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The evolutionary outcomes of such secondary contacts may be diverse (e.g. adaptive introgression from or into the introduced species) but are not yet well examined in the wild. The recent secondary contact between the non\u2010native sea squirt\n                    <jats:italic>Ciona robusta<\/jats:italic>\n                    (formerly known as\n                    <jats:italic>C.\u00a0intestinalis<\/jats:italic>\n                    type A) and its native congener\n                    <jats:italic>C.\u00a0intestinalis<\/jats:italic>\n                    (formerly known as\n                    <jats:italic>C<\/jats:italic>\n                    .\u00a0\n                    <jats:italic>intestinalis<\/jats:italic>\n                    type B), in the Western English Channel, provides an excellent case study to examine. To examine contemporary hybridization between the two species, we developed a panel of 310 ancestry\u2010informative\n                    <jats:styled-content style=\"fixed-case\">SNP<\/jats:styled-content>\n                    s from a population transcriptomic study. Hybridization rates were examined on 449 individuals sampled in eight sites from the sympatric range and five sites from allopatric ranges. The results clearly showed an almost complete absence of contemporary hybridization between the two species in syntopic localities, with only one\u2010first\u2010generation hybrid and no other genotype compatible with recent backcrosses. Despite the almost lack of contemporary hybridization, shared polymorphisms were observed in sympatric and allopatric populations of both species. Furthermore, one allopatric population from\n                    <jats:styled-content style=\"fixed-case\">SE<\/jats:styled-content>\n                    Pacific exhibited a higher rate of shared polymorphisms compared to all other\n                    <jats:italic>C. robusta<\/jats:italic>\n                    populations. Altogether, these results indicate that the observed level of shared polymorphism is more probably the outcome of ancient gene flow spread afterwards at a worldwide scale. They also emphasize efficient reproductive barriers preventing hybridization between introduced and native species, which suggests hybridization should not impede too much the expansion and the establishment of the non\u2010native species in its introduction range.\n                  <\/jats:p>","DOI":"10.1111\/mec.13854","type":"journal-article","created":{"date-parts":[[2016,9,23]],"date-time":"2016-09-23T10:22:58Z","timestamp":1474626178000},"page":"5527-5542","update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":54,"title":["Distinguishing contemporary hybridization from past introgression with postgenomic ancestry\u2010informative\n                    <scp>SNP<\/scp>\n                    s in strongly differentiated\n                    <i>Ciona<\/i>\n                    species"],"prefix":"10.1111","volume":"25","author":[{"given":"Sarah","family":"Bouchemousse","sequence":"first","affiliation":[{"name":"UPMC Univ Paris 6 UMR 7144, Equipe DIVCO Sorbonne Universit\u00e9s Station Biologique de Roscoff Place Georges Teissier 29680 Roscoff France"},{"name":"CNRS, UMR 7144 Adaptation et Diversit\u00e9 en Milieu Marin Station Biologique de Roscoff Place Georges Teissier 29680 Roscoff France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Cathy","family":"Liautard\u2010Haag","sequence":"additional","affiliation":[{"name":"Station Marine \u2013 OSU OREME Universit\u00e9 de Montpellier 2 Rue des Chantiers 34200 S\u00e8te France"},{"name":"CNRS\u2010UM\u2010IRD\u2010EPHE, UMR 5554 Institut des Sciences de l'Evolution Place Eug\u00e8ne Bataillon 34095 Montpellier France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1856-3197","authenticated-orcid":false,"given":"Nicolas","family":"Bierne","sequence":"additional","affiliation":[{"name":"Station Marine \u2013 OSU OREME Universit\u00e9 de Montpellier 2 Rue des Chantiers 34200 S\u00e8te France"},{"name":"CNRS\u2010UM\u2010IRD\u2010EPHE, UMR 5554 Institut des Sciences de l'Evolution Place Eug\u00e8ne Bataillon 34095 Montpellier France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fr\u00e9d\u00e9rique","family":"Viard","sequence":"additional","affiliation":[{"name":"UPMC Univ Paris 6 UMR 7144, Equipe DIVCO Sorbonne Universit\u00e9s Station Biologique de Roscoff Place Georges Teissier 29680 Roscoff France"},{"name":"CNRS, UMR 7144 Adaptation et Diversit\u00e9 en Milieu Marin Station Biologique de Roscoff Place Georges Teissier 29680 Roscoff 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