{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,1]],"date-time":"2026-07-01T17:07:21Z","timestamp":1782925641272,"version":"3.54.5"},"reference-count":89,"publisher":"American Society for Microbiology","issue":"22","license":[{"start":{"date-parts":[[2021,10,28]],"date-time":"2021-10-28T00:00:00Z","timestamp":1635379200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/doi.org\/10.1128\/ASMCopyrightv2"},{"start":{"date-parts":[[2021,10,28]],"date-time":"2021-10-28T00:00:00Z","timestamp":1635379200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.asm.org\/non-commercial-tdm-license"}],"funder":[{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["31570500"],"award-info":[{"award-number":["31570500"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["31870111"],"award-info":[{"award-number":["31870111"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["40930212"],"award-info":[{"award-number":["40930212"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["journals.asm.org"],"crossmark-restriction":true},"short-container-title":["Appl Environ Microbiol"],"published-print":{"date-parts":[[2021,10,28]]},"abstract":"<jats:p>A wide array of archaea populate Earth\u2019s extreme environments; therefore, they may play important roles in mediating biogeochemical processes such as iron and sulfur cycling. However, our knowledge of archaeal biology and evolution is still limited considering that the majority of the archaeal diversity is uncultured.<\/jats:p>","DOI":"10.1128\/aem.01065-21","type":"journal-article","created":{"date-parts":[[2021,9,15]],"date-time":"2021-09-15T17:05:37Z","timestamp":1631725537000},"update-policy":"https:\/\/doi.org\/10.1128\/asmj-crossmark-policy-page","source":"Crossref","is-referenced-by-count":12,"title":["Genomic Insights into the Ecological Role and Evolution of a Novel\n            <i>Thermoplasmata<\/i>\n            Order, \u201c\n            <i>Candidatus<\/i>\n            Sysuiplasmatales\u201d"],"prefix":"10.1128","volume":"87","author":[{"given":"Yang","family":"Yuan","sequence":"first","affiliation":[{"name":"School of Life Sciences, Sun Yat-sen University, Guangzhou, People\u2019s Republic of China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jun","family":"Liu","sequence":"additional","affiliation":[{"name":"State Key Laboratory of Agricultural Microbiology, College of Resources and Environment, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tao-Tao","family":"Yang","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Sun Yat-sen University, Guangzhou, People\u2019s Republic of China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Shao-Ming","family":"Gao","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Sun Yat-sen University, Guangzhou, People\u2019s Republic of China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Bin","family":"Liao","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Sun Yat-sen University, Guangzhou, People\u2019s Republic of China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4881-7920","authenticated-orcid":true,"given":"Li-Nan","family":"Huang","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Sun Yat-sen University, Guangzhou, People\u2019s Republic of China"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"235","reference":[{"key":"e_1_3_3_2_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0708857105"},{"key":"e_1_3_3_3_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41396-017-0002-z"},{"key":"e_1_3_3_4_2","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2011.78"},{"key":"e_1_3_3_5_2","doi-asserted-by":"publisher","DOI":"10.1038\/35054051"},{"key":"e_1_3_3_6_2","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2015.233"},{"key":"e_1_3_3_7_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1462-2920.2008.01613.x"},{"key":"e_1_3_3_8_2","doi-asserted-by":"publisher","DOI":"10.1126\/science.aaf3883"},{"key":"e_1_3_3_9_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41564-020-0715-z"},{"key":"e_1_3_3_10_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41579-020-00458-8"},{"key":"e_1_3_3_11_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.cell.2018.02.016"},{"key":"e_1_3_3_12_2","doi-asserted-by":"publisher","DOI":"10.1111\/1462-2920.15349"},{"key":"e_1_3_3_13_2","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2017.122"},{"key":"e_1_3_3_14_2","doi-asserted-by":"publisher","DOI":"10.1099\/ijsem.0.000725"},{"key":"e_1_3_3_15_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1462-2920.2005.00861.x"},{"key":"e_1_3_3_16_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41564-018-0168-9"},{"key":"e_1_3_3_17_2","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2017.162"},{"key":"e_1_3_3_18_2","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2009.158"},{"key":"e_1_3_3_19_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.tim.2016.03.004"},{"key":"e_1_3_3_20_2","doi-asserted-by":"publisher","DOI":"10.1126\/science.1132690"},{"key":"e_1_3_3_21_2","doi-asserted-by":"publisher","DOI":"10.1016\/S0168-6496(03)00028-X"},{"key":"e_1_3_3_22_2","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2017.113"},{"key":"e_1_3_3_23_2","doi-asserted-by":"publisher","DOI":"10.1016\/S1003-6326(14)63474-9"},{"key":"e_1_3_3_24_2","doi-asserted-by":"publisher","DOI":"10.1111\/gbi.12041"},{"key":"e_1_3_3_25_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1574-6968.2011.02267.x"},{"key":"e_1_3_3_26_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41564-020-0733-x"},{"key":"e_1_3_3_27_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0903355106"},{"key":"e_1_3_3_28_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1716667115"},{"key":"e_1_3_3_29_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0806798106"},{"key":"e_1_3_3_30_2","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.65.1.319-321.1999"},{"key":"e_1_3_3_31_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.jmb.2003.10.072"},{"key":"e_1_3_3_32_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0904165106"},{"key":"e_1_3_3_33_2","doi-asserted-by":"publisher","DOI":"10.1089\/ars.2011.4051"},{"key":"e_1_3_3_34_2","doi-asserted-by":"publisher","DOI":"10.1007\/s00775-014-1188-4"},{"key":"e_1_3_3_35_2","doi-asserted-by":"publisher","DOI":"10.1111\/1462-2920.15316"},{"key":"e_1_3_3_36_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.resmic.2010.10.003"},{"key":"e_1_3_3_37_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1821004116"},{"key":"e_1_3_3_38_2","doi-asserted-by":"publisher","DOI":"10.1038\/srep39737"},{"key":"e_1_3_3_39_2","doi-asserted-by":"publisher","DOI":"10.1038\/nature12033"},{"key":"e_1_3_3_40_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.cub.2015.01.014"},{"key":"e_1_3_3_41_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.00612-10"},{"key":"e_1_3_3_42_2","doi-asserted-by":"publisher","DOI":"10.1038\/ncomms3120"},{"key":"e_1_3_3_43_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.bbabio.2010.10.017"},{"key":"e_1_3_3_44_2","doi-asserted-by":"publisher","DOI":"10.1128\/mBio.02285-16"},{"key":"e_1_3_3_45_2","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.03057-12"},{"key":"e_1_3_3_46_2","doi-asserted-by":"publisher","DOI":"10.1093\/femsle\/fnw057"},{"key":"e_1_3_3_47_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41579-018-0136-7"},{"key":"e_1_3_3_48_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41564-019-0363-3"},{"key":"e_1_3_3_49_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41396-019-0415-y"},{"key":"e_1_3_3_50_2","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2014.212"},{"key":"e_1_3_3_51_2","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2014.245"},{"key":"e_1_3_3_52_2","doi-asserted-by":"publisher","DOI":"10.21775\/9781910190333.04"},{"key":"e_1_3_3_53_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.183.1.101-108.2001"},{"key":"e_1_3_3_54_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.186.23.7888-7895.2004"},{"key":"e_1_3_3_55_2","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.02473-10"},{"key":"e_1_3_3_56_2","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.00726-11"},{"key":"e_1_3_3_57_2","doi-asserted-by":"publisher","DOI":"10.14494\/jnrs2000.6.39"},{"key":"e_1_3_3_58_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1574-6976.2000.tb00567.x"},{"key":"e_1_3_3_59_2","doi-asserted-by":"publisher","DOI":"10.1093\/femsre\/fuaa063"},{"key":"e_1_3_3_60_2","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.71.10.6319-6324.2005"},{"key":"e_1_3_3_61_2","doi-asserted-by":"publisher","DOI":"10.1038\/nature13805"},{"key":"e_1_3_3_62_2","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msp123"},{"key":"e_1_3_3_63_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.soilbio.2017.07.004"},{"key":"e_1_3_3_64_2","doi-asserted-by":"publisher","DOI":"10.1186\/s40168-020-00848-3"},{"key":"e_1_3_3_65_2","doi-asserted-by":"publisher","DOI":"10.1016\/S0923-2508(03)00114-1"},{"key":"e_1_3_3_66_2","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2012.139"},{"key":"e_1_3_3_67_2","doi-asserted-by":"publisher","DOI":"10.1007\/s00792-008-0171-9"},{"key":"e_1_3_3_68_2","unstructured":"Joshi NA Fass JN. 2011. Sickle: a sliding-window adaptive quality-based trimming tool for FastQ files. https:\/\/githubcom\/najoshi\/sickle."},{"key":"e_1_3_3_69_2","doi-asserted-by":"publisher","DOI":"10.7717\/peerj.1165"},{"key":"e_1_3_3_70_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv638"},{"key":"e_1_3_3_71_2","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.3103"},{"key":"e_1_3_3_72_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41564-018-0171-1"},{"key":"e_1_3_3_73_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btz848"},{"key":"e_1_3_3_74_2","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msu300"},{"key":"e_1_3_3_75_2","unstructured":"Bushnell B. 2014. BBmap: a fast accurate splice-aware aligner. Ernest Orlando Lawrence Berkeley National Laboratory."},{"key":"e_1_3_3_76_2","doi-asserted-by":"publisher","DOI":"10.1101\/gr.186072.114"},{"key":"e_1_3_3_77_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41564-019-0449-y"},{"key":"e_1_3_3_78_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bts079"},{"key":"e_1_3_3_79_2","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.3176"},{"key":"e_1_3_3_80_2","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gky418"},{"key":"e_1_3_3_81_2","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkw413"},{"key":"e_1_3_3_82_2","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gki442"},{"key":"e_1_3_3_83_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp348"},{"key":"e_1_3_3_84_2","doi-asserted-by":"publisher","DOI":"10.1186\/2049-2618-1-22"},{"key":"e_1_3_3_85_2","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkh340"},{"key":"e_1_3_3_86_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btl529"},{"key":"e_1_3_3_87_2","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.4229"},{"key":"e_1_3_3_88_2","doi-asserted-by":"publisher","DOI":"10.1007\/s10482-017-0844-4"},{"key":"e_1_3_3_89_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-018-05284-4"},{"key":"e_1_3_3_90_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btq315"}],"container-title":["Applied and Environmental Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/AEM.01065-21","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/AEM.01065-21","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,2,23]],"date-time":"2022-02-23T21:28:27Z","timestamp":1645651707000},"score":1,"resource":{"primary":{"URL":"https:\/\/journals.asm.org\/doi\/10.1128\/AEM.01065-21"}},"subtitle":[],"editor":[{"given":"Robert M.","family":"Kelly","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"editor"}]}],"short-title":[],"issued":{"date-parts":[[2021,10,28]]},"references-count":89,"journal-issue":{"issue":"22","published-print":{"date-parts":[[2021,10,28]]}},"alternative-id":["10.1128\/AEM.01065-21"],"URL":"https:\/\/doi.org\/10.1128\/aem.01065-21","relation":{},"ISSN":["0099-2240","1098-5336"],"issn-type":[{"value":"0099-2240","type":"print"},{"value":"1098-5336","type":"electronic"}],"subject":[],"published":{"date-parts":[[2021,10,28]]},"assertion":[{"value":"2021-05-30","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2021-09-01","order":1,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2021-10-28","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}],"article-number":"e01065-21"}}