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Despite the apparently simple function of the esophagus, we still struggle to better understand its physiology and pathophysiology. The assessment of large data sets and application of multiscale mathematical organ models have gained attention as part of the Physiome Project. This has long been recognized in cardiology but has only recently gained attention for the gastrointestinal(GI) tract. The term \u201cesophagiome\u201d implies a holistic assessment of esophageal function, from cellular and muscle physiology to the mechanical responses that transport and mix fluid contents. These anatomical, mechanical, and physiological models underlie the development of a \u201cvirtual esophagus\u201d modeling framework to characterize and analyze function and disease. Functional models incorporate anatomical details with sensory\u2013motor responses, especially related to biomechanical functions such as bolus transport. Our review builds on previous reviews and focuses on assessment of detailed anatomical and geometric data using advanced imaging technology for evaluation of gastro\u2010esophageal reflux disease (GERD), and on esophageal mechanophysiology assessed using technologies that distend the esophagus. Integration of mechanics\u2010 and physiology\u2010based analysis is a useful characteristic of the esophagiome. Experimental data on pressures and geometric characteristics are useful for the validation of mathematical and computer models of the esophagus that may provide predictions of novel endoscopic, surgical, and pharmaceutical treatment options.<\/jats:p>","DOI":"10.1111\/nyas.13869","type":"journal-article","created":{"date-parts":[[2018,6,11]],"date-time":"2018-06-11T05:56:30Z","timestamp":1528696590000},"page":"5-20","update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":3,"title":["The esophagiome: integrated anatomical, mechanical, and physiological analysis of the esophago\u2010gastric segment"],"prefix":"10.1111","volume":"1434","author":[{"given":"Jingbo","family":"Zhao","sequence":"first","affiliation":[{"name":"GIOME Academy, Department of Clinical Medicine Aarhus University  Aarhus Denmark"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Barry","family":"McMahon","sequence":"additional","affiliation":[{"name":"Trinity Academic Gastroenterology Group Tallaght Hospital and Trinity College  Dublin Ireland"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mark","family":"Fox","sequence":"additional","affiliation":[{"name":"Abdominal Center: Gastroenterology  St. Claraspital Basel Switzerland"},{"name":"Neurogastroenterology and Motility Research Group University Hospital Z\u00fcrich  Z\u00fcrich Switzerland"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Hans","family":"Gregersen","sequence":"additional","affiliation":[{"name":"GIOME, Department of Surgery Prince of Wales Hospital and Chinese University of Hong Kong  Shatin Hong Kong SAR"},{"name":"California Medical Innovations Institute  San Diego California"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"311","published-online":{"date-parts":[[2018,6,10]]},"reference":[{"key":"e_1_2_7_2_1","doi-asserted-by":"publisher","DOI":"10.1136\/gutjnl-2012-304269"},{"key":"e_1_2_7_3_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.pbiomolbio.2004.02.006"},{"key":"e_1_2_7_4_1","doi-asserted-by":"publisher","DOI":"10.1111\/nyas.13089"},{"key":"e_1_2_7_5_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2982.2006.00770.x"},{"key":"e_1_2_7_6_1","doi-asserted-by":"publisher","DOI":"10.1002\/wsbm.1218"},{"key":"e_1_2_7_7_1","doi-asserted-by":"publisher","DOI":"10.1002\/wsbm.1324"},{"key":"e_1_2_7_8_1","doi-asserted-by":"publisher","DOI":"10.1098\/rspb.2004.2886"},{"key":"e_1_2_7_9_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.jbiomech.2006.06.006"},{"key":"e_1_2_7_10_1","doi-asserted-by":"publisher","DOI":"10.1098\/rsta.2010.0090"},{"key":"e_1_2_7_11_1","first-page":"635","article-title":"An anatomically based mathematical model of the gastroesophageal junction","volume":"1","author":"Yassi R.","year":"2004","journal-title":"Conf. 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