{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,2]],"date-time":"2026-10-02T09:08:53Z","timestamp":1790932133134,"version":"4.1.0"},"reference-count":51,"publisher":"Wiley","issue":"1","license":[{"start":{"date-parts":[[2017,11,28]],"date-time":"2017-11-28T00:00:00Z","timestamp":1511827200000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/onlinelibrary.wiley.com\/termsAndConditions#vor"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Zoonoses and Public Health"],"published-print":{"date-parts":[[2018,2]]},"abstract":"<jats:title>Summary<\/jats:title><jats:p>The sources and modes of transmission of non\u2010typhoidal <jats:italic>Salmonella<\/jats:italic> particularly zoonotic transmission are poorly understood in Africa. This study compared phenotypic and genotypic characteristics of Salmonellae isolated from cattle and humans. Faecal samples of diarrhoeic patients (<jats:italic>n<\/jats:italic>\u00a0=\u00a0234), and a healthy population (<jats:italic>n<\/jats:italic>\u00a0=\u00a0160), beef cattle at slaughter (<jats:italic>n<\/jats:italic>\u00a0=\u00a0250), farms (<jats:italic>n<\/jats:italic>\u00a0=\u00a072) and market (<jats:italic>n<\/jats:italic>\u00a0=\u00a0100) were cultured for salmonellae and serotyping and antimicrobial susceptibility were determined. Whole\u2010genome sequence typing (<jats:styled-content style=\"fixed-case\">WGST<\/jats:styled-content>) of selected isolates and bioinformatic analysis were used to identify the multilocus sequence type (<jats:styled-content style=\"fixed-case\">MLST<\/jats:styled-content>), plasmid replicons, antimicrobial resistance genes and genetic relatedness by single nucleotide polymorphism (<jats:styled-content style=\"fixed-case\">SNP<\/jats:styled-content>) analysis. The <jats:italic>Salmonella<\/jats:italic> isolates, diarrhoeic patients (<jats:italic>n<\/jats:italic>\u00a0=\u00a017), healthy population (<jats:italic>n<\/jats:italic>\u00a0=\u00a013), cattle (abattoir, <jats:italic>n<\/jats:italic>\u00a0=\u00a067; farms, <jats:italic>n<\/jats:italic>\u00a0=\u00a010; market <jats:italic>n<\/jats:italic>\u00a0=\u00a05), revealed 49 serovars; some serovars were common to humans and cattle. Rare serovars were prevalent: Colindale (cattle and humans); Rubislaw and Bredeney (humans); and Dublin, Give, Eastbourne, Hadar, Marseille, Sundsvall, Bergen, Ekotedo, Carno and Ealing (cattle). The sequence types (<jats:styled-content style=\"fixed-case\">ST<\/jats:styled-content>) include <jats:styled-content style=\"fixed-case\">ST<\/jats:styled-content> 584, <jats:styled-content style=\"fixed-case\">ST<\/jats:styled-content> 198, <jats:styled-content style=\"fixed-case\">ST<\/jats:styled-content> 562 and <jats:styled-content style=\"fixed-case\">ST<\/jats:styled-content> 512 for <jats:italic>S<\/jats:italic>. Colindale, <jats:italic>S<\/jats:italic>. Kentucky <jats:italic>S<\/jats:italic>. Rubislaw and <jats:italic>S<\/jats:italic>. Urbana, respectively. Clonal cluster shared by cattle and human <jats:styled-content style=\"fixed-case\">WGST<\/jats:styled-content> isolates was not found. Antimicrobial resistance rates were generally low and towards only chloramphenicol, ampicillin, gentamicin, ciprofloxacin, tetracycline and streptomycin, range 2.7% (chloramphenicol) to 8.9% (streptomycin). Multiply resistant isolates included serovars Kentucky, 4,5,12:i:\u2010 and Typhimurium. The study presents a baseline description of the prevalence, serotypes, antimicrobial resistance phenotypes and genetic relatedness of <jats:italic>Salmonella<\/jats:italic> isolated from healthy and diarrhoeic humans, and cattle at harvest, on farm and at market. Cattle are a reservoir of diverse salmonellae with shared serovars with humans, but <jats:styled-content style=\"fixed-case\">WGST<\/jats:styled-content> does not support zoonotic transmission. Further study with larger samples is recommended to determine whether epidemiological link exists between cattle and humans.<\/jats:p>","DOI":"10.1111\/zph.12427","type":"journal-article","created":{"date-parts":[[2017,11,29]],"date-time":"2017-11-29T17:23:17Z","timestamp":1511976197000},"source":"Crossref","is-referenced-by-count":8,"title":["Phenotypic and genotypic comparison of salmonellae from diarrhoeic and healthy humans and cattle, Nigeria"],"prefix":"10.1111","volume":"65","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-8580-8591","authenticated-orcid":false,"given":"K.","family":"Fashae","sequence":"first","affiliation":[{"name":"Department of Microbiology University of Ibadan  Ibadan Nigeria"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"P.","family":"Leekitcharoenphon","sequence":"additional","affiliation":[{"name":"WHO Collaborating Center for Antimicrobial Resistance in Food borne Pathogens and European Union Reference Laboratory for Antimicrobial Resistance National Food Institute Technical University of Denmark  Kgs. Lyngby Denmark"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"R. S.","family":"Hendriksen","sequence":"additional","affiliation":[{"name":"WHO Collaborating Center for Antimicrobial Resistance in Food borne Pathogens and European Union Reference Laboratory for Antimicrobial Resistance National Food Institute Technical University of Denmark  Kgs. Lyngby Denmark"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2017,11,28]]},"reference":[{"key":"e_1_2_8_2_1","doi-asserted-by":"crossref","first-page":"36","DOI":"10.1186\/1471-2431-13-36","article-title":"Bacterial and viral etiology of childhood diarrhea in Ouagadougou, Burkina Faso","volume":"13","author":"Bonkoungou I. J. O.","year":"2013","journal-title":"BMC Pediatrics"},{"key":"e_1_2_8_3_1","doi-asserted-by":"publisher","DOI":"10.1128\/AAC.02412-14"},{"key":"e_1_2_8_4_1","volume-title":"Performance standards for antimicrobial disk susceptibility tests","author":"Clinical and Laboratory Standards Institute","year":"2015"},{"key":"e_1_2_8_5_1","volume-title":"Performance standards for antimicrobial disk susceptibility testing","author":"Clinical and Laboratory Standards Institute","year":"2015"},{"key":"e_1_2_8_6_1","doi-asserted-by":"publisher","DOI":"10.1093\/infdis\/106.3.270"},{"key":"e_1_2_8_7_1","doi-asserted-by":"publisher","DOI":"10.1086\/599374"},{"key":"e_1_2_8_8_1","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.68.1.181-186.2002"},{"key":"e_1_2_8_9_1","first-page":"28","volume-title":"Manual for the identification of medical bacteria","author":"Cowan S. T.","year":"1974"},{"key":"e_1_2_8_10_1","doi-asserted-by":"publisher","DOI":"10.1016\/S0140-6736(75)92446-0"},{"key":"e_1_2_8_11_1","doi-asserted-by":"publisher","DOI":"10.1128\/CMR.00002-15"},{"key":"e_1_2_8_12_1","doi-asserted-by":"publisher","DOI":"10.3201\/eid1812.110831"},{"key":"e_1_2_8_13_1","doi-asserted-by":"publisher","DOI":"10.3390\/ijerph120403535"},{"key":"e_1_2_8_14_1","doi-asserted-by":"publisher","DOI":"10.1146\/annurev-food-041715-033259"},{"key":"e_1_2_8_15_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pntd.0001148"},{"key":"e_1_2_8_16_1","doi-asserted-by":"publisher","DOI":"10.1007\/s12223-013-0270-6"},{"issue":"8","key":"e_1_2_8_17_1","doi-asserted-by":"crossref","first-page":"484","DOI":"10.3855\/jidc.909","article-title":"Antimicrobial susceptibility and serovars of Salmonella from chickens and humans in Ibadan, Nigeria","volume":"4","author":"Fashae K.","year":"2010","journal-title":"Journal Infection in Developing Countries"},{"key":"e_1_2_8_18_1","doi-asserted-by":"publisher","DOI":"10.1179\/joc.2004.16.4.337"},{"key":"e_1_2_8_19_1","volume-title":"Antigenic formulae of the Salmonella serovars","author":"Grimont P. A. D.","year":"2007"},{"key":"e_1_2_8_20_1","doi-asserted-by":"publisher","DOI":"10.1111\/1469-0691.12339"},{"key":"e_1_2_8_21_1","doi-asserted-by":"publisher","DOI":"10.1128\/JCM.02026-14"},{"key":"e_1_2_8_22_1","first-page":"780","article-title":"Outbreak of Salmonella give in the province of Quebec","volume":"38","author":"Higgins R.","year":"1997","journal-title":"Canadian Veterinary Journal"},{"key":"e_1_2_8_23_1","doi-asserted-by":"publisher","DOI":"10.3855\/jidc.4185"},{"key":"e_1_2_8_24_1","doi-asserted-by":"publisher","DOI":"10.1093\/cid\/civ789"},{"key":"e_1_2_8_25_1","doi-asserted-by":"publisher","DOI":"10.3201\/eid1908.121511"},{"key":"e_1_2_8_26_1","doi-asserted-by":"publisher","DOI":"10.1093\/cid\/civ713"},{"issue":"5","key":"e_1_2_8_27_1","first-page":"691","article-title":"Molecular typing of Salmonella enterica serotype\u00a0Worthington\u00a0isolates from infantile diarrhoea","volume":"123","author":"Kapoor L.","year":"2006","journal-title":"Indian Journal Medical Research"},{"key":"e_1_2_8_28_1","doi-asserted-by":"publisher","DOI":"10.1099\/jmm.0.46375-0"},{"issue":"1","key":"e_1_2_8_29_1","first-page":"9","article-title":"Exotic pets as a potential source of\u00a0Salmonella","volume":"59","author":"Kocianov\u00e1 H.","year":"2010","journal-title":"Epidemiologie Mikrobiologie Imunologie"},{"key":"e_1_2_8_30_1","doi-asserted-by":"publisher","DOI":"10.1089\/mdr.2009.0035"},{"key":"e_1_2_8_31_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0120275"},{"key":"e_1_2_8_32_1","doi-asserted-by":"publisher","DOI":"10.1128\/JCM.06094-11"},{"key":"e_1_2_8_33_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0156212"},{"key":"e_1_2_8_34_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp324"},{"key":"e_1_2_8_35_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp352"},{"key":"e_1_2_8_36_1","doi-asserted-by":"publisher","DOI":"10.1086\/650733"},{"key":"e_1_2_8_37_1","doi-asserted-by":"publisher","DOI":"10.1620\/tjem.203.129"},{"key":"e_1_2_8_38_1","doi-asserted-by":"publisher","DOI":"10.1016\/S0163-4453(03)00040-9"},{"key":"e_1_2_8_39_1","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2431-11-19"},{"key":"e_1_2_8_40_1","doi-asserted-by":"publisher","DOI":"10.1046\/j.1442-200X.2002.01582.x"},{"key":"e_1_2_8_41_1","doi-asserted-by":"publisher","DOI":"10.1093\/cid\/civ745"},{"issue":"2","key":"e_1_2_8_42_1","doi-asserted-by":"crossref","first-page":"252","DOI":"10.3855\/jidc.4377","article-title":"New genomics studies to understand the link between nontyphoidal Salmonella bacteremia and gastroenteritis in Africa","volume":"8","author":"Onsari R. S.","year":"2014","journal-title":"Journal Infection in Developing Countries"},{"key":"e_1_2_8_43_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pmed.1001256"},{"key":"e_1_2_8_44_1","doi-asserted-by":"publisher","DOI":"10.1089\/mdr.2012.0151"},{"key":"e_1_2_8_45_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0009490"},{"key":"e_1_2_8_46_1","doi-asserted-by":"publisher","DOI":"10.1111\/jam.12304"},{"key":"e_1_2_8_47_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.vetmic.2014.02.013"},{"key":"e_1_2_8_48_1","doi-asserted-by":"publisher","DOI":"10.1016\/S0140-6736(87)91384-5"},{"key":"e_1_2_8_49_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.mcp.2016.04.001"},{"key":"e_1_2_8_50_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.vetmic.2013.05.010"},{"key":"e_1_2_8_51_1","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2334-5-7"},{"key":"e_1_2_8_52_1","doi-asserted-by":"publisher","DOI":"10.1093\/jac\/dks261"}],"container-title":["Zoonoses and Public Health"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.wiley.com\/onlinelibrary\/tdm\/v1\/articles\/10.1111%2Fzph.12427","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1111\/zph.12427","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,9,17]],"date-time":"2023-09-17T21:29:16Z","timestamp":1694986156000},"score":1,"resource":{"primary":{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/zph.12427"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017,11,28]]},"references-count":51,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2018,2]]}},"alternative-id":["10.1111\/zph.12427"],"URL":"https:\/\/doi.org\/10.1111\/zph.12427","archive":["Portico"],"relation":{},"ISSN":["1863-1959","1863-2378"],"issn-type":[{"value":"1863-1959","type":"print"},{"value":"1863-2378","type":"electronic"}],"subject":[],"published":{"date-parts":[[2017,11,28]]}}}