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Genome sequencing of each fungal strain was used to supplement the investigation. By disproving a close genetic link between infecting strains of mucormycosis, we were able to conclude the outbreak investigation. Genome sequencing is a novel tool that can be used in addition to traditional epidemiologic investigations to help determine linkage of patients during outbreak investigations.<\/jats:p>","DOI":"10.1111\/tid.13163","type":"journal-article","created":{"date-parts":[[2019,8,31]],"date-time":"2019-08-31T16:48:07Z","timestamp":1567270087000},"update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":10,"title":["The use of genome sequencing to investigate an outbreak of hospital\u2010acquired mucormycosis in transplant patients"],"prefix":"10.1111","volume":"21","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-9781-9295","authenticated-orcid":false,"given":"Caitlyn","family":"Marek","sequence":"first","affiliation":[{"name":"University of Alberta Edmonton AB Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Matthew A.","family":"Croxen","sequence":"additional","affiliation":[{"name":"University of Alberta Edmonton AB Canada"},{"name":"Public Health Laboratory Edmonton AB Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tanis C.","family":"Dingle","sequence":"additional","affiliation":[{"name":"University of Alberta Edmonton AB Canada"},{"name":"Public Health Laboratory Edmonton AB Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Amrita","family":"Bharat","sequence":"additional","affiliation":[{"name":"National Microbiology Laboratory Public Health Agency of Canada Winnipeg MB Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ilan S.","family":"Schwartz","sequence":"additional","affiliation":[{"name":"University of Alberta Edmonton AB Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Rhoda","family":"Wiens","sequence":"additional","affiliation":[{"name":"Alberta Health Services University of Alberta Edmonton AB Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Stephanie","family":"Smith","sequence":"additional","affiliation":[{"name":"University of Alberta Edmonton AB Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2019,9,13]]},"reference":[{"key":"e_1_2_4_2_1","doi-asserted-by":"publisher","DOI":"10.1093\/cid\/cir866"},{"key":"e_1_2_4_3_1","doi-asserted-by":"publisher","DOI":"10.1128\/CMR.13.2.236"},{"key":"e_1_2_4_4_1","doi-asserted-by":"publisher","DOI":"10.1093\/cid\/cir867"},{"key":"e_1_2_4_5_1","doi-asserted-by":"publisher","DOI":"10.1097\/INF.0000000000000261"},{"key":"e_1_2_4_6_1","doi-asserted-by":"publisher","DOI":"10.15585\/mmwr.mm6518a5"},{"key":"e_1_2_4_7_1","doi-asserted-by":"publisher","DOI":"10.1111\/eci.12467"},{"key":"e_1_2_4_8_1","unstructured":"SeemannT. 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