito K.","year":"2025","journal-title":"Curr. Biol."},{"key":"e_1_2_10_69_1","doi-asserted-by":"crossref","first-page":"2012","DOI":"10.1093\/plphys\/kiad012","article-title":"The Medicago SymCEP7 hormone increases nodule number via shoots without compromising lateral root number","volume":"191","author":"Ivanovici A.","year":"2023","journal-title":"Plant Physiol."},{"key":"e_1_2_10_70_1","doi-asserted-by":"crossref","first-page":"1038","DOI":"10.1111\/nph.16710","article-title":"NRT2.1 C\u2010terminus phosphorylation prevents root high affinity nitrate uptake activity in Arabidopsis thaliana","volume":"228","author":"Jacquot A.","year":"2020","journal-title":"New Phytol."},{"key":"e_1_2_10_71_1","doi-asserted-by":"crossref","first-page":"4393","DOI":"10.1093\/jxb\/eraa033","article-title":"Signaling pathways underlying nitrogen\u2010dependent changes in root system architecture: From model to crop species","volume":"71","author":"Jia Z.","year":"2020","journal-title":"J. Exp. Bot."},{"key":"e_1_2_10_72_1","doi-asserted-by":"crossref","first-page":"455","DOI":"10.1016\/j.tplants.2017.03.003","article-title":"Cytokinin transporters: GO and STOP in signaling","volume":"22","author":"Kang J.","year":"2017","journal-title":"Trends Plant Sci."},{"key":"e_1_2_10_73_1","doi-asserted-by":"crossref","first-page":"6872","DOI":"10.1073\/pnas.1030961100","article-title":"The putative glutamate receptor 1.1 (AtGLR1.1) functions as a regulator of carbon and nitrogen metabolism in Arabidopsis thaliana","volume":"100","author":"Kang J.M.","year":"2003","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"e_1_2_10_74_1","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pgen.1002021","article-title":"Genetic regulation by NLA and MicroRNA827 for maintaining nitrate\u2010dependent phosphate homeostasis in Arabidopsis","volume":"7","author":"Kant S.","year":"2011","journal-title":"PLoS Genet."},{"key":"e_1_2_10_75_1","doi-asserted-by":"crossref","first-page":"1057","DOI":"10.1093\/plphys\/kiab392","article-title":"Root plasticity under abiotic stress","volume":"187","author":"Karlova R.","year":"2021","journal-title":"Plant Physiol."},{"key":"e_1_2_10_76_1","doi-asserted-by":"crossref","first-page":"29","DOI":"10.1111\/nph.15025","article-title":"Long distance RNA movement","volume":"218","author":"Kehr J.","year":"2018","journal-title":"New Phytol."},{"key":"e_1_2_10_77_1","doi-asserted-by":"crossref","first-page":"457","DOI":"10.1146\/annurev-arplant-070121-033601","article-title":"Long\u2010distance transported RNAs: From identity to function","volume":"73","author":"Kehr J.","year":"2022","journal-title":"Annu. Rev. Plant Biol."},{"key":"e_1_2_10_78_1","doi-asserted-by":"crossref","first-page":"925","DOI":"10.1105\/tpc.17.00810","article-title":"Repression of nitrogen starvation responses by members of the Arabidopsis GARP\u2010type transcription factor NIGT1\/HRS1 subfamily","volume":"30","author":"Kiba T.","year":"2018","journal-title":"Plant Cell"},{"key":"e_1_2_10_79_1","doi-asserted-by":"crossref","first-page":"7765","DOI":"10.1038\/s41598-019-44185-4","article-title":"Sugar\u2010induced de novo cytokinin biosynthesis contributes to Arabidopsis growth under elevated CO2","volume":"9","author":"Kiba T.","year":"2019","journal-title":"Sci. Rep."},{"key":"e_1_2_10_80_1","doi-asserted-by":"crossref","first-page":"7150","DOI":"10.1073\/pnas.1321519111","article-title":"ABCG14 is essential for the root\u2010to\u2010shoot translocation of cytokinin","volume":"111","author":"Ko D.","year":"2014","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"e_1_2_10_81_1","doi-asserted-by":"crossref","first-page":"6903","DOI":"10.1038\/s41467-024-51091-5","article-title":"Integration of shoot\u2010derived polypeptide signals by root TGA transcription factors is essential for survival under fluctuating nitrogen environments","volume":"15","author":"Kobayashi R.","year":"2024","journal-title":"Nat. Commun."},{"key":"e_1_2_10_82_1","doi-asserted-by":"crossref","first-page":"927","DOI":"10.1016\/j.devcel.2010.05.008","article-title":"Nitrate\u2010regulated auxin transport by NRT1.1 defines a mechanism for nutrient sensing in plants","volume":"18","author":"Krouk G.","year":"2010","journal-title":"Dev. Cell"},{"key":"e_1_2_10_83_1","doi-asserted-by":"crossref","first-page":"422","DOI":"10.1038\/nature01207","article-title":"Shoot control of root development and nodulation is mediated by a receptor\u2010like kinase","volume":"420","author":"Krusell L.","year":"2002","journal-title":"Nature"},{"key":"e_1_2_10_84_1","doi-asserted-by":"crossref","first-page":"861","DOI":"10.1111\/j.1365-313X.2010.04474.x","article-title":"The Clavata2 genes of pea and Lotus japonicus affect autoregulation of nodulation","volume":"65","author":"Krusell L.","year":"2011","journal-title":"Plant J."},{"key":"e_1_2_10_85_1","first-page":"1588","article-title":"The sensing switch: How AtNRT2.4 couples nitrate uptake with plant signaling","volume":"44","author":"Kumar A.","year":"2025","journal-title":"J. Plant Growth Regul."},{"key":"e_1_2_10_86_1","doi-asserted-by":"crossref","first-page":"559","DOI":"10.1104\/pp.18.01588","article-title":"Independent regulation of symbiotic nodulation by the SUNN negative and CRA2 positive systemic pathways","volume":"180","author":"Laffont C.","year":"2019","journal-title":"Plant Physiol."},{"key":"e_1_2_10_87_1","doi-asserted-by":"crossref","first-page":"3167","DOI":"10.1038\/s41467-020-16968-1","article-title":"The NIN transcription factor coordinates CEP and CLE signaling peptides that regulate nodulation antagonistically","volume":"11","author":"Laffont C.","year":"2020","journal-title":"Nat. Commun."},{"key":"e_1_2_10_88_1","doi-asserted-by":"crossref","first-page":"1382","DOI":"10.1073\/pnas.1718670115","article-title":"Nitrate modulates stem cell dynamics in Arabidopsis shoot meristems through cytokinins","volume":"115","author":"Landrein B.","year":"2018","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"e_1_2_10_89_1","doi-asserted-by":"crossref","first-page":"40","DOI":"10.1186\/s13007-016-0140-8","article-title":"RADIX: Rhizoslide platform allowing high throughput digital image analysis of root system expansion","volume":"12","author":"Le Mari\u00e9 C.","year":"2016","journal-title":"Plant Methods"},{"key":"e_1_2_10_90_1","doi-asserted-by":"crossref","DOI":"10.1016\/j.jplph.2023.153922","article-title":"Local and systemic targets of the MtCLE35\u2013SUNN pathway in the roots of Medicago truncatula","volume":"281","author":"Lebedeva M.A.","year":"2023","journal-title":"J. Plant Physiol."},{"key":"e_1_2_10_91_1","doi-asserted-by":"crossref","first-page":"ra43","DOI":"10.1126\/scisignal.aaa4829","article-title":"Nitrate sensing and uptake in Arabidopsis are enhanced by ABI2, a phosphatase inactivated by the stress hormone abscisic acid","volume":"8","author":"L\u00e9ran S.","year":"2015","journal-title":"Sci. Signal."},{"key":"e_1_2_10_92_1","doi-asserted-by":"crossref","DOI":"10.1016\/j.envexpbot.2026.106350","article-title":"CEPD1\u20104 regulates cotton root nitrate uptake under nonuniform nitrate conditions","volume":"244","author":"Li C.","year":"2026","journal-title":"Environ. Exp. Bot."},{"key":"e_1_2_10_93_1","doi-asserted-by":"crossref","first-page":"530","DOI":"10.1093\/plphys\/kiad513","article-title":"C\u2010terminally encoded peptides act as signals to increase cotton root nitrate uptake under nonuniform salinity","volume":"194","author":"Li C.","year":"2023","journal-title":"Plant Physiol."},{"key":"e_1_2_10_94_1","doi-asserted-by":"crossref","first-page":"1905","DOI":"10.1111\/nph.70115","article-title":"Symbiotic nitrogen fixation suppresses root nitrate uptake in Medicago truncatula under nitrate limitation","volume":"246","author":"Li F.","year":"2025","journal-title":"New Phytol."},{"key":"e_1_2_10_95_1","doi-asserted-by":"crossref","first-page":"2016","DOI":"10.1105\/tpc.16.00972","article-title":"NRT1.5\/NPF7.3 functions as a proton\u2010coupled H+\/K+ antiporter for K+ loading into the xylem in Arabidopsis","volume":"29","author":"Li H.","year":"2017","journal-title":"Plant Cell"},{"key":"e_1_2_10_96_1","doi-asserted-by":"crossref","first-page":"341","DOI":"10.1146\/annurev-cellbio-010521-015047","article-title":"Dynamic nutrient signaling networks in plants","volume":"37","author":"Li L.","year":"2021","journal-title":"Annu. Rev. Cell Dev. Biol."},{"key":"e_1_2_10_97_1","doi-asserted-by":"crossref","first-page":"440","DOI":"10.1016\/j.tplants.2021.11.006","article-title":"Bending to auxin: Fast acid growth for tropisms","volume":"27","author":"Li L.X.","year":"2022","journal-title":"Trends Plant Sci."},{"key":"e_1_2_10_98_1","doi-asserted-by":"crossref","first-page":"1906","DOI":"10.1111\/nph.15496","article-title":"TGACG\u2010BINDING FACTORs (TGAs) and TGA\u2010interacting CC\u2010type glutaredoxins modulate hyponastic growth in Arabidopsis thaliana","volume":"221","author":"Li N.","year":"2019","journal-title":"New Phytol."},{"key":"e_1_2_10_99_1","doi-asserted-by":"crossref","first-page":"3175","DOI":"10.1093\/jxb\/erv127","article-title":"A genetic relationship between nitrogen use efficiency and seedling root traits in maize as revealed by QTL analysis","volume":"66","author":"Li P.","year":"2015","journal-title":"J. Exp. Bot"},{"key":"e_1_2_10_100_1","doi-asserted-by":"crossref","first-page":"126","DOI":"10.1145\/3747357.3747377","volume-title":"Proceedings of the 2025 International Symposium on Bioinformatics and Computational Biology","author":"Li X.","year":"2025"},{"key":"e_1_2_10_101_1","doi-asserted-by":"crossref","first-page":"6676","DOI":"10.3390\/ijms23126676","article-title":"Progress in the self\u2010regulation system in legume nodule development\u2010AON (Autoregulation of nodulation)","volume":"23","author":"Li Y.","year":"2022","journal-title":"Int. J. Mol. Sci."},{"key":"e_1_2_10_102_1","doi-asserted-by":"crossref","first-page":"384","DOI":"10.1186\/s12864-026-12736-5","article-title":"Uncovering the early and conserved molecular mechanisms of root nitrogen foraging in model and crops","volume":"27","author":"Li Y.","year":"2026","journal-title":"BMC Genomics"},{"key":"e_1_2_10_103_1","doi-asserted-by":"crossref","DOI":"10.3389\/fpls.2023.1126254","article-title":"Genome\u2010wide association study using specific\u2010locus amplified fragment sequencing identifies new genes influencing nitrogen use efficiency in rice landraces","volume":"14","author":"Liao Z.","year":"2023","journal-title":"Front. Plant Sci"},{"key":"e_1_2_10_104_1","doi-asserted-by":"crossref","first-page":"1613","DOI":"10.1093\/pcp\/pcr091","article-title":"Soybean nodule\u2010enhanced CLE peptides in roots act as signals in GmNARK\u2010mediated nodulation suppression","volume":"52","author":"Lim C.W.","year":"2011","journal-title":"Plant Cell Physiol."},{"key":"e_1_2_10_105_1","doi-asserted-by":"crossref","first-page":"3621","DOI":"10.1105\/tpc.110.076216","article-title":"Ammonium triggers lateral root branching in Arabidopsis in an AMMONIUM TRANSPORTER1;3\u2010dependent manner","volume":"22","author":"Lima J.E.","year":"2010","journal-title":"Plant Cell"},{"key":"e_1_2_10_106_1","doi-asserted-by":"crossref","first-page":"164","DOI":"10.1038\/s41586-024-07607-6","article-title":"Zinc mediates control of nitrogen fixation via transcription factor filamentation","volume":"631","author":"Lin J.","year":"2024","journal-title":"Nature"},{"key":"e_1_2_10_107_1","doi-asserted-by":"crossref","first-page":"942","DOI":"10.1038\/s41477-018-0261-3","article-title":"NIN interacts with NLPs to mediate nitrate inhibition of nodulation in Medicago truncatula","volume":"4","author":"Lin J.S.","year":"2018","journal-title":"Nat. Plants"},{"key":"e_1_2_10_108_1","doi-asserted-by":"crossref","first-page":"2514","DOI":"10.1105\/tpc.108.060244","article-title":"Mutation of the Arabidopsis NRT1.5 nitrate transporter causes defective root\u2010to\u2010shoot nitrate transport","volume":"20","author":"Lin S.H.","year":"2008","journal-title":"Plant Cell"},{"key":"e_1_2_10_109_1","doi-asserted-by":"crossref","first-page":"4061","DOI":"10.1105\/tpc.113.116012","article-title":"Nitrogen limitation adaptation, a target of MicroRNA827, mediates degradation of plasma membrane\u2013localized phosphate transporters to maintain phosphate homeostasis in Arabidopsis","volume":"25","author":"Lin W.Y.","year":"2013","journal-title":"Plant Cell"},{"key":"e_1_2_10_110_1","doi-asserted-by":"crossref","first-page":"13693","DOI":"10.1073\/pnas.0504219102","article-title":"The putative high\u2010affinity nitrate transporter NRT2.1 represses lateral root initiation in response to nutritional cues","volume":"102","author":"Little D.Y.","year":"2005","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"e_1_2_10_111_1","doi-asserted-by":"crossref","first-page":"1259","DOI":"10.1093\/plcell\/koad014","article-title":"The anion channel SLAH3 interacts with potassium channels to regulate nitrogen\u2013potassium homeostasis and the membrane potential in Arabidopsis","volume":"35","author":"Liu B.B.","year":"2023","journal-title":"Plant Cell"},{"key":"e_1_2_10_112_1","doi-asserted-by":"crossref","first-page":"272","DOI":"10.1016\/j.plantsci.2008.04.009","article-title":"Microarray analysis reveals early responsive genes possibly involved in localized nitrate stimulation of lateral root development in maize (Zea mays L.)","volume":"175","author":"Liu J.","year":"2008","journal-title":"Plant Sci."},{"key":"e_1_2_10_113_1","doi-asserted-by":"crossref","first-page":"1419","DOI":"10.1126\/science.add1104","article-title":"NIN\u2010like protein 7 transcription factor is a plant nitrate sensor","volume":"377","author":"Liu K.H.","year":"2022","journal-title":"Science"},{"key":"e_1_2_10_114_1","doi-asserted-by":"crossref","first-page":"311","DOI":"10.1038\/nature22077","article-title":"Discovery of nitrate\u2013CPK\u2013NLP signalling in central nutrient\u2010growth networks","volume":"545","author":"Liu K.H.","year":"2017","journal-title":"Nature"},{"key":"e_1_2_10_115_1","first-page":"895","article-title":"Three\u2010dimensional dynamic modeling of soil aggregate structure and root interaction based on artificial intelligence and its application in nitrogen uptake","volume":"5","author":"Liu S.","year":"2025","journal-title":"Adv. Resour. Res."},{"key":"e_1_2_10_116_1","doi-asserted-by":"crossref","first-page":"312","DOI":"10.1016\/j.pbi.2009.04.004","article-title":"The long\u2010distance signaling of mineral macronutrients","volume":"12","author":"Liu T.Y.","year":"2009","journal-title":"Curr. Opin. Plant Biol."},{"key":"e_1_2_10_117_1","doi-asserted-by":"crossref","first-page":"647","DOI":"10.1016\/j.tplants.2014.06.004","article-title":"MicroRNA\u2010mediated surveillance of phosphate transporters on the move","volume":"19","author":"Liu T.Y.","year":"2014","journal-title":"Trends Plant Sci."},{"key":"e_1_2_10_118_1","doi-asserted-by":"crossref","first-page":"655","DOI":"10.52586\/4974","article-title":"Advances in the regulation of plant development and stress response by miR167","volume":"26","author":"Liu X.","year":"2021","journal-title":"Front. Biosci. (Landmark Ed)"},{"key":"e_1_2_10_119_1","doi-asserted-by":"crossref","DOI":"10.1016\/j.xplc.2021.100183","article-title":"NLP1 reciprocally regulates nitrate inhibition of nodulation through SUNN\u2013CRA2 signaling in Medicago truncatula","volume":"2","author":"Luo Z.","year":"2021","journal-title":"Plant Commun."},{"key":"e_1_2_10_120_1","doi-asserted-by":"crossref","first-page":"776","DOI":"10.1093\/plcell\/koac340","article-title":"The small peptide CEP1 and the NIN\u2010like protein NLP1 regulate NRT2.1 to mediate root nodule formation across nitrate concentrations","volume":"35","author":"Luo Z.","year":"2023","journal-title":"Plant Cell"},{"key":"e_1_2_10_121_1","doi-asserted-by":"crossref","first-page":"548","DOI":"10.1111\/nph.15738","article-title":"Root phenotypes for improved nutrient capture: An underexploited opportunity for global agriculture","volume":"223","author":"Lynch J.P.","year":"2019","journal-title":"New Phytol."},{"key":"e_1_2_10_122_1","doi-asserted-by":"crossref","first-page":"415","DOI":"10.1111\/tpj.15560","article-title":"Harnessing root architecture to address global challenges","volume":"109","author":"Lynch J.P.","year":"2022","journal-title":"Plant J."},{"key":"e_1_2_10_123_1","first-page":"31","article-title":"Root phenotypes for improved nitrogen capture","volume":"502","author":"Lynch J.P.","year":"2024","journal-title":"Plant Soil"},{"key":"e_1_2_10_124_1","doi-asserted-by":"crossref","first-page":"178","DOI":"10.1093\/jxb\/erad035","article-title":"Getting to the roots of N, P, and K uptake","volume":"74","author":"Lyzenga W.J.","year":"2023","journal-title":"J. Exp. Bot"},{"key":"e_1_2_10_125_1","doi-asserted-by":"crossref","first-page":"5231","DOI":"10.1016\/j.cell.2025.07.027","article-title":"NRT1.1B acts as an abscisic acid receptor in integrating compound environmental cues for plants","volume":"188","author":"Ma X.","year":"2025","journal-title":"Cell"},{"key":"e_1_2_10_126_1","doi-asserted-by":"crossref","first-page":"1376","DOI":"10.1038\/s41467-018-03832-6","article-title":"A NIGT1\u2010centred transcriptional cascade regulates nitrate signalling and incorporates phosphorus starvation signals in Arabidopsis","volume":"9","author":"Maeda Y.","year":"2018","journal-title":"Nat. Commun."},{"key":"e_1_2_10_127_1","doi-asserted-by":"crossref","first-page":"1713","DOI":"10.1038\/ncomms2650","article-title":"Nuclear retention of the transcription factor NLP7 orchestrates the early response to nitrate in plants","volume":"4","author":"Marchive C.","year":"2013","journal-title":"Nat. Commun."},{"key":"e_1_2_10_128_1","doi-asserted-by":"crossref","first-page":"1171","DOI":"10.1105\/tpc.18.00656","article-title":"Identification of molecular integrators shows that nitrogen actively controls the phosphate starvation response in plants","volume":"31","author":"Medici A.","year":"2019","journal-title":"Plant Cell"},{"key":"e_1_2_10_129_1","doi-asserted-by":"crossref","first-page":"1136","DOI":"10.1038\/s41477-020-00756-2","article-title":"Auxin\u2010mediated root branching is determined by the form of available nitrogen","volume":"6","author":"Meier M.","year":"2020","journal-title":"Nat. Plants"},{"key":"e_1_2_10_130_1","doi-asserted-by":"crossref","first-page":"2525","DOI":"10.1111\/nph.17010","article-title":"Characterisation of Medicago truncatula CLE34 and CLE35 in nitrate and rhizobia regulation of nodulation","volume":"229","author":"Mens C.","year":"2020","journal-title":"New Phytol."},{"key":"e_1_2_10_131_1","doi-asserted-by":"crossref","first-page":"150","DOI":"10.3389\/fpls.2018.01150","article-title":"Local and systemic effect of cytokinins on soybean nodulation and regulation of their isopentenyl transferase (IPT) biosynthesis genes following rhizobia inoculation","volume":"9","author":"Mens C.","year":"2018","journal-title":"Front. Plant Sci."},{"key":"e_1_2_10_132_1","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1007\/s11104-004-0965-1","article-title":"Root nitrogen acquisition and assimilation","volume":"274","author":"Miller A.J.","year":"2005","journal-title":"Plant Soil"},{"key":"e_1_2_10_133_1","doi-asserted-by":"crossref","first-page":"1844","DOI":"10.1093\/plcell\/koac046","article-title":"Nitrate transport via NRT2.1 mediates NIN\u2010LIKE PROTEIN\u2010dependent suppression of root nodulation in Lotus japonicus","volume":"34","author":"Misawa F.","year":"2022","journal-title":"Plant Cell"},{"key":"e_1_2_10_134_1","doi-asserted-by":"crossref","first-page":"4317","DOI":"10.1242\/dev.058891","article-title":"The receptor\u2010like kinase KLAVIER mediates systemic regulation of nodulation and non\u2010symbiotic shoot development in Lotus japonicus","volume":"137","author":"Miyazawa H.","year":"2010","journal-title":"Development"},{"key":"e_1_2_10_135_1","doi-asserted-by":"crossref","first-page":"3","DOI":"10.1007\/s10265-019-01153-3","article-title":"Molecular mechanisms mediating root hydrotropism: What we have observed since the rediscovery of hydrotropism","volume":"133","author":"Miyazawa Y.","year":"2019","journal-title":"J. Plant Res."},{"key":"e_1_2_10_136_1","doi-asserted-by":"crossref","first-page":"5289","DOI":"10.1093\/jxb\/erv008","article-title":"Novel MtCEP1 peptides produced in vivo differentially regulate root development in Medicago truncatula","volume":"66","author":"Mohd\u2010Radzman N.A.","year":"2015","journal-title":"J. Exp. Bot."},{"key":"e_1_2_10_137_1","doi-asserted-by":"crossref","first-page":"2536","DOI":"10.1104\/pp.16.00113","article-title":"Different pathways act downstream of the CEP peptide receptor CRA2 to regulate lateral root and nodule development","volume":"171","author":"Mohd\u2010Radzman N.A.","year":"2016","journal-title":"Plant Physiol."},{"key":"e_1_2_10_138_1","doi-asserted-by":"crossref","first-page":"1216","DOI":"10.1093\/plphys\/kiaa094","article-title":"Nitrate\u2010induced CLE35 signaling peptides inhibit nodulation through the SUNN receptor and miR2111 repression","volume":"185","author":"Moreau C.","year":"2021","journal-title":"Plant Physiol."},{"key":"e_1_2_10_139_1","doi-asserted-by":"crossref","first-page":"367","DOI":"10.1111\/j.1365-313X.2011.04881.x","article-title":"Nodule numbers are governed by interaction between CLE peptides and cytokinin signaling","volume":"70","author":"Mortier V.","year":"2012","journal-title":"Plant J."},{"key":"e_1_2_10_140_1","doi-asserted-by":"crossref","first-page":"222","DOI":"10.1104\/pp.110.153718","article-title":"CLE peptides control Medicago truncatula nodulation locally and systemically","volume":"153","author":"Mortier V.","year":"2010","journal-title":"Plant Physiol."},{"key":"e_1_2_10_141_1","doi-asserted-by":"crossref","first-page":"465","DOI":"10.1146\/annurev-arplant-050718-100423","article-title":"Molecular and environmental regulation of root development","volume":"70","author":"Motte H.","year":"2019","journal-title":"Annu. Rev. Plant Biol."},{"key":"e_1_2_10_142_1","doi-asserted-by":"crossref","DOI":"10.1073\/pnas.2417735122","article-title":"Ethylene\u2010independent modulation of root development by ACC via downregulation of WOX5 and group I CLE peptide expression","volume":"122","author":"Mou W.","year":"2025","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"e_1_2_10_143_1","doi-asserted-by":"crossref","first-page":"162","DOI":"10.1111\/pce.12143","article-title":"Auxin\u2010mediated nitrate signalling by NRT1.1 participates in the adaptive response of Arabidopsis root architecture to the spatial heterogeneity of nitrate availability","volume":"37","author":"Mounier E.","year":"2014","journal-title":"Plant Cell Environ."},{"key":"e_1_2_10_144_1","first-page":"7","volume-title":"ALIFE 2024: Proceedings of the 2024 Artificial Life Conference","author":"Mu\u00dfmann M.","year":"2024"},{"key":"e_1_2_10_145_1","doi-asserted-by":"crossref","first-page":"1176","DOI":"10.1111\/tpj.16103","article-title":"CLE3 and its homologs share overlapping functions in the modulation of lateral root formation through CLV1 and BAM1 in Arabidopsis thaliana","volume":"113","author":"Nakagami S.","year":"2023","journal-title":"Plant J."},{"key":"e_1_2_10_146_1","doi-asserted-by":"crossref","first-page":"201","DOI":"10.3390\/plants9020201","article-title":"Exodermis and endodermis respond to nutrient deficiency in nutrient\u2010specific and localized manner","volume":"9","author":"Namyslov J.","year":"2020","journal-title":"Plants"},{"key":"e_1_2_10_147_1","doi-asserted-by":"crossref","first-page":"404","DOI":"10.1093\/pcp\/pcx199","article-title":"SODIUM POTASSIUM ROOT DEFECTIVE1 regulates FLOWERING LOCUS T expression via the microRNA156\u2013SQUAMOSA PROMOTER BINDING PROTEIN\u2010LIKE3 module in response to potassium conditions","volume":"59","author":"Negishi K.","year":"2018","journal-title":"Plant Cell Physiol."},{"key":"e_1_2_10_148_1","doi-asserted-by":"crossref","first-page":"909","DOI":"10.1007\/s10265-016-0842-z","article-title":"Expression of the CLE\u2010RS3 gene suppresses root nodulation in Lotus japonicus","volume":"129","author":"Nishida H.","year":"2016","journal-title":"J. Plant Res."},{"key":"e_1_2_10_149_1","doi-asserted-by":"crossref","first-page":"2340","DOI":"10.1093\/plcell\/koab103","article-title":"Different DNA\u2010binding specificities of NLP and NIN transcription factors underlie nitrate\u2010induced control of root nodulation","volume":"33","author":"Nishida H.","year":"2021","journal-title":"Plant Cell"},{"key":"e_1_2_10_150_1","doi-asserted-by":"crossref","first-page":"499","DOI":"10.1038\/s41467-018-02831-x","article-title":"A NIN\u2010LIKE PROTEIN mediates nitrate\u2010induced control of root nodule symbiosis in Lotus japonicus","volume":"9","author":"Nishida H.","year":"2018","journal-title":"Nat. Commun."},{"key":"e_1_2_10_151_1","doi-asserted-by":"crossref","first-page":"426","DOI":"10.1038\/nature01231","article-title":"HAR1 mediates systemic regulation of symbiotic organ development","volume":"420","author":"Nishimura R.","year":"2002","journal-title":"Nature"},{"key":"e_1_2_10_152_1","doi-asserted-by":"crossref","first-page":"837","DOI":"10.1016\/j.molp.2016.05.004","article-title":"Nitrate transport, sensing, and responses in plants","volume":"9","author":"O'Brien J.A.","year":"2016","journal-title":"Mol. Plant"},{"key":"e_1_2_10_153_1","doi-asserted-by":"crossref","first-page":"331","DOI":"10.1007\/s10265-023-01513-0","article-title":"Role of GARP family transcription factors in the regulatory network for nitrogen and phosphorus acquisition","volume":"137","author":"Ohama N.","year":"2024","journal-title":"J. Plant Res."},{"key":"e_1_2_10_154_1","doi-asserted-by":"crossref","first-page":"310","DOI":"10.1038\/s41477-021-00870-9","article-title":"A type 2C protein phosphatase activates high\u2010affinity nitrate uptake by dephosphorylating NRT2.1","volume":"7","author":"Ohkubo Y.","year":"2021","journal-title":"Nat. Plants"},{"key":"e_1_2_10_155_1","doi-asserted-by":"crossref","DOI":"10.1038\/nplants.2017.29","article-title":"Shoot\u2010to\u2010root mobile polypeptides involved in systemic regulation of nitrogen acquisition","volume":"3","author":"Ohkubo Y.","year":"2017","journal-title":"Nat. Plants"},{"key":"e_1_2_10_156_1","doi-asserted-by":"crossref","first-page":"152","DOI":"10.1111\/j.1365-313X.2008.03464.x","article-title":"Identification of a biologically active, small, secreted peptide in Arabidopsis by in silico gene screening, followed by LC\u2010MS\u2010based structure analysis","volume":"55","author":"Ohyama K.","year":"2008","journal-title":"Plant J."},{"key":"e_1_2_10_157_1","doi-asserted-by":"crossref","first-page":"67","DOI":"10.1093\/pcp\/pcn194","article-title":"Nod factor\/nitrate\u2010induced CLE genes that drive HAR1\u2010mediated systemic regulation of nodulation","volume":"50","author":"Okamoto S.","year":"2009","journal-title":"Plant Cell Physiol."},{"key":"e_1_2_10_158_1","doi-asserted-by":"crossref","first-page":"2191","DOI":"10.1038\/ncomms3191","article-title":"Root\u2010derived CLE glycopeptides control nodulation by direct binding to HAR1 receptor kinase","volume":"4","author":"Okamoto S.","year":"2013","journal-title":"Nat. Commun."},{"key":"e_1_2_10_159_1","doi-asserted-by":"crossref","DOI":"10.3389\/fpls.2021.682486","article-title":"Systemic optimization of legume nodulation: A shoot\u2010derived regulator, miR2111","volume":"12","author":"Okuma N.","year":"2021","journal-title":"Front. Plant Sci."},{"key":"e_1_2_10_160_1","doi-asserted-by":"crossref","first-page":"1191","DOI":"10.1038\/s41467-020-19037-9","article-title":"MIR2111\u20105 locus and shoot\u2010accumulated mature miR2111 systemically enhance nodulation depending on HAR1 in Lotus japonicus","volume":"11","author":"Okuma N.","year":"2020","journal-title":"Nat. Commun."},{"key":"e_1_2_10_161_1","doi-asserted-by":"crossref","first-page":"814","DOI":"10.1111\/nph.15812","article-title":"Nitrate acts at the Arabidopsis thaliana shoot apical meristem to regulate flowering time","volume":"223","author":"Olas J.J.","year":"2019","journal-title":"New Phytol."},{"key":"e_1_2_10_162_1","doi-asserted-by":"crossref","DOI":"10.1126\/science.aba0196","article-title":"A plant's diet, surviving in a variable nutrient environment","volume":"368","author":"Oldroyd G.E.D.","year":"2020","journal-title":"Science"},{"key":"e_1_2_10_163_1","doi-asserted-by":"crossref","first-page":"886","DOI":"10.1104\/pp.005280","article-title":"Analysis of the NRT2 nitrate transporter family in Arabidopsis. Structure and gene expression","volume":"129","author":"Orsel M.","year":"2002","journal-title":"Plant Physiol."},{"key":"e_1_2_10_164_1","doi-asserted-by":"crossref","DOI":"10.1038\/nplants.2017.112","article-title":"Systemic transport of trans\u2010zeatin and its precursor have differing roles in Arabidopsis shoots","volume":"3","author":"Osugi A.","year":"2017","journal-title":"Nat. Plants"},{"key":"e_1_2_10_165_1","first-page":"681","article-title":"Shoot\u2010to\u2010root mobile CEPD\u2010like 2 integrates shoot nitrogen status to systemically regulate nitrate uptake in Arabidopsis","volume":"11","author":"Ota R.","year":"2020","journal-title":"Nat. Commun."},{"key":"e_1_2_10_166_1","doi-asserted-by":"crossref","first-page":"1541","DOI":"10.1104\/pp.109.139139","article-title":"Identification of nutrient\u2010responsive Arabidopsis and rapeseed microRNAs by comprehensive real\u2010time polymerase chain reaction profiling and small RNA sequencing","volume":"150","author":"Pant B.D.","year":"2009","journal-title":"Plant Physiol."},{"key":"e_1_2_10_167_1","doi-asserted-by":"crossref","first-page":"454","DOI":"10.1105\/tpc.113.120311","article-title":"NITROGEN LIMITATION ADAPTATION recruits PHOSPHATE2 to target the phosphate transporter PT2 for degradation during the regulation of phosphate homeostasis","volume":"26","author":"Park B.S.","year":"2014","journal-title":"Plant Cell"},{"key":"e_1_2_10_168_1","doi-asserted-by":"crossref","first-page":"5366","DOI":"10.1016\/j.cub.2024.09.058","article-title":"The CEP peptide\u2013CRA2 receptor module promotes arbuscular mycorrhizal symbiosis","volume":"34","author":"Pedinotti L.","year":"2024","journal-title":"Curr. Biol."},{"key":"e_1_2_10_169_1","doi-asserted-by":"crossref","first-page":"1243","DOI":"10.1105\/tpc.18.00011","article-title":"Responses to systemic nitrogen signaling in Arabidopsis roots involve trans\u2010Zeatin in shoots","volume":"30","author":"Poitout A.","year":"2018","journal-title":"Plant Cell"},{"key":"e_1_2_10_170_1","doi-asserted-by":"crossref","first-page":"107","DOI":"10.1007\/s42994-023-00123-7","article-title":"Staying hungry: A roadmap to harnessing central regulators of symbiotic nitrogen fixation under fluctuating nitrogen availability","volume":"5","author":"Qiao L.","year":"2024","journal-title":"aBIOTECH"},{"key":"e_1_2_10_171_1","doi-asserted-by":"crossref","first-page":"610","DOI":"10.1093\/pcp\/pcab014","article-title":"Strigolactones and auxin cooperate to regulate maize root development and response to nitrate","volume":"62","author":"Ravazzolo L.","year":"2021","journal-title":"Plant Cell Physiol."},{"key":"e_1_2_10_172_1","doi-asserted-by":"crossref","first-page":"606","DOI":"10.1094\/MPMI-09-10-0207","article-title":"Inoculation\u2010 and nitrate\u2010induced CLE peptides of soybean control NARK\u2010dependent nodule formation","volume":"24","author":"Reid D.E.","year":"2011","journal-title":"Mol. Plant\u2010Microbe Interact"},{"key":"e_1_2_10_173_1","doi-asserted-by":"crossref","first-page":"1575","DOI":"10.1093\/jxb\/ert008","article-title":"Structure\u2010function analysis of the GmRIC1 signal peptide and CLE domain required for nodulation control in soybean","volume":"64","author":"Reid D.E.","year":"2013","journal-title":"J. Exp. Bot."},{"key":"e_1_2_10_174_1","doi-asserted-by":"crossref","first-page":"19206","DOI":"10.1073\/pnas.0605275103","article-title":"The Arabidopsis NRT1.1 transporter participates in the signaling pathway triggering root colonization of nitrate\u2010rich patches","volume":"103","author":"Remans T.","year":"2006","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"e_1_2_10_175_1","doi-asserted-by":"crossref","first-page":"909","DOI":"10.1104\/pp.105.075721","article-title":"A central role for the nitrate transporter NRT2.1 in the integrated morphological and physiological responses of the root system to nitrogen limitation in Arabidopsis","volume":"140","author":"Remans T.","year":"2006","journal-title":"Plant Physiol."},{"key":"e_1_2_10_176_1","doi-asserted-by":"crossref","first-page":"4889","DOI":"10.1093\/jxb\/erw231","article-title":"CEP5 and XIP1\/CEPR1 regulate lateral root initiation in Arabidopsis","volume":"67","author":"Roberts I.","year":"2016","journal-title":"J. Exp. Bot."},{"key":"e_1_2_10_177_1","doi-asserted-by":"crossref","first-page":"553","DOI":"10.1093\/pcp\/pcaa156","article-title":"Regulation of root nutrient transporters by CIPK23: \u2018One kinase to rule them all\u2019","volume":"62","author":"R\u00f3denas R.","year":"2020","journal-title":"Plant Cell Physiol."},{"key":"e_1_2_10_178_1","doi-asserted-by":"crossref","DOI":"10.1038\/nplants.2017.40","article-title":"Systemic nutrient signalling: On the road for nitrate","volume":"3","author":"Ruffel S.","year":"2017","journal-title":"Nat. Plants"},{"key":"e_1_2_10_179_1","doi-asserted-by":"crossref","first-page":"18524","DOI":"10.1073\/pnas.1108684108","article-title":"Nitrogen economics of root foraging: Transitive closure of the nitrate\u2013cytokinin relay and distinct systemic signaling for N supply vs. demand","volume":"108","author":"Ruffel S.","year":"2011","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"e_1_2_10_180_1","doi-asserted-by":"crossref","first-page":"25","DOI":"10.1146\/annurev-arplant-083123-053039","article-title":"Nitrate sensing and signaling in plants: Comparative insights and nutritional interactions","volume":"76","author":"Ruffel S.","year":"2025","journal-title":"Annu. Rev. Plant Biol."},{"key":"e_1_2_10_181_1","doi-asserted-by":"crossref","first-page":"421","DOI":"10.1111\/tpj.15011","article-title":"Cytokinin biosynthesis and transport for systemic nitrogen signaling","volume":"105","author":"Sakakibara H.","year":"2021","journal-title":"Plant J."},{"key":"e_1_2_10_182_1","doi-asserted-by":"crossref","first-page":"337","DOI":"10.1046\/j.1365-313X.1998.00134.x","article-title":"A response\u2010regulator homologue possibly involved in nitrogen signal transduction mediated by cytokinin in maize","volume":"14","author":"Sakakibara H.","year":"1998","journal-title":"Plant J."},{"key":"e_1_2_10_183_1","doi-asserted-by":"crossref","first-page":"1604","DOI":"10.1093\/plphys\/kiab587","article-title":"Root electrotropism in Arabidopsis does not depend on auxin distribution but requires cytokinin biosynthesis","volume":"188","author":"Salvalaio M.","year":"2022","journal-title":"Plant Physiol."},{"key":"e_1_2_10_184_1","doi-asserted-by":"crossref","first-page":"4983","DOI":"10.1038\/ncomms5983","article-title":"Shoot\u2010derived cytokinins systemically regulate root nodulation","volume":"5","author":"Sasaki T.","year":"2014","journal-title":"Nat. Commun."},{"key":"e_1_2_10_185_1","doi-asserted-by":"crossref","first-page":"809","DOI":"10.1007\/s11103-005-8102-y","article-title":"The Medicago truncatula SUNN gene encodes a CLV1\u2010like leucine\u2010rich repeat receptor kinase that regulates nodule number and root length","volume":"58","author":"Schnabel E.","year":"2005","journal-title":"Plant Mol. Biol."},{"key":"e_1_2_10_186_1","doi-asserted-by":"crossref","first-page":"837","DOI":"10.1111\/pce.14135","article-title":"Root angle in maize influences nitrogen capture and is regulated by calcineurin B\u2010like protein (CBL)\u2010interacting serine\/threonine\u2010protein kinase 15 (ZmCIPK15)","volume":"45","author":"Schneider H.M.","year":"2022","journal-title":"Plant Cell Environ."},{"key":"e_1_2_10_187_1","doi-asserted-by":"crossref","first-page":"59","DOI":"10.1146\/annurev.pp.01.060150.000423","article-title":"Plant tropisms","volume":"1","author":"Schrank A.R.","year":"1950","journal-title":"Annu. Rev. Plant Biol."},{"key":"e_1_2_10_188_1","doi-asserted-by":"crossref","first-page":"109","DOI":"10.1126\/science.1077937","article-title":"Long\u2010distance signaling in nodulation directed by a CLAVATA1\u2010like receptor kinase","volume":"299","author":"Searle I.R.","year":"2003","journal-title":"Science"},{"key":"e_1_2_10_189_1","doi-asserted-by":"crossref","first-page":"8083","DOI":"10.1038\/s41467-023-43738-6","article-title":"A microRNA mediates shoot control of root branching","volume":"14","author":"Sexauer M.","year":"2023","journal-title":"Nat. Commun."},{"key":"e_1_2_10_190_1","doi-asserted-by":"crossref","first-page":"2932","DOI":"10.3390\/plants13202932","article-title":"Contrasting alleles of OsNRT1.1b fostering potential in improving nitrogen use efficiency in rice","volume":"13","author":"Siangliw J.L.","year":"2024","journal-title":"Plants"},{"key":"e_1_2_10_191_1","doi-asserted-by":"crossref","first-page":"307","DOI":"10.1007\/BF00010976","article-title":"Role of cytokinin in enhanced productivity of maize supplied with NH4\n                  + and NO3\n                  \u2212","volume":"142","author":"Smiciklas K.D.","year":"1992","journal-title":"Plant Soil"},{"key":"e_1_2_10_192_1","doi-asserted-by":"crossref","first-page":"1383","DOI":"10.1093\/aob\/mct212","article-title":"Auxin distribution is differentially affected by nitrate in roots of two rice cultivars differing in responsiveness to nitrogen","volume":"112","author":"Song W.","year":"2013","journal-title":"Ann. Bot."},{"key":"e_1_2_10_193_1","doi-asserted-by":"crossref","first-page":"14607","DOI":"10.1073\/pnas.1412716111","article-title":"NODULE INCEPTION creates a long\u2010distance negative feedback loop involved in homeostatic regulation of nodule organ production","volume":"111","author":"Soyano T.","year":"2014","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"e_1_2_10_194_1","doi-asserted-by":"crossref","first-page":"R964","DOI":"10.1016\/j.cub.2017.07.015","article-title":"Molecular mechanisms of root gravitropism","volume":"27","author":"Su S.H.","year":"2017","journal-title":"Curr. Biol."},{"key":"e_1_2_10_195_1","doi-asserted-by":"crossref","first-page":"616","DOI":"10.1093\/mp\/ssr007","article-title":"Auxin\u2013cytokinin interaction regulates meristem development","volume":"4","author":"Su Y.H.","year":"2011","journal-title":"Mol. Plant"},{"key":"e_1_2_10_196_1","first-page":"228","article-title":"Overexpression of peptide\u2010encoding OsCEP6.1 results in pleiotropic effects on growth in rice (O. sativa)","volume":"7","author":"Sui Z.","year":"2016","journal-title":"Front. Plant Sci."},{"key":"e_1_2_10_197_1","doi-asserted-by":"crossref","first-page":"73","DOI":"10.1038\/nature13074","article-title":"Crystal structure of the plant dual\u2010affinity nitrate transporter NRT1.1","volume":"507","author":"Sun J.","year":"2014","journal-title":"Nature"},{"key":"e_1_2_10_198_1","first-page":"239","article-title":"Nitrogen\u2010driven orchestration of lateral root development: Molecular mechanisms and systemic integration","volume":"14","author":"Sun X.C.","year":"2025","journal-title":"Biology"},{"key":"e_1_2_10_199_1","doi-asserted-by":"crossref","first-page":"343","DOI":"10.1126\/science.1257800","article-title":"Perception of root\u2010derived peptides by shoot LRR\u2010RKs mediates systemic N\u2010demand signaling","volume":"346","author":"Tabata R.","year":"2014","journal-title":"Science"},{"key":"e_1_2_10_200_1","doi-asserted-by":"crossref","first-page":"433","DOI":"10.1093\/pcp\/pct022","article-title":"TOO MUCH LOVE, a novel Kelch repeat\u2010containing F\u2010box protein, functions in the long\u2010distance regulation of the legume\u2013Rhizobium symbiosis","volume":"54","author":"Takahara M.","year":"2013","journal-title":"Plant Cell Physiol."},{"key":"e_1_2_10_201_1","doi-asserted-by":"crossref","first-page":"235","DOI":"10.1038\/s41586-018-0009-2","article-title":"A small peptide modulates stomatal control via abscisic acid in long\u2010distance signalling","volume":"556","author":"Takahashi F.","year":"2018","journal-title":"Nature"},{"key":"e_1_2_10_202_1","doi-asserted-by":"crossref","first-page":"403","DOI":"10.3389\/fpls.2019.00403","article-title":"Loss\u2010of\u2010function of a tomato receptor\u2010like kinase impairs male fertility and induces parthenocarpic fruit set","volume":"10","author":"Takei H.","year":"2019","journal-title":"Front. Plant Sci."},{"key":"e_1_2_10_203_1","doi-asserted-by":"crossref","first-page":"41866","DOI":"10.1074\/jbc.M406337200","article-title":"Arabidopsis CYP735A1 and CYP735A2 encode cytokinin hydroxylases that catalyze the biosynthesis of trans\u2010Zeatin","volume":"279","author":"Takei K.","year":"2004","journal-title":"J. Biol. Chem."},{"key":"e_1_2_10_204_1","doi-asserted-by":"crossref","first-page":"7516","DOI":"10.1038\/s41467-023-43370-4","article-title":"Diurnal switches in diazotrophic lifestyle increase nitrogen contribution to cereals","volume":"14","author":"Tang Y.","year":"2023","journal-title":"Nat. Commun."},{"key":"e_1_2_10_205_1","doi-asserted-by":"crossref","first-page":"5861","DOI":"10.1093\/jxb\/eraf316","article-title":"CEPR1 function across plant lineages: Peptide hormone recognition by cereal crop orthologs and developmental roles in barley","volume":"76","author":"Taylor K.","year":"2025","journal-title":"J. Exp. Bot."},{"key":"e_1_2_10_206_1","doi-asserted-by":"crossref","DOI":"10.1093\/plcell\/koaf038","article-title":"Redox\u2010inactive CC\u2010type glutaredoxins interfere with TGA transcription factor\u2013dependent repression of target promoters in roots","volume":"37","author":"Thurow C.","year":"2025","journal-title":"Plant Cell"},{"key":"e_1_2_10_207_1","doi-asserted-by":"crossref","first-page":"185","DOI":"10.1007\/s11104-005-6837-5","article-title":"Possible involvement of cytokinin in nitrate\u2010mediated root growth in maize","volume":"277","author":"Tian Q.","year":"2005","journal-title":"Plant Soil"},{"key":"e_1_2_10_208_1","doi-asserted-by":"crossref","DOI":"10.1073\/pnas.2300446120","article-title":"The transcription factors, STOP1 and TCP20, are required for root system architecture alterations in response to nitrate deficiency","volume":"120","author":"Tokizawa M.","year":"2023","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"e_1_2_10_209_1","doi-asserted-by":"crossref","first-page":"207","DOI":"10.1146\/annurev-arplant-042110-103837","article-title":"Integration of nitrogen and potassium signaling","volume":"62","author":"Tsay Y.F.","year":"2011","journal-title":"Annu. Rev. Plant Biol."},{"key":"e_1_2_10_210_1","doi-asserted-by":"crossref","first-page":"705","DOI":"10.1016\/0092-8674(93)90399-B","article-title":"The herbicide sensitivity gene Chl1 of Arabidopsis encodes a nitrate\u2010inducible nitrate transporter","volume":"72","author":"Tsay Y.F.","year":"1993","journal-title":"Cell"},{"key":"e_1_2_10_211_1","doi-asserted-by":"crossref","first-page":"233","DOI":"10.1126\/science.aat6907","article-title":"Systemic control of legume susceptibility to rhizobial infection by a mobile microRNA","volume":"362","author":"Tsikou D.","year":"2018","journal-title":"Science"},{"key":"e_1_2_10_212_1","doi-asserted-by":"crossref","first-page":"781","DOI":"10.1146\/annurev-arplant-050312-120235","article-title":"Transport and metabolism in legume\u2010rhizobia symbioses","volume":"64","author":"Udvardi M.","year":"2013","journal-title":"Annu. Rev. Plant Biol."},{"key":"e_1_2_10_213_1","doi-asserted-by":"crossref","first-page":"428","DOI":"10.1111\/j.1365-313X.2006.02973.x","article-title":"HY5 is a point of convergence between cryptochrome and cytokinin signalling pathways in Arabidopsis thaliana","volume":"49","author":"Vandenbussche F.","year":"2007","journal-title":"Plant J."},{"key":"e_1_2_10_214_1","doi-asserted-by":"crossref","first-page":"580","DOI":"10.1111\/j.1365-313X.2008.03531.x","article-title":"The Medicago truncatula ortholog of Arabidopsis EIN2, sickle, is a negative regulator of symbiotic and pathogenic microbial associations","volume":"55","author":"Varma Penmetsa R.","year":"2008","journal-title":"Plant J."},{"key":"e_1_2_10_215_1","doi-asserted-by":"crossref","first-page":"4477","DOI":"10.1073\/pnas.0909571107","article-title":"Nitrate\u2010responsive miR393\/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana","volume":"107","author":"Vidal E.A.","year":"2010","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"e_1_2_10_216_1","doi-asserted-by":"crossref","first-page":"12840","DOI":"10.1073\/pnas.1310937110","article-title":"Systems approaches map regulatory networks downstream of the auxin receptor AFB3 in the nitrate response of Arabidopsis thaliana roots","volume":"110","author":"Vidal E.A.","year":"2013","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"e_1_2_10_217_1","doi-asserted-by":"crossref","first-page":"1304","DOI":"10.1105\/tpc.113.110668","article-title":"Interacting Glutamate Receptor\u2010Like Proteins in phloem regulate lateral root initiation in Arabidopsis","volume":"25","author":"Vincill E.D.","year":"2013","journal-title":"Plant Cell"},{"key":"e_1_2_10_218_1","doi-asserted-by":"crossref","first-page":"1045","DOI":"10.1093\/pcp\/pcj075","article-title":"Evidence that L\u2010glutamate can act as an exogenous signal to modulate root growth and branching in Arabidopsis thaliana","volume":"47","author":"Walch\u2010Liu P.","year":"2006","journal-title":"Plant Cell Physiol."},{"key":"e_1_2_10_219_1","doi-asserted-by":"crossref","DOI":"10.1016\/j.celrep.2025.116424","article-title":"Nitrate starvation inhibits stomatal opening via the long\u2010distance CEP1\u2013CEPR2 signaling cascade","volume":"44","author":"Wang L.Y.","year":"2025","journal-title":"Cell Rep."},{"key":"e_1_2_10_220_1","doi-asserted-by":"crossref","first-page":"4388","DOI":"10.1093\/plcell\/koae184","article-title":"NIN\u2010LIKE PROTEIN3.2 inhibits repressor Aux\/IAA14 expression and enhances root biomass in maize seedlings under low nitrogen","volume":"36","author":"Wang R.","year":"2024","journal-title":"Plant Cell"},{"key":"e_1_2_10_221_1","doi-asserted-by":"crossref","DOI":"10.1073\/pnas.2416345122","article-title":"OsNLP3 and OsPHR2 orchestrate direct and mycorrhizal pathways for nitrate uptake by regulating NAR2.1\u2013NRT2s complexes in rice","volume":"122","author":"Wang S.","year":"2025","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"e_1_2_10_222_1","doi-asserted-by":"crossref","first-page":"4373","DOI":"10.1093\/jxb\/erz554","article-title":"NRT1.1s in plants: Functions beyond nitrate transport","volume":"71","author":"Wang W.","year":"2020","journal-title":"J. Exp. Bot."},{"key":"e_1_2_10_223_1","doi-asserted-by":"crossref","DOI":"10.1002\/advs.202507919","article-title":"OsNRT1.1B\u2013OsCNGC14\/16\u2013Ca2+\u2013OsNLP3 pathway: Phosphorylation\u2010mediated maintenance of nitrogen homeostasis","volume":"12","author":"Wang X.","year":"2025","journal-title":"Adv. Sci."},{"key":"e_1_2_10_224_1","doi-asserted-by":"crossref","DOI":"10.1016\/j.plaphy.2023.107738","article-title":"Light induced shoot\u2010sourced transcription factor HY5 regulates the nitrate uptake of cotton by shoot\u2010to\u2010root signal transport","volume":"200","author":"Wang X.","year":"2023","journal-title":"Plant Physiol. Biochem."},{"key":"e_1_2_10_225_1","doi-asserted-by":"crossref","first-page":"3519","DOI":"10.1105\/tpc.20.00361","article-title":"The transcription factor NIGT1.2 modulates both phosphate uptake and nitrate influx during phosphate starvation in Arabidopsis and maize","volume":"32","author":"Wang X.","year":"2020","journal-title":"Plant Cell"},{"key":"e_1_2_10_226_1","doi-asserted-by":"crossref","first-page":"774","DOI":"10.1016\/j.molp.2021.02.005","article-title":"A transceptor\u2010channel complex couples nitrate sensing to calcium signaling in Arabidopsis","volume":"14","author":"Wang X.H.","year":"2021","journal-title":"Mol. Plant"},{"key":"e_1_2_10_227_1","doi-asserted-by":"crossref","first-page":"85","DOI":"10.1146\/annurev-arplant-042817-040056","article-title":"Nitrate transport, signaling, and use efficiency","volume":"69","author":"Wang Y.Y.","year":"2018","journal-title":"Annu. Rev. Plant Biol."},{"key":"e_1_2_10_228_1","doi-asserted-by":"crossref","first-page":"0178","DOI":"10.34133\/plantphenomics.0178","article-title":"The state of the art in root system architecture image analysis using artificial intelligence: A review","volume":"6","author":"Weihs B.J.","year":"2024","journal-title":"Plant Phenomics"},{"key":"e_1_2_10_229_1","doi-asserted-by":"crossref","DOI":"10.1038\/nplants.2015.38","article-title":"RNA transport: Delivering the message","volume":"1","author":"Westwood J.H.","year":"2015","journal-title":"Nat. Plants"},{"key":"e_1_2_10_230_1","doi-asserted-by":"crossref","first-page":"18625","DOI":"10.1073\/pnas.0809395105","article-title":"Plant CLE peptides from two distinct functional classes synergistically induce division of vascular cells","volume":"105","author":"Whitford R.","year":"2008","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"e_1_2_10_231_1","doi-asserted-by":"crossref","first-page":"97","DOI":"10.1046\/j.1365-313x.2000.00799.x","article-title":"Short root mutant of Lotus japonicus with a dramatically altered symbiotic phenotype","volume":"23","author":"Wopereis J.","year":"2001","journal-title":"Plant J."},{"key":"e_1_2_10_232_1","doi-asserted-by":"crossref","first-page":"3539","DOI":"10.1242\/dev.02521","article-title":"Temporal regulation of shoot development in Arabidopsis thaliana by miR156 and its target SPL3","volume":"133","author":"Wu G.","year":"2006","journal-title":"Development"},{"key":"e_1_2_10_233_1","doi-asserted-by":"crossref","DOI":"10.1016\/j.jplph.2024.154205","article-title":"OsEIL1 is involved in the response to heterogeneous high ammonium in rice: A split\u2010root analysis","volume":"295","author":"Wu J.","year":"2024","journal-title":"J. Plant Physiol."},{"key":"e_1_2_10_234_1","doi-asserted-by":"crossref","DOI":"10.1111\/tpj.70831","article-title":"Identification of symbiotic nitrogen fixation\u2010modulating factors in alfalfa and mechanism elucidation of MsHHO3","volume":"126","author":"Wu Y.","year":"2026","journal-title":"Plant J."},{"key":"e_1_2_10_235_1","doi-asserted-by":"crossref","first-page":"1362","DOI":"10.1111\/jipb.13467","article-title":"The alleviation of ammonium toxicity in plants","volume":"65","author":"Xiao C.B.","year":"2023","journal-title":"J. Integr. Plant Biol."},{"key":"e_1_2_10_236_1","first-page":"770","article-title":"EU\u2010GAN: A root inpainting network for improving 2D soil\u2010cultivated root phenotyping","volume":"15","author":"Xie S.","year":"2025","journal-title":"Artif. Intell. Agric."},{"key":"e_1_2_10_237_1","doi-asserted-by":"crossref","first-page":"1347","DOI":"10.1016\/j.cell.2006.06.011","article-title":"A protein kinase, interacting with two calcineurin B\u2010like proteins, regulates K+ transporter AKT1 in Arabidopsis","volume":"125","author":"Xu J.","year":"2006","journal-title":"Cell"},{"key":"e_1_2_10_238_1","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pgen.1006263","article-title":"Developmental functions of miR156\u2010regulated SQUAMOSA PROMOTER BINDING PROTEIN\u2010LIKE (SPL) genes in Arabidopsis thaliana","volume":"12","author":"Xu M.","year":"2016","journal-title":"PLoS Genet."},{"key":"e_1_2_10_239_1","doi-asserted-by":"crossref","first-page":"5390","DOI":"10.1093\/jxb\/erab224","article-title":"A C\u2010terminal encoded peptide, ZmCEP1, is essential for kernel development in maize","volume":"72","author":"Xu R.","year":"2021","journal-title":"J. Exp. Bot."},{"key":"e_1_2_10_240_1","doi-asserted-by":"crossref","first-page":"127","DOI":"10.1007\/s00425-025-04688-z","article-title":"Involvement of the miR156\/SPLs\/NLP7 modules in plant lateral root development and nitrogen uptake","volume":"261","author":"Xu R.","year":"2025","journal-title":"Planta"},{"key":"e_1_2_10_241_1","doi-asserted-by":"crossref","first-page":"546","DOI":"10.1093\/pcp\/pcz218","article-title":"A positive tropism of rice roots toward a nutrient source","volume":"61","author":"Yamazaki K.","year":"2019","journal-title":"Plant Cell Physiol."},{"key":"e_1_2_10_242_1","doi-asserted-by":"crossref","DOI":"10.3389\/fpls.2022.928729","article-title":"The mobile small RNAs: Important messengers for long\u2010distance communication in plants","volume":"13","author":"Yan Y.","year":"2022","journal-title":"Front. Plant Sci."},{"key":"e_1_2_10_243_1","doi-asserted-by":"crossref","DOI":"10.7554\/eLife.00260","article-title":"Sugar promotes vegetative phase change in Arabidopsis thaliana by repressing the expression of MIR156A and MIR156C","volume":"2","author":"Yang L.","year":"2013","journal-title":"eLife"},{"key":"e_1_2_10_244_1","doi-asserted-by":"crossref","first-page":"3658","DOI":"10.1093\/plcell\/koab226","article-title":"STOP1 activates NRT1.1\u2010mediated nitrate uptake to create a favorable rhizospheric pH for plant adaptation to acidity","volume":"33","author":"Ye J.Y.","year":"2021","journal-title":"Plant Cell"},{"key":"e_1_2_10_245_1","doi-asserted-by":"crossref","first-page":"673","DOI":"10.1111\/tpj.12919","article-title":"The role of miR156\/SPLs modules in Arabidopsis lateral root development","volume":"83","author":"Yu N.","year":"2015","journal-title":"Plant J."},{"key":"e_1_2_10_246_1","doi-asserted-by":"crossref","first-page":"751","DOI":"10.1093\/aob\/mcv127","article-title":"Root\u2010type\u2010specific plasticity in response to localized high nitrate supply in maize (Zea mays)","volume":"116","author":"Yu P.","year":"2015","journal-title":"Ann. Bot."},{"key":"e_1_2_10_247_1","doi-asserted-by":"crossref","first-page":"1783","DOI":"10.1104\/pp.15.01885","article-title":"Root type\u2010specific reprogramming of maize pericycle transcriptomes by local high nitrate results in disparate lateral root branching patterns","volume":"170","author":"Yu P.","year":"2016","journal-title":"Plant Physiol."},{"key":"e_1_2_10_248_1","doi-asserted-by":"crossref","first-page":"690","DOI":"10.1104\/pp.15.00888","article-title":"Cell type\u2010specific gene expression analyses by RNA sequencing reveal local high nitrate\u2010triggered lateral root initiation in shoot\u2010borne roots of maize by modulating auxin\u2010related cell cycle regulation","volume":"169","author":"Yu P.","year":"2015","journal-title":"Plant Physiol."},{"key":"e_1_2_10_249_1","doi-asserted-by":"crossref","first-page":"2673","DOI":"10.1016\/j.jia.2023.02.016","article-title":"Integrating microRNAs and mRNAs reveals the hormones synthesis and signal transduction of maize under different N rates","volume":"22","author":"Yue K.","year":"2023","journal-title":"J. Integr. Agric."},{"key":"e_1_2_10_250_1","doi-asserted-by":"crossref","first-page":"407","DOI":"10.1126\/science.279.5349.407","article-title":"An Arabidopsis MADS box gene that controls nutrient\u2010induced changes in root architecture","volume":"279","author":"Zhang H.","year":"1998","journal-title":"Science"},{"key":"e_1_2_10_251_1","first-page":"1560","article-title":"Beyond nitrate transport: AtNRT2.4 responds to local and systemic nitrogen signaling in Arabidopsis","volume":"25","author":"Zhang H.F.","year":"2025","journal-title":"BMC Plant Biol."},{"key":"e_1_2_10_252_1","doi-asserted-by":"crossref","first-page":"2329","DOI":"10.1093\/jxb\/erm114","article-title":"Signalling mechanisms underlying the morphological responses of the root system to nitrogen in Arabidopsis thaliana","volume":"58","author":"Zhang H.M.","year":"2007","journal-title":"J. Exp. Bot."},{"key":"e_1_2_10_253_1","doi-asserted-by":"crossref","first-page":"3274","DOI":"10.1038\/ncomms4274","article-title":"Arabidopsis ABCG14 protein controls the acropetal translocation of root\u2010synthesized cytokinins","volume":"5","author":"Zhang K.","year":"2014","journal-title":"Nat. Commun."},{"key":"e_1_2_10_254_1","doi-asserted-by":"crossref","DOI":"10.3389\/fpls.2022.869888","article-title":"Control of root stem cell differentiation and lateral root emergence by CLE16\/17 peptides in Arabidopsis","volume":"13","author":"Zhang L.","year":"2022","journal-title":"Front. Plant Sci."},{"key":"e_1_2_10_255_1","doi-asserted-by":"crossref","first-page":"1627","DOI":"10.1111\/pce.13992","article-title":"Shoot\u2010derived miR2111 controls legume root and nodule development","volume":"44","author":"Zhang M.","year":"2021","journal-title":"Plant Cell Environ."},{"key":"e_1_2_10_256_1","doi-asserted-by":"crossref","DOI":"10.1016\/j.xplc.2022.100468","article-title":"Arabidopsis ABCG14 forms a homodimeric transporter for multiple cytokinins and mediates long\u2010distance transport of isopentenyladenine\u2010type cytokinins","volume":"4","author":"Zhao J.","year":"2023","journal-title":"Plant Commun."},{"key":"e_1_2_10_257_1","doi-asserted-by":"crossref","first-page":"2111","DOI":"10.1093\/plphys\/kiab188","article-title":"Phloem unloading via the apoplastic pathway is essential for shoot distribution of root\u2010synthesized cytokinins","volume":"186","author":"Zhao J.","year":"2021","journal-title":"Plant Physiol."},{"key":"e_1_2_10_258_1","doi-asserted-by":"crossref","DOI":"10.1016\/j.xplc.2024.100936","article-title":"Spatially distributed cytokinins: Metabolism, signaling, and transport","volume":"5","author":"Zhao J.Z.","year":"2024","journal-title":"Plant Commun."},{"key":"e_1_2_10_259_1","doi-asserted-by":"crossref","first-page":"6166","DOI":"10.3390\/ijms20246166","article-title":"A regulatory network for miR156\u2013SPL module in Arabidopsis thaliana","volume":"20","author":"Zheng C.","year":"2019","journal-title":"Int. J. Mol. Sci."},{"key":"e_1_2_10_260_1","doi-asserted-by":"crossref","first-page":"3101","DOI":"10.3390\/agronomy12123101","article-title":"Responses of maize (Zea mays L.) roots to nitrogen heterogeneity and intraspecific competition: Evidence from a pot experiment using the \u2018root splitting\u2019 approach","volume":"12","author":"Zhou S.","year":"2022","journal-title":"Agronomy"},{"key":"e_1_2_10_261_1","doi-asserted-by":"crossref","first-page":"2917","DOI":"10.1111\/pbi.70539","article-title":"Machine learning\u2010driven construction of high\u2010yielding cucumber plant architectures in greenhouse environments","volume":"24","author":"Zhu C.","year":"2026","journal-title":"Plant Biotechnol. J."},{"key":"e_1_2_10_262_1","doi-asserted-by":"crossref","first-page":"2855","DOI":"10.1105\/tpc.20.00248","article-title":"A CEP peptide receptor\u2010like kinase regulates auxin biosynthesis and ethylene signaling to coordinate root growth and symbiotic nodulation in Medicago truncatula","volume":"32","author":"Zhu F.","year":"2020","journal-title":"Plant Cell"},{"key":"e_1_2_10_263_1","doi-asserted-by":"crossref","first-page":"2106","DOI":"10.1016\/j.jia.2024.02.010","article-title":"Post\u2010anthesis dry matter production and leaf nitrogen distribution are associated with root\u2010derived cytokinins gradient in rice","volume":"24","author":"Zhu K.","year":"2025","journal-title":"J. Integr. Agric."}],"container-title":["Journal of Integrative Plant Biology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1111\/jipb.70367","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/full-xml\/10.1111\/jipb.70367","content-type":"application\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1111\/jipb.70367","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,8,13]],"date-time":"2026-08-13T12:30:52Z","timestamp":1786624252000},"score":1,"resource":{"primary":{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/jipb.70367"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,8,13]]},"references-count":262,"alternative-id":["10.1111\/jipb.70367"],"URL":"https:\/\/doi.org\/10.1111\/jipb.70367","archive":["Portico"],"relation":{},"ISSN":["1672-9072","1744-7909"],"issn-type":[{"value":"1672-9072","type":"print"},{"value":"1744-7909","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,8,13]]},"assertion":[{"value":"2026-04-02","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2026-07-24","order":2,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2026-08-13","order":3,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}],"article-number":"jipb.70367"}}