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We asked whether profiling plasma bile acids could reveal compensatory mechanisms and track genetic and clinical status.<\/jats:p><\/jats:sec><jats:sec><jats:title>Methods<\/jats:title><jats:p>We compared plasma bile acids in 17 <jats:italic><jats:styled-content style=\"fixed-case\">ABCB<\/jats:styled-content>11<\/jats:italic>\u2010mutated patients, 35 healthy controls and 12 genetically undiagnosed cholestasis patients by ultra\u2010high\u2010performance liquid chromatography\/multiple\u2010reaction monitoring\u2010mass spectrometry (<jats:styled-content style=\"fixed-case\">UPLC<\/jats:styled-content>\/<jats:styled-content style=\"fixed-case\">MRM<\/jats:styled-content>\u2010<jats:styled-content style=\"fixed-case\">MS<\/jats:styled-content>). We developed an index to rank bile acid hydrophobicity, and thus toxicity, based on <jats:styled-content style=\"fixed-case\">LC<\/jats:styled-content> retention times. We recruited 42 genetically diagnosed hereditary cholestasis patients, of whom 12 were presumed to have impaired <jats:styled-content style=\"fixed-case\">BSEP<\/jats:styled-content> function but carried mutations in genes other than <jats:italic><jats:styled-content style=\"fixed-case\">ABCB<\/jats:styled-content>11<\/jats:italic>, and 8 healthy controls, for further verification.<\/jats:p><\/jats:sec><jats:sec><jats:title>Results<\/jats:title><jats:p>The overall hydrophobicity indices of total bile acids in both the <jats:italic><jats:styled-content style=\"fixed-case\">ABCB<\/jats:styled-content>11<\/jats:italic>\u2010mutated group (11.89\u00a0\u00b1\u00a01.07\u00a0min) and the undiagnosed cholestasis group (11.46\u00a0\u00b1\u00a01.07\u00a0min) were lower than those of healthy controls (13.69\u00a0\u00b1\u00a00.77\u00a0min) (both p\u00a0&lt;\u00a00.005). This was owing to increased bile acid modifications. Secondary bile acids were detected in patients without <jats:styled-content style=\"fixed-case\">BSEP<\/jats:styled-content> expression, suggesting biliary bile acid secretion through alternative routes. A diagnostic panel comprising lithocholic acid (<jats:styled-content style=\"fixed-case\">LCA<\/jats:styled-content>), tauro\u2010<jats:styled-content style=\"fixed-case\">LCA<\/jats:styled-content>, glyco\u2010<jats:styled-content style=\"fixed-case\">LCA<\/jats:styled-content> and hyocholic acid was identified that could differentiate the <jats:italic><jats:styled-content style=\"fixed-case\">ABCB<\/jats:styled-content>11<\/jats:italic>\u2010mutated cohort from healthy controls and undiagnosed cholestasis patients (<jats:styled-content style=\"fixed-case\">AUC<\/jats:styled-content>=0.946, p\u00a0&lt;\u00a00.0001) and, in non\u2010<jats:italic><jats:styled-content style=\"fixed-case\">ABCB<\/jats:styled-content>11<\/jats:italic>\u2010mutated cholestasis patients, could distinguish <jats:styled-content style=\"fixed-case\">BSEP<\/jats:styled-content> dysfunction from normal <jats:styled-content style=\"fixed-case\">BSEP<\/jats:styled-content> function (9\/12 vs 0\/38, p\u00a0&lt;\u00a00.0000001).<\/jats:p><\/jats:sec><jats:sec><jats:title>Conclusions<\/jats:title><jats:p>Profiling of plasma bile acids has provided insights into cholestasis alleviation and may be useful for the clinical management of cholestatic diseases.<\/jats:p><\/jats:sec>","DOI":"10.1111\/liv.13714","type":"journal-article","created":{"date-parts":[[2018,2,7]],"date-time":"2018-02-07T16:06:43Z","timestamp":1518019603000},"page":"1676-1685","source":"Crossref","is-referenced-by-count":20,"title":["Comprehensive bile acid profiling in hereditary intrahepatic cholestasis: Genetic and clinical correlations"],"prefix":"10.1111","volume":"38","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-0858-2151","authenticated-orcid":false,"given":"Teng","family":"Liu","sequence":"first","affiliation":[{"name":"Department of Pediatrics Jinshan Hospital of Fudan University  Shanghai China"},{"name":"BC Cancer Agency  Vancouver BC Canada"},{"name":"University of Victoria\u2212Genome BC 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