{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,23]],"date-time":"2026-10-23T11:42:40Z","timestamp":1792755760725,"version":"4.5.0"},"reference-count":66,"publisher":"American Association for the Advancement of Science (AAAS)","issue":"2","content-domain":{"domain":["www.science.org"],"crossmark-restriction":true},"short-container-title":["Sci. Adv."],"published-print":{"date-parts":[[2025,1,10]]},"abstract":"<jats:p>\n            \u03b3-Aminobutyric acid type A (GABA\n            <jats:sub>A<\/jats:sub>\n            ) receptors are ligand-gated ion channels in the central nervous system with largely inhibitory function. Despite being a target for drugs including general anesthetics and benzodiazepines, experimental structures have yet to capture an open state of classical synaptic \u03b11\u03b22\u03b32 GABA\n            <jats:sub>A<\/jats:sub>\n            receptors. Here, we use a goal-oriented adaptive sampling strategy in molecular dynamics simulations followed by Markov state modeling to capture an energetically stable putative open state of the receptor. The model conducts chloride ions with comparable conductance as in electrophysiology measurements. Relative to experimental structures, our open model is relatively expanded at both the cytoplasmic (\u22122\u2032) and central (9\u2032) gates, coordinated with distinctive rearrangements at the transmembrane \u03b1\u03b2 subunit interface. Consistent with previous experiments, targeted substitutions disrupting interactions at this interface slowed the open-to-desensitized transition rate. This work demonstrates the capacity of advanced simulation techniques to investigate a computationally and experimentally plausible functionally critical of a complex membrane protein yet to be resolved by experimental methods.\n          <\/jats:p>","DOI":"10.1126\/sciadv.adq3788","type":"journal-article","created":{"date-parts":[[2025,1,8]],"date-time":"2025-01-08T18:59:23Z","timestamp":1736362763000},"update-policy":"https:\/\/doi.org\/10.34133\/aaas_crossmark","source":"Crossref","is-referenced-by-count":11,"title":["Adaptive sampling\u2013based structural prediction reveals opening of a GABA\n            <sub>A<\/sub>\n            receptor through the \u03b1\u03b2 interface"],"prefix":"10.1126","volume":"11","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-3542-333X","authenticated-orcid":true,"given":"Nandan","family":"Haloi","sequence":"first","affiliation":[{"name":"SciLifeLab, Department of Applied Physics, KTH Royal Institute of Technology, Tomtebod\u00e4vagen 23, Solna, 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Sweden."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-2734-2794","authenticated-orcid":true,"given":"Erik","family":"Lindahl","sequence":"additional","affiliation":[{"name":"SciLifeLab, Department of Applied Physics, KTH Royal Institute of Technology, Tomtebod\u00e4vagen 23, Solna, 17165 Stockholm, Sweden."},{"name":"SciLifeLab, Department of Biochemistry and Biophysics, Stockholm University, Tomtebodav\u00e4gen 23, Solna, 17165 Stockholm, 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