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Despite its ecological and medicinal significance, genomic and transcriptomic resources for the species are limited.\n                        <\/jats:p>\n                      <\/jats:list-item>\n                      <jats:list-item>\n                        <jats:p>\n                          We generated a chromosome\u2010level, haplotype\u2010resolved reference genome assembly and annotation for\n                          <jats:italic>M. flabellifolia<\/jats:italic>\n                          and conducted transcriptomic profiling across a natural dehydration\u2013rehydration time course in the field. Genome architecture and sex determination were characterized, and co\u2010expression network and\n                          <jats:italic>cis<\/jats:italic>\n                          \u2010regulatory element (CRE) enrichment analyses were used to investigate dynamic responses to desiccation.\n                        <\/jats:p>\n                      <\/jats:list-item>\n                      <jats:list-item>\n                        <jats:p>The 1.28\u2010Gb genome exhibits unusually consistent chromatin architecture with unique chromosome organization across highly divergent haplotypes. We identified an XY sexual system with a small sex\u2010determining region on Chromosome 8. Transcriptomic responses varied with dehydration severity, pointing to early suppression of growth, progressive activation of protective mechanisms, and subsequent return to homeostasis upon rehydration. Late embryogenesis abundant and early light\u2010induced protein transcripts were dynamically regulated and showed enrichment of abscisic acid and stress\u2010responsive CREs pointing toward conserved responses.<\/jats:p>\n                      <\/jats:list-item>\n                      <jats:list-item>\n                        <jats:p>\n                          Together, this study provides foundational resources for understanding the genomic architecture and reproductive biology of\n                          <jats:italic>M. flabellifolia<\/jats:italic>\n                          and offers new insights into the mechanisms of desiccation tolerance.\n                        <\/jats:p>\n                      <\/jats:list-item>\n                    <\/jats:list>\n                  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