{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,30]],"date-time":"2026-07-30T13:58:33Z","timestamp":1785419913722,"version":"3.56.0"},"reference-count":54,"publisher":"American Society for Microbiology","issue":"7","license":[{"start":{"date-parts":[[2026,7,1]],"date-time":"2026-07-01T00:00:00Z","timestamp":1782864000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2026,7,1]],"date-time":"2026-07-01T00:00:00Z","timestamp":1782864000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.asm.org\/non-commercial-tdm-license"}],"content-domain":{"domain":["journals.asm.org"],"crossmark-restriction":true},"short-container-title":["Antimicrob Agents Chemother"],"published-print":{"date-parts":[[2026,7,1]]},"abstract":"<jats:title>ABSTRACT<\/jats:title>\n                  <jats:sec>\n                    <jats:title\/>\n                    <jats:p>\n                      Next-generation sequencing techniques have revolutionized the epidemiology and understanding of\n                      <jats:italic toggle=\"yes\">Campylobacter<\/jats:italic>\n                      spp. infections. In this study, we present the results of a next-generation sequencing (NGS) analysis conducted in 2024 on 2,360\n                      <jats:italic toggle=\"yes\">Campylobacte<\/jats:italic>\n                      r spp. strains isolated in France, including 1,959\n                      <jats:italic toggle=\"yes\">Campylobacter jejuni,<\/jats:italic>\n                      358\n                      <jats:italic toggle=\"yes\">Campylobacter coli<\/jats:italic>\n                      , and 43\n                      <jats:italic toggle=\"yes\">Campylobacter fetus<\/jats:italic>\n                      strains. We describe the diversity of circulating strains and provide an overview of the main mechanisms of antibiotic resistance. We identified a variety of resistance mechanisms, particularly for resistance to group A penicillins. Notably, we identified a novel promoter upstream of the gene encoding a beta-lactamase. Using source attribution markers for\n                      <jats:italic toggle=\"yes\">C. jejuni<\/jats:italic>\n                      and\n                      <jats:italic toggle=\"yes\">C. coli,<\/jats:italic>\n                      we identified poultry as the main vector for infections by these two species. However, ruminant meat accounts for a significant proportion of\n                      <jats:italic toggle=\"yes\">C. jejuni<\/jats:italic>\n                      infections in France. This study demonstrates how a sequencing strategy can generate large-scale and high-resolution data for understanding\n                      <jats:italic toggle=\"yes\">Campylobacter<\/jats:italic>\n                      spp. infections.\n                    <\/jats:p>\n                  <\/jats:sec>","DOI":"10.1128\/aac.00193-26","type":"journal-article","created":{"date-parts":[[2026,5,29]],"date-time":"2026-05-29T06:46:42Z","timestamp":1780037202000},"update-policy":"https:\/\/doi.org\/10.1128\/asmj-crossmark-policy-page","source":"Crossref","is-referenced-by-count":0,"title":["Contributions of whole-genome sequencing to the epidemiological monitoring of\n                    <i>Campylobacter<\/i>\n                    spp. in France"],"prefix":"10.1128","volume":"70","author":[{"ORCID":"https:\/\/orcid.org\/0009-0008-7312-6516","authenticated-orcid":true,"given":"Quentin","family":"Jehanne","sequence":"first","affiliation":[{"name":"National Reference Centre for Campylobacters & Helicobacters","place":["Bordeaux, France"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Johanna","family":"Aptel","sequence":"additional","affiliation":[{"name":"National Reference Centre for Campylobacters & Helicobacters","place":["Bordeaux, France"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Astrid","family":"Ducournau","sequence":"additional","affiliation":[{"name":"National Reference Centre for Campylobacters & Helicobacters","place":["Bordeaux, France"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lucie","family":"B\u00e9n\u00e9jat","sequence":"additional","affiliation":[{"name":"National Reference Centre for Campylobacters & Helicobacters","place":["Bordeaux, France"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Moeava","family":"Martin","sequence":"additional","affiliation":[{"name":"National Reference Centre for Campylobacters & Helicobacters","place":["Bordeaux, France"]},{"name":"Inserm, UMR 1312, BRIC, BoRdeaux Institute of onCology, University of Bordeaux","place":["Bordeaux, France"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9817-5006","authenticated-orcid":true,"given":"Christophe","family":"Rodriguez","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/04m61mj84","id-type":"ROR","asserted-by":"publisher"}],"name":"Plateforme GenoBioMICS, CHU Henri Mondor","place":["Cr\u00e9teil, France"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6077-1825","authenticated-orcid":true,"given":"Philippe","family":"Lehours","sequence":"additional","affiliation":[{"name":"National Reference Centre for Campylobacters & Helicobacters","place":["Bordeaux, France"]},{"name":"Inserm, UMR 1312, BRIC, BoRdeaux Institute of onCology, University of Bordeaux","place":["Bordeaux, France"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"235","reference":[{"key":"e_1_3_5_2_2","doi-asserted-by":"publisher","DOI":"10.3390\/pathogens13060475"},{"key":"e_1_3_5_3_2","unstructured":"The European Union One Health 2022 Zoonoses Report. 2023. 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