{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,5]],"date-time":"2026-10-05T04:51:30Z","timestamp":1791175890372,"version":"4.1.0"},"reference-count":65,"publisher":"Wiley","issue":"3","license":[{"start":{"date-parts":[[2026,8,11]],"date-time":"2026-08-11T00:00:00Z","timestamp":1786406400000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/4.0\/"},{"start":{"date-parts":[[2026,8,11]],"date-time":"2026-08-11T00:00:00Z","timestamp":1786406400000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/doi.wiley.com\/10.1002\/tdm_license_1.1"}],"content-domain":{"domain":["nph.onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["New Phytologist"],"published-print":{"date-parts":[[2026,11]]},"abstract":"<jats:title>Summary<\/jats:title>\n                  <jats:p>\n                    <jats:list list-type=\"bullet\">\n                      <jats:list-item>\n                        <jats:p>\n                          The Farquhar\u2013von Caemmerer\u2013Berry model is used as the standard to investigate leaf photosynthetic CO\n                          <jats:sub>2<\/jats:sub>\n                          \u2010 and light\u2010responses in plant physiology. The model was developed for C\n                          <jats:sub>3<\/jats:sub>\n                          photosynthesis with the native photorespiratory cycle. However, it is also frequently used to parameterize photosynthesis of plants with synthetic photorespiratory bypasses.\n                        <\/jats:p>\n                      <\/jats:list-item>\n                      <jats:list-item>\n                        <jats:p>\n                          Here, we point out that this latter practice is not advised for two reasons. First, unlike the native photorespiratory cycle, synthetic bypasses alter amounts and location of photorespiratory CO\n                          <jats:sub>2<\/jats:sub>\n                          release. Second, requirements for reductants and ATP are altered by bypass pathways. We extend the model to account for these changes.\n                        <\/jats:p>\n                      <\/jats:list-item>\n                      <jats:list-item>\n                        <jats:p>\n                          Estimates of both\n                          <jats:italic>V<\/jats:italic>\n                          <jats:sub>cmax<\/jats:sub>\n                          (Rubisco carboxylation capacity) and\n                          <jats:italic>J<\/jats:italic>\n                          <jats:sub>max<\/jats:sub>\n                          (light\u2010saturated linear electron transport rate) differ between original and extended models, and the difference is greater for\n                          <jats:italic>V<\/jats:italic>\n                          <jats:sub>cmax<\/jats:sub>\n                          than for\n                          <jats:italic>J<\/jats:italic>\n                          <jats:sub>max<\/jats:sub>\n                          . Model analyses show that 17 bypasses reported so far perform contrastingly in terms of photosynthetic efficiency parameters (carboxylation efficiency and quantum yield) and photosynthetic capacity parameter (light\u2010saturated photosynthetic rate). The amount rather than the location of photorespiratory CO\n                          <jats:sub>2<\/jats:sub>\n                          release largely determines the benefit of bypasses.\n                        <\/jats:p>\n                      <\/jats:list-item>\n                      <jats:list-item>\n                        <jats:p>\n                          Full\u2010decarboxylating bypasses, which have been claimed to act as a CO\n                          <jats:sub>2<\/jats:sub>\n                          \u2010concentrating mechanism around Rubisco, are least efficient, whereas a carbon\u2010fixing bypass is most promising for improving C\n                          <jats:sub>3<\/jats:sub>\n                          photosynthesis.\n                        <\/jats:p>\n                      <\/jats:list-item>\n                    <\/jats:list>\n                  <\/jats:p>","DOI":"10.1111\/nph.71495","type":"journal-article","created":{"date-parts":[[2026,8,12]],"date-time":"2026-08-12T04:27:33Z","timestamp":1786508853000},"page":"1327-1342","update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Extending the Farquhar\u2013von Caemmerer\u2013Berry photosynthesis model to account for various photorespiratory bypasses"],"prefix":"10.1111","volume":"252","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-8273-8022","authenticated-orcid":false,"given":"Xinyou","family":"Yin","sequence":"first","affiliation":[{"name":"Centre for Crop Systems Analysis, Department of Plant Sciences Wageningen University &amp; Research  PO Box 430 6700 AK Wageningen the Netherlands"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-2961-9897","authenticated-orcid":false,"given":"Kaining","family":"Jin","sequence":"additional","affiliation":[{"name":"Centre for Crop Systems Analysis, Department of Plant Sciences Wageningen University &amp; Research  PO Box 430 6700 AK Wageningen the Netherlands"},{"name":"Biotechnology Research Institute Chinese Academy of Agricultural Sciences  Beijing 100081 China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0006-6806-3237","authenticated-orcid":false,"given":"Guoxin","family":"Chen","sequence":"additional","affiliation":[{"name":"Biotechnology Research Institute Chinese Academy of Agricultural Sciences  Beijing 100081 China"},{"name":"Beijing Life Science Academy  Beijing 102200 China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-8787-3901","authenticated-orcid":false,"given":"Tiegang","family":"Lu","sequence":"additional","affiliation":[{"name":"Biotechnology Research Institute Chinese Academy of Agricultural Sciences  Beijing 100081 China"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2026,8,11]]},"reference":[{"key":"e_1_2_8_2_1","doi-asserted-by":"publisher","DOI":"10.1038\/nplants.2015.220"},{"key":"e_1_2_8_3_1","doi-asserted-by":"publisher","DOI":"10.1007\/s11816-016-0403-x"},{"key":"e_1_2_8_4_1","doi-asserted-by":"publisher","DOI":"10.1093\/aob\/mcad075"},{"key":"e_1_2_8_5_1","doi-asserted-by":"publisher","DOI":"10.3389\/fbioe.2016.00031"},{"key":"e_1_2_8_6_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41586-019-1748-4"},{"key":"e_1_2_8_7_1","doi-asserted-by":"publisher","DOI":"10.1016\/S0021-9258(19)45507-5"},{"key":"e_1_2_8_8_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-3040.2012.02567.x"},{"key":"e_1_2_8_9_1","doi-asserted-by":"publisher","DOI":"10.1111\/pce.12098"},{"key":"e_1_2_8_10_1","doi-asserted-by":"publisher","DOI":"10.1007\/BF00384257"},{"key":"e_1_2_8_11_1","doi-asserted-by":"publisher","DOI":"10.1186\/1472-6750-11-111"},{"key":"e_1_2_8_12_1","doi-asserted-by":"publisher","DOI":"10.1111\/pbi.13750"},{"key":"e_1_2_8_13_1","doi-asserted-by":"publisher","DOI":"10.1111\/pbi.70258"},{"key":"e_1_2_8_14_1","doi-asserted-by":"publisher","DOI":"10.1093\/plcell\/koaf015"},{"key":"e_1_2_8_15_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.cj.2025.03.001"},{"key":"e_1_2_8_16_1","doi-asserted-by":"publisher","DOI":"10.3389\/fpls.2019.00702"},{"key":"e_1_2_8_17_1","doi-asserted-by":"publisher","DOI":"10.1186\/s13068-015-0357-1"},{"key":"e_1_2_8_18_1","doi-asserted-by":"crossref","unstructured":"EvansJ.2019.Where did the carbon go? 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