{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,16]],"date-time":"2026-10-16T07:22:18Z","timestamp":1792135338522,"version":"4.4.0"},"reference-count":148,"publisher":"Wiley","issue":"4","license":[{"start":{"date-parts":[[2026,8,17]],"date-time":"2026-08-17T00:00:00Z","timestamp":1786924800000},"content-version":"vor","delay-in-days":16,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2026,8,1]],"date-time":"2026-08-01T00:00:00Z","timestamp":1785542400000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/doi.wiley.com\/10.1002\/tdm_license_1.1"}],"content-domain":{"domain":["onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["The Plant Journal"],"published-print":{"date-parts":[[2026,8]]},"abstract":"<jats:title>SUMMARY<\/jats:title>\n                  <jats:p>\n                    <jats:italic>Dioscorea alata<\/jats:italic>\n                    L., the most widely cultivated yam species, exhibits dioecy (XY system) and a strong male\u2010biased sex ratio. These two major constraints limit parental combinations and hinder breeding progress. To get insight into the sex chromosome structure and evolution in\n                    <jats:italic>D. alata<\/jats:italic>\n                    , we present a haplotype\u2010resolved, near\u2010complete genome assembly of the male cultivar \u201cKabusa,\u201d spanning 958\u2009Mb across 40 chromosomes. DalaChr6A is identified as the Y chromosome which exhibits early signs of heteromorphism, including a slight reduction in size (\u223c400 Kb difference) and a potential centromere shift relative to the X chromosome. Our findings also reveal a sex chromosome turnover between\n                    <jats:italic>D. alata<\/jats:italic>\n                    and\n                    <jats:italic>D. rotundata<\/jats:italic>\n                    . The sex chromosomes of\n                    <jats:italic>D. alata<\/jats:italic>\n                    are evolutionarily young (approximately 4.32 million years ago) and emerged after the divergence from the\n                    <jats:italic>D. rotundata<\/jats:italic>\n                    lineage. The sex\u2010determining region (SDR) is refined to approximately 7.6\u2009Mb, representing approximately 44% of the Y chromosome. It contains several inversions and a divergence gradient was observed across these inversions. INV4 identified as the oldest pericentric inversion likely marks the early step in\n                    <jats:italic>D. alata<\/jats:italic>\n                    SDR evolution. Despite structural divergence, both X and Y chromosomes remain transcriptionally active. Among the 231 genes annotated in the SDR, 97 are sex\u2010biased and enriched in functions associated with floral organ formation and hormonal signaling pathways. This study enhances our understanding of sex chromosome evolution and sex determination in dioecious plants. It provides a gold\u2010standard reference genome for the\n                    <jats:italic>Dioscorea<\/jats:italic>\n                    genus and lays the foundation for accelerated breeding and genetic improvement in yam.\n                  <\/jats:p>","DOI":"10.1111\/tpj.71091","type":"journal-article","created":{"date-parts":[[2026,8,17]],"date-time":"2026-08-17T13:06:44Z","timestamp":1786972004000},"update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":2,"title":["Haplotype\u2010resolved genome assembly of a male\n                    <i>Dioscorea alata<\/i>\n                    cultivar reveals the structure and evolution of young sex chromosomes"],"prefix":"10.1111","volume":"127","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-4894-6279","authenticated-orcid":false,"given":"Komivi","family":"Dossa","sequence":"first","affiliation":[{"name":"CIRAD UMR AGAP Institut  97170 Petit Bourg Guadeloupe France"},{"name":"UMR AGAP 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