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This study aimed to isolate stress\u2010tolerant, plant growth\u2010promoting bacterium, characterise it using high\u2010throughput next\u2010generation sequencing and expression profiling and assess its potential in improving soybean (<jats:italic>Glycine max<\/jats:italic> (L.) Merr.) growth and development under lead (Pb) stress. We identified <jats:italic>Bacillus cereus<\/jats:italic> SH\u201010 as a metal\u2010resistant rhizobacterium capable of tolerating Pb concentrations exceeding 75\u2009mg\/kg. When inoculated into soybean plants under Pb stress, SH\u201010 significantly improved phosphorus and calcium uptake and reduced Pb accumulation. This reduction was associated with increased expression of the stress signalling protein <jats:italic>GmCYP82A3<\/jats:italic>. SH\u201010 also modulated the phytohormone balance by lowering abscisic acid (ABA) levels in shoots and enhancing salicylic acid (SA) biosynthesis. These hormonal shifts corresponded with the downregulation of ABA biosynthesis\u2010related genes (<jats:italic>GmNCED1<\/jats:italic>, <jats:italic>NCED3<\/jats:italic>, <jats:italic>GmbZIP)<\/jats:italic> and the upregulation of the SA biosynthesis gene <jats:italic>GmPAL1<\/jats:italic>. Furthermore, SH\u201010 significantly mitigated oxidative stress in Pb\u2010exposed plants, while enhancing antioxidant activities. The study also identified two phytohormone biosynthesis pathways in rhizobacteria: (1) Terpenes \u2192 \u03b2\u2010carotene \u2192 Xanthoxin \u2192 ABA, and (2) Terpenes \u2192 Geranylgeranyl diphosphate \u2192 gibberellic acid. These findings highlight <jats:italic>Bacillus cereus<\/jats:italic> SH\u201010 as a promising biofertiliser that alleviates Pb toxicity in crops.<\/jats:p>","DOI":"10.1111\/pce.70052","type":"journal-article","created":{"date-parts":[[2025,7,3]],"date-time":"2025-07-03T00:54:29Z","timestamp":1751504069000},"page":"7548-7561","update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":8,"title":["Genomic and Functional Insights Into <i>Bacillus cereus<\/i> SH\u201010 for Mitigating Lead Stress in Soybean"],"prefix":"10.1111","volume":"48","author":[{"given":"Shifa","family":"Shaffique","sequence":"first","affiliation":[{"name":"School of Applied Bioscience Kyungpook National University Daegu South Korea"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4368-9357","authenticated-orcid":false,"given":"Muhammad","family":"Farooq","sequence":"additional","affiliation":[{"name":"Department of Plant Sciences College of Agricultural and Marine Sciences Sultan Qaboos University Al\u2010Khoudh Muscat Oman"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Arjun","family":"Adhikari","sequence":"additional","affiliation":[{"name":"School of Applied Bioscience Kyungpook National University Daegu South Korea"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Muhammad Aaqil","family":"Khan","sequence":"additional","affiliation":[{"name":"School of Applied Bioscience Kyungpook National University Daegu South Korea"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sang\u2010Mo","family":"Kang","sequence":"additional","affiliation":[{"name":"School of Applied Bioscience Kyungpook National University Daegu South Korea"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"In\u2010Jung","family":"Lee","sequence":"additional","affiliation":[{"name":"School of Applied Bioscience Kyungpook National University Daegu South Korea"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2025,7,2]]},"reference":[{"key":"e_1_2_11_2_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.stress.2024.100482"},{"key":"e_1_2_11_3_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.ecoenv.2017.11.054"},{"key":"e_1_2_11_4_1","doi-asserted-by":"publisher","DOI":"10.3390\/cells12151960"},{"key":"e_1_2_11_5_1","doi-asserted-by":"publisher","DOI":"10.3390\/toxics9030042"},{"key":"e_1_2_11_6_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.jplph.2024.154370"},{"key":"e_1_2_11_7_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.algal.2023.103307"},{"key":"e_1_2_11_8_1","doi-asserted-by":"publisher","DOI":"10.1186\/s12870-023-04517-z"},{"key":"e_1_2_11_9_1","doi-asserted-by":"publisher","DOI":"10.3389\/fpls.2020.587785"},{"key":"e_1_2_11_10_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.ecoenv.2024.116194"},{"key":"e_1_2_11_11_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.mod.2014.11.001"},{"key":"e_1_2_11_12_1","doi-asserted-by":"publisher","DOI":"10.3390\/metabo13080884"},{"key":"e_1_2_11_13_1","doi-asserted-by":"publisher","DOI":"10.1590\/1807-1929\/agriambi.v21n5p327-332"},{"key":"e_1_2_11_14_1","doi-asserted-by":"publisher","DOI":"10.1002\/jobm.201300805"},{"key":"e_1_2_11_15_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-031-46146-0_5"},{"key":"e_1_2_11_16_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.ecoenv.2023.115377"},{"key":"e_1_2_11_17_1","doi-asserted-by":"publisher","DOI":"10.1007\/s11274-025-04253-6"},{"key":"e_1_2_11_18_1","doi-asserted-by":"publisher","DOI":"10.1007\/s10661-023-11061-8"},{"key":"e_1_2_11_19_1","doi-asserted-by":"publisher","DOI":"10.1007\/s11356-021-16241-y"},{"key":"e_1_2_11_20_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.hazl.2022.100064"},{"key":"e_1_2_11_21_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.niox.2016.12.010"},{"key":"e_1_2_11_22_1","doi-asserted-by":"publisher","DOI":"10.1007\/BF00196874"},{"key":"e_1_2_11_23_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-60761-702-0_16"},{"key":"e_1_2_11_24_1","doi-asserted-by":"publisher","DOI":"10.1080\/15592324.2020.1777372"},{"key":"e_1_2_11_25_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.ijbiomac.2022.12.311"},{"key":"e_1_2_11_26_1","first-page":"502","article-title":"Study the Heavy Metals Tolerance, Biosorption and Antibiotic Resistance of Bacillus cereus Isolated From Diesel Fuel Polluted Soil","volume":"4","author":"Ghaima K. 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