{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,6]],"date-time":"2026-10-06T00:58:01Z","timestamp":1791248281917,"version":"4.1.0"},"reference-count":83,"publisher":"Wiley","issue":"2","license":[{"start":{"date-parts":[[2025,3,16]],"date-time":"2025-03-16T00:00:00Z","timestamp":1742083200000},"content-version":"vor","delay-in-days":15,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100001665","name":"Agence Nationale de la Recherche","doi-asserted-by":"publisher","award":["16\u2010IDEX\u20100001 CAP 20\u201025"],"award-info":[{"award-number":["16\u2010IDEX\u20100001 CAP 20\u201025"]}],"id":[{"id":"10.13039\/501100001665","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001665","name":"Agence Nationale de la Recherche","doi-asserted-by":"publisher","award":["ANR\u201015\u2010CE21\u20100010"],"award-info":[{"award-number":["ANR\u201015\u2010CE21\u20100010"]}],"id":[{"id":"10.13039\/501100001665","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001665","name":"Agence Nationale de la Recherche","doi-asserted-by":"publisher","award":["CAP2025 Academy"],"award-info":[{"award-number":["CAP2025 Academy"]}],"id":[{"id":"10.13039\/501100001665","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100008530","name":"European Regional Development Fund","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100008530","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["Physiologia Plantarum"],"published-print":{"date-parts":[[2025,3]]},"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:p>\n                    Wheat responses to\n                    <jats:italic>F. graminearum<\/jats:italic>\n                    result in a deep and sharp reprogramming of a wide range of biological processes, including energy\u2010associated functions and related metabolisms. Although these impacts have been thoroughly described at the molecular scale through proteomics and transcriptomics studies, phenotypic studies are still needed to fill the gap between the observed molecular events and the actual impacts of the disease on the ecophysiological processes. Taking advantage of the gas exchange method, the effects of two\n                    <jats:italic>F. graminearum<\/jats:italic>\n                    strains of contrasting aggressiveness on spike's photosynthesis and respiration\u2010associated processes during an early infection time course were deeply characterized. Besides, an RNAseq\u2010based expression profiling of the genes involved in the photosynthesis, respiration and stomatal movement processes was also performed when plants were challenged using the same two fungal strains. In response to Fusarium head blight, CO\n                    <jats:sub>2<\/jats:sub>\n                    assimilation and CO\n                    <jats:sub>2<\/jats:sub>\n                    diffusion adjustments matched transcriptomic data, showing altered photosynthetic processes and sharp gene regulations unrelated to symptom development. In contrast, although ecophysiological characterization clearly demonstrated respiration adjustments along with the\n                    <jats:italic>F. graminearum<\/jats:italic>\n                    's infection process, the gene regulations involved were not fully captured transcriptionally. We demonstrated that combining gas exchange methods with transcriptomics is especially effective in enhancing and deepening our understanding of complex physiological adjustments, providing unique and complementary insights that cannot be predicted from a single approach.\n                  <\/jats:p>","DOI":"10.1111\/ppl.70150","type":"journal-article","created":{"date-parts":[[2025,3,17]],"date-time":"2025-03-17T02:28:26Z","timestamp":1742178506000},"update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":1,"title":["Unravelling ecophysiological and molecular adjustments in the photosynthesis\u2010respiration balance during\n                    <i>Fusarium graminearum<\/i>\n                    infection in wheat spikes"],"prefix":"10.1111","volume":"177","author":[{"given":"Florian","family":"Rocher","sequence":"first","affiliation":[{"name":"Universit\u00e9 Clermont Auvergne, INRAE, UMR 1095 G\u00e9n\u00e9tique Diversit\u00e9 Ecophysiologie des C\u00e9r\u00e9ales  Clermont\u2010Ferrand France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Pierre","family":"Bancal","sequence":"additional","affiliation":[{"name":"Universit\u00e9 Paris\u2010Saclay, INRAE, AgroParisTech, UMR EcoSys  Palaiseau France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Alain","family":"Fortineau","sequence":"additional","affiliation":[{"name":"Universit\u00e9 Paris\u2010Saclay, INRAE, AgroParisTech, UMR EcoSys  Palaiseau France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"G\u00e9raldine","family":"Philippe","sequence":"additional","affiliation":[{"name":"Universit\u00e9 Clermont Auvergne, INRAE, UMR 1095 G\u00e9n\u00e9tique Diversit\u00e9 Ecophysiologie des C\u00e9r\u00e9ales  Clermont\u2010Ferrand France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Philippe","family":"Label","sequence":"additional","affiliation":[{"name":"Universit\u00e9 Clermont Auvergne, INRAE, UMR 547 PIAF, Physique et Physiologie Int\u00e9gratives de l'Arbre en environnement Fluctuant  Aubi\u00e8re Cedex France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Thierry","family":"Langin","sequence":"additional","affiliation":[{"name":"Universit\u00e9 Clermont Auvergne, INRAE, UMR 1095 G\u00e9n\u00e9tique Diversit\u00e9 Ecophysiologie des C\u00e9r\u00e9ales  Clermont\u2010Ferrand France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9410-0827","authenticated-orcid":false,"given":"Ludovic","family":"Bonhomme","sequence":"additional","affiliation":[{"name":"Universit\u00e9 Clermont Auvergne, INRAE, UMR 1095 G\u00e9n\u00e9tique Diversit\u00e9 Ecophysiologie des C\u00e9r\u00e9ales  Clermont\u2010Ferrand France"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2025,3,16]]},"reference":[{"key":"e_1_2_8_2_1","doi-asserted-by":"publisher","DOI":"10.2135\/cropsci2003.1782"},{"key":"e_1_2_8_3_1","doi-asserted-by":"publisher","DOI":"10.1080\/07060661.2018.1476411"},{"key":"e_1_2_8_4_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-59745-535-0_4"},{"key":"e_1_2_8_5_1","doi-asserted-by":"publisher","DOI":"10.1016\/S0733-5210(95)80008-5"},{"key":"e_1_2_8_6_1","doi-asserted-by":"publisher","DOI":"10.1094\/MPMI-11-19-0332-R"},{"key":"e_1_2_8_7_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.devcel.2015.05.011"},{"key":"e_1_2_8_8_1","unstructured":"Carlson M. &Pag\u00e8s H.(2022).AnnotationForge: Tools for building SQLite\u2010based annotation data packages. (Version Bioconductor version: Release (3.15)) [Computer software].10.18129\/B9.bioc.AnnotationForge"},{"key":"e_1_2_8_9_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.eja.2011.06.007"},{"key":"e_1_2_8_10_1","doi-asserted-by":"publisher","DOI":"10.1146\/annurev-phyto-082718-100318"},{"key":"e_1_2_8_11_1","doi-asserted-by":"publisher","DOI":"10.1007\/s00122-021-03825-y"},{"key":"e_1_2_8_12_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.mito.2014.03.006"},{"key":"e_1_2_8_13_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.agsy.2018.01.025"},{"key":"e_1_2_8_14_1","doi-asserted-by":"crossref","unstructured":"Darino M. Jaiswal N. Darma R. Kroll E. Urban M. Xiang Y. Srivastava M. Kim H.\u2010S. Myers A. Scofield S. R. Innes R. W. Hammond\u2010Kosack K. E. &Helm M.(2024).The Fusarium graminearum effector protease FgTPP1 suppresses immune responses and facilitates Fusarium Head Blight Disease (p. 2024.08.30.610543). bioRxiv.https:\/\/doi.org\/10.1101\/2024.08.30.610543","DOI":"10.1101\/2024.08.30.610543"},{"key":"e_1_2_8_15_1","doi-asserted-by":"publisher","DOI":"10.1038\/nplants.2015.74"},{"key":"e_1_2_8_16_1","doi-asserted-by":"publisher","DOI":"10.1094\/PHYTO-01-13-0024-R"},{"key":"e_1_2_8_17_1","doi-asserted-by":"publisher","DOI":"10.1038\/nprot.2009.97"},{"key":"e_1_2_8_18_1","doi-asserted-by":"crossref","unstructured":"Engelhardt S. Stam R. &H\u00fcckelhoven R.(2018).Good Riddance? Breaking Disease Susceptibility in the Era of New Breeding Technologies. Agronomy 8(7) Article 7.https:\/\/doi.org\/10.3390\/agronomy8070114","DOI":"10.3390\/agronomy8070114"},{"key":"e_1_2_8_19_1","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2019.02857"},{"key":"e_1_2_8_20_1","doi-asserted-by":"publisher","DOI":"10.3389\/fpls.2020.00731"},{"key":"e_1_2_8_21_1","doi-asserted-by":"publisher","DOI":"10.1111\/pce.13549"},{"key":"e_1_2_8_22_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.pbi.2021.102054"},{"key":"e_1_2_8_23_1","doi-asserted-by":"publisher","DOI":"10.1186\/s13007-018-0288-5"},{"key":"e_1_2_8_24_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0235482"},{"key":"e_1_2_8_25_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.copbio.2021.05.005"},{"key":"e_1_2_8_26_1","doi-asserted-by":"publisher","DOI":"10.1139\/gen-2015-0088"},{"key":"e_1_2_8_27_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.cj.2020.06.012"},{"key":"e_1_2_8_28_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0164996"},{"key":"e_1_2_8_29_1","doi-asserted-by":"publisher","DOI":"10.1093\/treephys\/tpx174"},{"key":"e_1_2_8_30_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1364-3703.2004.00252.x"},{"key":"e_1_2_8_31_1","doi-asserted-by":"publisher","DOI":"10.1093\/ee\/nvv028"},{"key":"e_1_2_8_32_1","doi-asserted-by":"publisher","DOI":"10.1093\/jxb\/eraa226"},{"key":"e_1_2_8_33_1","doi-asserted-by":"publisher","DOI":"10.1104\/pp.109.147702"},{"key":"e_1_2_8_34_1","doi-asserted-by":"publisher","DOI":"10.1016\/S2095-3119(17)61680-0"},{"key":"e_1_2_8_35_1","doi-asserted-by":"publisher","DOI":"10.1104\/pp.16.00166"},{"key":"e_1_2_8_36_1","doi-asserted-by":"publisher","DOI":"10.1093\/plphys\/kiae538"},{"key":"e_1_2_8_37_1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/28.1.27"},{"key":"e_1_2_8_38_1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkj102"},{"key":"e_1_2_8_39_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.jmb.2015.11.006"},{"key":"e_1_2_8_40_1","unstructured":"Kassambara A.(2022).rstatix: Pipe\u2010Friendly Framework for Basic Statistical Tests. (Version R Package Version 0.7.1) [Computer software].https:\/\/github.com\/kassambara\/rstatix"},{"key":"e_1_2_8_41_1","unstructured":"Kolde R.(2019).pheatmap: Pretty heatmaps(Version R Package Version 1.0.12) [Computer software].https:\/\/github.com\/raivokolde\/pheatmap"},{"key":"e_1_2_8_42_1","doi-asserted-by":"crossref","unstructured":"Kretschmer M. Damoo D. Djamei A. &Kronstad J.(2020).Chloroplasts and Plant Immunity: Where Are the Fungal Effectors?Pathogens 9(1) Article 1.https:\/\/doi.org\/10.3390\/pathogens9010019","DOI":"10.3390\/pathogens9010019"},{"key":"e_1_2_8_43_1","doi-asserted-by":"publisher","DOI":"10.1186\/s13007-020-00611-7"},{"key":"e_1_2_8_44_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.tplants.2013.05.005"},{"key":"e_1_2_8_45_1","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2229-11-41"},{"key":"e_1_2_8_46_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.plaphy.2022.03.032"},{"key":"e_1_2_8_47_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41588-019-0426-7"},{"key":"e_1_2_8_48_1","doi-asserted-by":"publisher","DOI":"10.1111\/nph.17076"},{"key":"e_1_2_8_49_1","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-014-0550-8"},{"key":"e_1_2_8_50_1","doi-asserted-by":"crossref","unstructured":"Lu Y. &Yao J.(2018).Chloroplasts at the Crossroad of Photosynthesis Pathogen Infection and Plant Defense. International Journal of Molecular Sciences 19(12) Article 12.https:\/\/doi.org\/10.3390\/ijms19123900","DOI":"10.3390\/ijms19123900"},{"key":"e_1_2_8_51_1","doi-asserted-by":"publisher","DOI":"10.1094\/PD-90-1545"},{"key":"e_1_2_8_52_1","doi-asserted-by":"publisher","DOI":"10.1007\/s11120-009-9507-2"},{"key":"e_1_2_8_53_1","doi-asserted-by":"publisher","DOI":"10.1094\/PDIS-03-12-0291-FE"},{"key":"e_1_2_8_54_1","doi-asserted-by":"crossref","unstructured":"Medina\u2010Puche L. Tan H. Dogra V. Wu M. Rosas\u2010Diaz T. Wang L. Ding X. Zhang D. Fu X. Kim C. &Lozano\u2010Duran R.(2020).A Defense Pathway Linking Plasma Membrane and Chloroplasts and Co\u2010opted by Pathogens. Cell 182(5) 1109\u20101124.e25.https:\/\/doi.org\/10.1016\/j.cell.2020.07.020","DOI":"10.1016\/j.cell.2020.07.020"},{"key":"e_1_2_8_55_1","doi-asserted-by":"crossref","unstructured":"Mesterhazy A.(2020).Updating the Breeding Philosophy of Wheat to Fusarium Head Blight (FHB): Resistance Components QTL Identification and Phenotyping\u2014A Review. Plants 9(12) Article 12.https:\/\/doi.org\/10.3390\/plants9121702","DOI":"10.3390\/plants9121702"},{"key":"e_1_2_8_56_1","doi-asserted-by":"publisher","DOI":"10.1007\/s00357-014-9161-z"},{"key":"e_1_2_8_57_1","doi-asserted-by":"publisher","DOI":"10.1094\/MPMI-04-15-0096-R"},{"key":"e_1_2_8_58_1","doi-asserted-by":"publisher","DOI":"10.1007\/s10681-015-1425-0"},{"key":"e_1_2_8_59_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-3059.1995.tb02773.x"},{"key":"e_1_2_8_60_1","doi-asserted-by":"publisher","DOI":"10.1007\/s11032-009-9323-6"},{"key":"e_1_2_8_61_1","doi-asserted-by":"publisher","DOI":"10.1080\/07352680600563876"},{"key":"e_1_2_8_62_1","volume-title":"R: a language and environment for statistical computing [Computer software]","author":"R Core Team","year":"2021"},{"key":"e_1_2_8_63_1","doi-asserted-by":"publisher","DOI":"10.1093\/jxb\/eri153"},{"key":"e_1_2_8_64_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp616"},{"key":"e_1_2_8_65_1","doi-asserted-by":"crossref","unstructured":"Rocher F. Alouane T. Philippe G. Martin M.\u2010L. Label P. Langin T. &Bonhomme L.(2022).Fusarium graminearum Infection Strategy in Wheat Involves a Highly Conserved Genetic Program That Controls the Expression of a Core Effectome. International Journal of Molecular Sciences 23(3) Article 3.https:\/\/doi.org\/10.3390\/ijms23031914","DOI":"10.3390\/ijms23031914"},{"key":"e_1_2_8_66_1","doi-asserted-by":"publisher","DOI":"10.1186\/s12915-024-01852-x"},{"key":"e_1_2_8_67_1","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.2089"},{"key":"e_1_2_8_68_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1438-8677.2012.00723.x"},{"key":"e_1_2_8_69_1","doi-asserted-by":"publisher","DOI":"10.1007\/s40858-017-0127-7"},{"key":"e_1_2_8_70_1","doi-asserted-by":"publisher","DOI":"10.1111\/jipb.12992"},{"key":"e_1_2_8_71_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41588-019-0425-8"},{"key":"e_1_2_8_72_1","doi-asserted-by":"publisher","DOI":"10.1094\/PHYTO-04-14-0097-R"},{"key":"e_1_2_8_73_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.bbrc.2021.01.019"},{"key":"e_1_2_8_74_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.jplph.2010.11.004"},{"key":"e_1_2_8_75_1","doi-asserted-by":"crossref","unstructured":"vanSchie C. C. N. &Takken F. L. W.(2014).Susceptibility Genes 101: How to Be a Good Host. Annual Review of Phytopathology 52(Volume 52 2014) 551\u2013581.https:\/\/doi.org\/10.1146\/annurev-phyto-102313-045854","DOI":"10.1146\/annurev-phyto-102313-045854"},{"key":"e_1_2_8_76_1","doi-asserted-by":"publisher","DOI":"10.3389\/fpls.2019.00727"},{"key":"e_1_2_8_77_1","doi-asserted-by":"publisher","DOI":"10.1105\/tpc.003509"},{"key":"e_1_2_8_78_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.tplants.2022.04.007"},{"key":"e_1_2_8_79_1","doi-asserted-by":"publisher","DOI":"10.3920\/WMJ2019.2518"},{"key":"e_1_2_8_80_1","doi-asserted-by":"publisher","DOI":"10.1126\/sciadv.abb7719"},{"key":"e_1_2_8_81_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-019-13487-6"},{"key":"e_1_2_8_82_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.tibtech.2018.04.005"},{"key":"e_1_2_8_83_1","doi-asserted-by":"publisher","DOI":"10.1186\/s12915-024-02007-8"},{"key":"e_1_2_8_84_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.cj.2020.10.006"}],"container-title":["Physiologia Plantarum"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1111\/ppl.70150","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,11,7]],"date-time":"2025-11-07T10:16:29Z","timestamp":1762510589000},"score":1,"resource":{"primary":{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/ppl.70150"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,3]]},"references-count":83,"journal-issue":{"issue":"2","published-print":{"date-parts":[[2025,3]]}},"alternative-id":["10.1111\/ppl.70150"],"URL":"https:\/\/doi.org\/10.1111\/ppl.70150","archive":["Portico"],"relation":{},"ISSN":["0031-9317","1399-3054"],"issn-type":[{"value":"0031-9317","type":"print"},{"value":"1399-3054","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025,3]]},"assertion":[{"value":"2024-06-12","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2025-02-20","order":2,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2025-03-16","order":3,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}],"article-number":"e70150"}}