{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,1,23]],"date-time":"2026-01-23T08:34:55Z","timestamp":1769157295060,"version":"3.49.0"},"reference-count":46,"publisher":"American Society for Microbiology","issue":"10","license":[{"start":{"date-parts":[[2021,4,21]],"date-time":"2021-04-21T00:00:00Z","timestamp":1618963200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2021,4,21]],"date-time":"2021-04-21T00:00:00Z","timestamp":1618963200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.asm.org\/non-commercial-tdm-license"}],"funder":[{"DOI":"10.13039\/100000997","name":"Arnold and Mabel Beckman Foundation","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100000997","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100001082","name":"Camille and Henry Dreyfus Foundation","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100001082","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000060","name":"HHS | NIH | National Institute of Allergy and Infectious Diseases","doi-asserted-by":"publisher","award":["090606"],"award-info":[{"award-number":["090606"]}],"id":[{"id":"10.13039\/100000060","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000001","name":"National Science Foundation","doi-asserted-by":"publisher","award":["1716794"],"award-info":[{"award-number":["1716794"]}],"id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["journals.asm.org"],"crossmark-restriction":true},"short-container-title":["J Bacteriol"],"published-print":{"date-parts":[[2021,4,21]]},"abstract":"<jats:p>\n            <jats:named-content content-type=\"genus-species\">Vibrio cholerae<\/jats:named-content>\n            is the causative agent of cholera disease. While current treatments of care are accessible, we still lack an understanding of the molecular mechanisms that allow\n            <jats:named-content content-type=\"genus-species\">V. cholerae<\/jats:named-content>\n            to survive in both aquatic reservoirs and the human small intestine, where pathogenesis occurs.\n          <\/jats:p>","DOI":"10.1128\/jb.00044-21","type":"journal-article","created":{"date-parts":[[2021,3,2]],"date-time":"2021-03-02T14:14:02Z","timestamp":1614694442000},"update-policy":"https:\/\/doi.org\/10.1128\/asmj-crossmark-policy-page","source":"Crossref","is-referenced-by-count":2,"title":["Cra and cAMP Receptor Protein Have Opposing Roles in the Regulation of\n            <i>fruB<\/i>\n            in Vibrio cholerae"],"prefix":"10.1128","volume":"203","author":[{"given":"Christina","family":"Beck","sequence":"first","affiliation":[{"name":"Department of Chemistry, Pomona College, Claremont, California, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sayde","family":"Perry","sequence":"additional","affiliation":[{"name":"Department of Chemistry, Pomona College, Claremont, California, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9461-7567","authenticated-orcid":true,"given":"Daniel M.","family":"Stoebel","sequence":"additional","affiliation":[{"name":"Department of Biology, Harvey Mudd College, Claremont, California, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4743-6827","authenticated-orcid":true,"given":"Jane M.","family":"Liu","sequence":"additional","affiliation":[{"name":"Department of Chemistry, Pomona College, Claremont, California, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"235","reference":[{"key":"e_1_3_3_2_2","doi-asserted-by":"publisher","DOI":"10.1016\/S0140-6736(12)60436-X"},{"key":"e_1_3_3_3_2","doi-asserted-by":"publisher","DOI":"10.1128\/CMR.8.1.48-86.1995"},{"key":"e_1_3_3_4_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.vaccine.2019.07.078"},{"key":"e_1_3_3_5_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pntd.0003832"},{"key":"e_1_3_3_6_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pntd.0004330"},{"key":"e_1_3_3_7_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1348-0421.2002.tb02659.x"},{"key":"e_1_3_3_8_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.01356-09"},{"key":"e_1_3_3_9_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.jmb.2017.02.006"},{"key":"e_1_3_3_10_2","doi-asserted-by":"publisher","DOI":"10.1128\/MMBR.00024-06"},{"key":"e_1_3_3_11_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.00213-10"},{"key":"e_1_3_3_12_2","doi-asserted-by":"publisher","DOI":"10.1111\/mmi.13646"},{"key":"e_1_3_3_13_2","doi-asserted-by":"publisher","DOI":"10.1038\/35020000"},{"key":"e_1_3_3_14_2","doi-asserted-by":"publisher","DOI":"10.1111\/1758-2229.12685"},{"key":"e_1_3_3_15_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2011.07.007"},{"key":"e_1_3_3_16_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.85.23.8998"},{"key":"e_1_3_3_17_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1500203112"},{"key":"e_1_3_3_18_2","first-page":"61","volume-title":"Metagenomics and its applications in agriculture, biomedicine, and environmental studies.","author":"Solovyev V","year":"2011","unstructured":"Solovyev V, Salamov A. 2011. Automatic annotation of microbial genomes and metagenomic sequences, p 61\u201378. In Li RW (ed), Metagenomics and its applications in agriculture, biomedicine, and environmental studies. Nova Science Publishers, Hauppage, NY."},{"key":"e_1_3_3_19_2","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkp911"},{"key":"e_1_3_3_20_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.mib.2008.02.007"},{"key":"e_1_3_3_21_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2958.1995.tb02339.x"},{"key":"e_1_3_3_22_2","doi-asserted-by":"publisher","DOI":"10.1006\/jmbi.1993.1561"},{"key":"e_1_3_3_23_2","doi-asserted-by":"publisher","DOI":"10.1128\/jb.178.12.3411-3417.1996"},{"key":"e_1_3_3_24_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2443.2005.00888.x"},{"key":"e_1_3_3_25_2","doi-asserted-by":"publisher","DOI":"10.4236\/abb.2013.43A063"},{"key":"e_1_3_3_26_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0020081"},{"key":"e_1_3_3_27_2","doi-asserted-by":"publisher","DOI":"10.1128\/jb.172.9.5459-5469.1990"},{"key":"e_1_3_3_28_2","doi-asserted-by":"publisher","DOI":"10.1139\/cjm-2013-0084"},{"key":"e_1_3_3_29_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.00466-08"},{"key":"e_1_3_3_30_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.01214-10"},{"key":"e_1_3_3_31_2","doi-asserted-by":"publisher","DOI":"10.1038\/nrmicro787"},{"key":"e_1_3_3_32_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bti635"},{"key":"e_1_3_3_33_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1462-2920.2012.02808.x"},{"key":"e_1_3_3_34_2","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkp080"},{"key":"e_1_3_3_35_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.cell.2009.01.043"},{"key":"e_1_3_3_36_2","doi-asserted-by":"publisher","DOI":"10.1146\/annurev.micro.61.080706.093440"},{"key":"e_1_3_3_37_2","doi-asserted-by":"publisher","DOI":"10.1038\/nrmicro2930"},{"key":"e_1_3_3_38_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2958.2007.05796.x"},{"key":"e_1_3_3_39_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1004175"},{"key":"e_1_3_3_40_2","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkab013"},{"key":"e_1_3_3_41_2","doi-asserted-by":"publisher","DOI":"10.1099\/mic.0.000559"},{"key":"e_1_3_3_42_2","doi-asserted-by":"publisher","DOI":"10.1111\/mmi.14008"},{"key":"e_1_3_3_43_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.00178-19"},{"key":"e_1_3_3_44_2","unstructured":"Li H. 2013. Aligning sequence reads clone sequences and assembly contigs with BWA-MEM. ArXiv 1303.3997. https:\/\/arxiv.org\/abs\/1303.3997."},{"key":"e_1_3_3_45_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btu638"},{"key":"e_1_3_3_46_2","volume-title":"R: a language and environment for statistical computing.","author":"R Core Team.","year":"2020","unstructured":"R Core Team. 2020. R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria."},{"key":"e_1_3_3_47_2","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-014-0550-8"}],"updated-by":[{"DOI":"10.1128\/jb.00241-21","type":"correction","label":"Correction","source":"publisher","updated":{"date-parts":[[2021,8,20]],"date-time":"2021-08-20T00:00:00Z","timestamp":1629417600000}}],"container-title":["Journal of Bacteriology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/JB.00044-21","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/JB.00044-21","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,7,29]],"date-time":"2021-07-29T17:58:37Z","timestamp":1627581517000},"score":1,"resource":{"primary":{"URL":"https:\/\/journals.asm.org\/doi\/10.1128\/JB.00044-21"}},"subtitle":[],"editor":[{"given":"Conrad W.","family":"Mullineaux","sequence":"additional","affiliation":[],"role":[{"role":"editor","vocabulary":"crossref"}]}],"short-title":[],"issued":{"date-parts":[[2021,4,21]]},"references-count":46,"journal-issue":{"issue":"10","published-print":{"date-parts":[[2021,4,21]]}},"alternative-id":["10.1128\/JB.00044-21"],"URL":"https:\/\/doi.org\/10.1128\/jb.00044-21","relation":{"correction":[{"id-type":"doi","id":"10.1128\/JB.00241-21","asserted-by":"object"}]},"ISSN":["0021-9193","1098-5530"],"issn-type":[{"value":"0021-9193","type":"print"},{"value":"1098-5530","type":"electronic"}],"subject":[],"published":{"date-parts":[[2021,4,21]]},"assertion":[{"value":"2021-01-25","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2021-02-23","order":1,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2021-04-21","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}