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This polymorphism has been hypothesized to be governed by negative frequency-dependent selection whereby the rarer female morph is protected against harassment by males or from mobbing by parasitized host species. Here, we show that female plumage dichromatism maps to the female-restricted genome. We further demonstrate that, consistent with balancing selection, ancestry of the rufous phenotype is shared with the likewise female dichromatic sister species, the oriental cuckoo (\n            <jats:italic>Cuculus optatus<\/jats:italic>\n            ). This study shows that sex-specific polymorphism in trait variation can be resolved by genetic variation residing on a sex-limited chromosome and be maintained across species boundaries.\n          <\/jats:p>","DOI":"10.1126\/sciadv.adl5255","type":"journal-article","created":{"date-parts":[[2024,4,24]],"date-time":"2024-04-24T18:00:03Z","timestamp":1713981603000},"update-policy":"https:\/\/doi.org\/10.34133\/aaas_crossmark","source":"Crossref","is-referenced-by-count":15,"title":["Evolution and genetic architecture of sex-limited polymorphism in cuckoos"],"prefix":"10.1126","volume":"10","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-5077-4096","authenticated-orcid":true,"given":"Justin","family":"Merondun","sequence":"first","affiliation":[{"name":"Division of Evolutionary Biology, LMU Munich, Planegg-Martinsried, Germany."},{"name":"Department of Ornithology, Max Planck Institute for Biological Intelligence, Seewiesen, 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