{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,13]],"date-time":"2026-10-13T07:21:14Z","timestamp":1791876074060,"version":"4.3.4"},"reference-count":142,"publisher":"American Society for Microbiology","issue":"3","license":[{"start":{"date-parts":[[2010,2,1]],"date-time":"2010-02-01T00:00:00Z","timestamp":1264982400000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.asm.org\/non-commercial-tdm-license"}],"content-domain":{"domain":["journals.asm.org"],"crossmark-restriction":true},"short-container-title":["J Bacteriol"],"published-print":{"date-parts":[[2010,2]]},"abstract":"<jats:title>ABSTRACT<\/jats:title>\n          <jats:p>\n            <jats:italic>Micrococcus luteus<\/jats:italic>\n            (NCTC2665, \u201cFleming strain\u201d) has one of the smallest genomes of free-living actinobacteria sequenced to date, comprising a single circular chromosome of 2,501,097 bp (G+C content, 73%) predicted to encode 2,403 proteins. The genome shows extensive synteny with that of the closely related organism,\n            <jats:italic>Kocuria rhizophila<\/jats:italic>\n            , from which it was taxonomically separated relatively recently. Despite its small size, the genome harbors 73 insertion sequence (IS) elements, almost all of which are closely related to elements found in other actinobacteria. An IS element is inserted into the\n            <jats:italic>rrs<\/jats:italic>\n            gene of one of only two\n            <jats:italic>rrn<\/jats:italic>\n            operons found in\n            <jats:italic>M. luteus<\/jats:italic>\n            . The genome encodes only four sigma factors and 14 response regulators, a finding indicative of adaptation to a rather strict ecological niche (mammalian skin). The high sensitivity of\n            <jats:italic>M. luteus<\/jats:italic>\n            to \u03b2-lactam antibiotics may result from the presence of a reduced set of penicillin-binding proteins and the absence of a\n            <jats:italic>wblC<\/jats:italic>\n            gene, which plays an important role in the antibiotic resistance in other actinobacteria. Consistent with the restricted range of compounds it can use as a sole source of carbon for energy and growth,\n            <jats:italic>M. luteus<\/jats:italic>\n            has a minimal complement of genes concerned with carbohydrate transport and metabolism and its inability to utilize glucose as a sole carbon source may be due to the apparent absence of a gene encoding glucokinase. Uniquely among characterized bacteria,\n            <jats:italic>M. luteus<\/jats:italic>\n            appears to be able to metabolize glycogen only via trehalose and to make trehalose only via glycogen. It has very few genes associated with secondary metabolism. In contrast to most other actinobacteria,\n            <jats:italic>M. luteus<\/jats:italic>\n            encodes only one resuscitation-promoting factor (Rpf) required for emergence from dormancy, and its complement of other dormancy-related proteins is also much reduced.\n            <jats:italic>M. luteus<\/jats:italic>\n            is capable of long-chain alkene biosynthesis, which is of interest for advanced biofuel production; a three-gene cluster essential for this metabolism has been identified in the genome.\n          <\/jats:p>","DOI":"10.1128\/jb.01254-09","type":"journal-article","created":{"date-parts":[[2009,12,1]],"date-time":"2009-12-01T02:34:12Z","timestamp":1259634852000},"page":"841-860","update-policy":"https:\/\/doi.org\/10.1128\/asmj-crossmark-policy-page","source":"Crossref","is-referenced-by-count":81,"title":["Genome Sequence of the Fleming Strain of\n            <i>Micrococcus luteus<\/i>\n            , a Simple Free-Living Actinobacterium"],"prefix":"10.1128","volume":"192","author":[{"given":"Michael","family":"Young","sequence":"first","affiliation":[{"name":"Institute of Biological Environmental and Rural Sciences, Aberystwyth University, Aberystwyth, Ceredigion SY23 3DD, United Kingdom"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Vladislav","family":"Artsatbanov","sequence":"additional","affiliation":[{"name":"Bah Institute of Biochemistry, Leninsky Pr. 33, Moscow 119071, Russia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Harry R.","family":"Beller","sequence":"additional","affiliation":[{"name":"Joint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, California"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Govind","family":"Chandra","sequence":"additional","affiliation":[{"name":"John Innes Centre, Norwich NR4 7UH, United Kingdom"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Keith F.","family":"Chater","sequence":"additional","affiliation":[{"name":"John Innes Centre, Norwich NR4 7UH, United Kingdom"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lynn G.","family":"Dover","sequence":"additional","affiliation":[{"name":"Biomolecular and Biomedical Research Centre, School of Applied Sciences, Northumbria University, Newcastle upon Tyne NE1 8ST, United Kingdom"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ee-Been","family":"Goh","sequence":"additional","affiliation":[{"name":"Joint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, California"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tamar","family":"Kahan","sequence":"additional","affiliation":[{"name":"Bioinformatics Unit, Faculty of Medicine, The Hebrew University of Jerusalem, Ein Kerem, Jerusalem, Israel"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Arseny S.","family":"Kaprelyants","sequence":"additional","affiliation":[{"name":"Bah Institute of Biochemistry, Leninsky Pr. 33, Moscow 119071, Russia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Nikos","family":"Kyrpides","sequence":"additional","affiliation":[{"name":"DOE-Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, California 94958"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Alla","family":"Lapidus","sequence":"additional","affiliation":[{"name":"DOE-Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, California 94958"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Stephen R.","family":"Lowry","sequence":"additional","affiliation":[{"name":"DOE-Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, California 94958"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Athanasios","family":"Lykidis","sequence":"additional","affiliation":[{"name":"DOE-Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, California 94958"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jacques","family":"Mahillon","sequence":"additional","affiliation":[{"name":"Laboratory of Food and Environmental Microbiology, Universite\u0301 Catholique de Louvain, B-1348 Louvain-la-Neuve, Belgium"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Victor","family":"Markowitz","sequence":"additional","affiliation":[{"name":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Konstantinos","family":"Mavromatis","sequence":"additional","affiliation":[{"name":"DOE-Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, California 94958"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Galina V.","family":"Mukamolova","sequence":"additional","affiliation":[{"name":"Department of Infection, Immunity and Inflammation, University of Leicester, P.O. 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