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Organismal stress tolerance thresholds are life stage specific, can vary across levels of biological organisation and also depend on natural environmental variability. Here, we exposed the early life stages of <jats:italic>Pocillopora acuta<\/jats:italic> in K\u0101ne\u2018ohe Bay, Hawai\u2018i, USA, a common reef\u2010building coral throughout the Pacific, to projected ocean warming and acidification scenarios. We measured ecological, physiological, biomineralisation and molecular responses across the critical transition from larvae to newly settled recruits following 6\u2009days of exposure to diel fluctuations in temperature and pH in Control (26.8\u00b0C\u201327.9\u00b0C, 7.82\u20137.96 pH<jats:sub>Total<\/jats:sub>), Mid (28.4\u00b0C\u201329.5\u00b0C, 7.65\u20137.79 pH<jats:sub>Total<\/jats:sub>) and High conditions (30.2\u00b0C\u201331.5\u00b0C, 7.44\u20137.59 pH<jats:sub>Total<\/jats:sub>). We found that <jats:styled-content style=\"fixed-case\"><jats:italic>P. acuta<\/jats:italic><\/jats:styled-content> early life stages are capable of survival, settlement and calcification under all scenarios. The High conditions, however, caused a significant reduction in survival and settlement capacity, with changes in the skeletal fibre deposition patterns. Although there was limited impact on the expression of biomineralisation genes, exposure to High conditions resulted in strong transcriptomic responses including depressed metabolism, reduced ATP production and increased activity of DNA damage\u2010repair processes, indicative of a compromised metabolic state. Collectively, our findings demonstrate that coral juveniles living in environments with large diurnal fluctuations in seawater temperature and pH, such as K\u0101ne\u2018ohe Bay, can tolerate exposure to moderate projected increased temperature and reduced pH. However, under more severe environmental conditions, significant negative effects on coral cellular metabolism and overall organismal survival jeopardise species fitness and recruitment.<\/jats:p>","DOI":"10.1111\/mec.70116","type":"journal-article","created":{"date-parts":[[2025,9,29]],"date-time":"2025-09-29T09:39:39Z","timestamp":1759138779000},"update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":1,"title":["Thermal and Acidification Gradients Reveal Tolerance Thresholds in <i>Pocillopora acuta<\/i> Recruits"],"prefix":"10.1111","volume":"34","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-5499-9786","authenticated-orcid":false,"given":"Jill","family":"Ashey","sequence":"first","affiliation":[{"name":"Department of Biological Sciences University of Rhode Island  Kingston Rhode Island USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Federica","family":"Scucchia","sequence":"additional","affiliation":[{"name":"Department of Marine Biology, Leon H. 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