{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,30]],"date-time":"2026-09-30T06:21:40Z","timestamp":1790749300541,"version":"4.1.0"},"reference-count":39,"publisher":"American Society for Microbiology","issue":"24","license":[{"start":{"date-parts":[[2021,11,23]],"date-time":"2021-11-23T00:00:00Z","timestamp":1637625600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2021,11,23]],"date-time":"2021-11-23T00:00:00Z","timestamp":1637625600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.asm.org\/non-commercial-tdm-license"}],"content-domain":{"domain":["journals.asm.org"],"crossmark-restriction":true},"short-container-title":["J Virol"],"published-print":{"date-parts":[[2021,11,23]]},"abstract":"<jats:p>The 2019 coronavirus disease (COVID-19) pandemic has significantly altered the circulation patterns of respiratory diseases worldwide and disrupted continued surveillance in many countries. Introduction of control measures in early 2020 against Severe Acute Respiratory Syndrome Coronavirus-2 (SARS-CoV-2) infection has resulted in a remarkable reduction in the circulation of many respiratory diseases.<\/jats:p>","DOI":"10.1128\/jvi.01267-21","type":"journal-article","created":{"date-parts":[[2021,9,29]],"date-time":"2021-09-29T16:03:05Z","timestamp":1632931385000},"update-policy":"https:\/\/doi.org\/10.1128\/asmj-crossmark-policy-page","source":"Crossref","is-referenced-by-count":19,"title":["Genetic and Antigenic Characterization of an Influenza A(H3N2) Outbreak in Cambodia and the Greater Mekong Subregion during the COVID-19 Pandemic, 2020"],"prefix":"10.1128","volume":"95","author":[{"given":"Jurre Y.","family":"Siegers","sequence":"first","affiliation":[{"name":"National Influenza Center of Cambodia, Virology Unit, Institut Pasteur du Cambodge, Phnom Penh, Cambodia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Vijaykrishna","family":"Dhanasekaran","sequence":"additional","affiliation":[{"name":"School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong, China"},{"name":"HKU-Pasteur Research Pole, School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ruopeng","family":"Xie","sequence":"additional","affiliation":[{"name":"School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong, China"},{"name":"HKU-Pasteur Research Pole, School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yi-Mo","family":"Deng","sequence":"additional","affiliation":[{"name":"World Health Organization Collaborating Center, Victorian Infectious Diseases Reference Laboratory, Peter Doherty Institute for Infection and Immunity, Melbourne, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sarika","family":"Patel","sequence":"additional","affiliation":[{"name":"World Health Organization Country Office, Phnom Penh, Cambodia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Vanra","family":"Ieng","sequence":"additional","affiliation":[{"name":"World Health Organization Country Office, Phnom Penh, Cambodia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jean","family":"Moselen","sequence":"additional","affiliation":[{"name":"World Health Organization Collaborating Center, Victorian Infectious Diseases Reference Laboratory, Peter Doherty Institute for Infection and Immunity, Melbourne, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Heidi","family":"Peck","sequence":"additional","affiliation":[{"name":"World Health Organization Collaborating Center, Victorian Infectious Diseases Reference Laboratory, Peter Doherty Institute for Infection and Immunity, Melbourne, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ammar","family":"Aziz","sequence":"additional","affiliation":[{"name":"World Health Organization Collaborating Center, Victorian Infectious Diseases Reference Laboratory, Peter Doherty Institute for Infection and Immunity, Melbourne, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Borann","family":"Sarr","sequence":"additional","affiliation":[{"name":"U.S. Centers for Disease Control and Prevention, Phnom Penh, Cambodia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Savuth","family":"Chin","sequence":"additional","affiliation":[{"name":"National Institute of Public Health, Ministry of Health, Phnom Penh, Cambodia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Seng","family":"Heng","sequence":"additional","affiliation":[{"name":"Centers for Disease Control and Prevention, Ministry of Health, Phnom Penh, Cambodia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Asheena","family":"Khalakdina","sequence":"additional","affiliation":[{"name":"World Health Organization Country Office, Phnom Penh, Cambodia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Michael","family":"Kinzer","sequence":"additional","affiliation":[{"name":"U.S. Centers for Disease Control and Prevention, Phnom Penh, Cambodia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Darapheak","family":"Chau","sequence":"additional","affiliation":[{"name":"National Institute of Public Health, Ministry of Health, Phnom Penh, Cambodia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Philomena","family":"Raftery","sequence":"additional","affiliation":[{"name":"World Health Organization Country Office, Phnom Penh, Cambodia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0353-1678","authenticated-orcid":true,"given":"Veasna","family":"Duong","sequence":"additional","affiliation":[{"name":"National Influenza Center of Cambodia, Virology Unit, Institut Pasteur du Cambodge, Phnom Penh, Cambodia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ly","family":"Sovann","sequence":"additional","affiliation":[{"name":"Centers for Disease Control and Prevention, Ministry of Health, Phnom Penh, Cambodia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ian G.","family":"Barr","sequence":"additional","affiliation":[{"name":"World Health Organization Collaborating Center, Victorian Infectious Diseases Reference Laboratory, Peter Doherty Institute for Infection and Immunity, Melbourne, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6004-5671","authenticated-orcid":true,"given":"Erik A.","family":"Karlsson","sequence":"additional","affiliation":[{"name":"National Influenza Center of Cambodia, Virology Unit, Institut Pasteur du Cambodge, Phnom Penh, Cambodia"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"235","reference":[{"key":"e_1_3_3_2_2","doi-asserted-by":"publisher","DOI":"10.1016\/S0140-6736(17)33293-2"},{"key":"e_1_3_3_3_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1003194"},{"key":"e_1_3_3_4_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pmed.0030089"},{"key":"e_1_3_3_5_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41591-018-0340-z"},{"key":"e_1_3_3_6_2","first-page":"Doc04","article-title":"Influenza viruses\u2014antiviral therapy and resistance","volume":"5","author":"Duwe S","year":"2017","unstructured":"Duwe S. 2017. Influenza viruses\u2014antiviral therapy and resistance. GMS Infect Dis 5:Doc04.","journal-title":"GMS Infect Dis"},{"key":"e_1_3_3_7_2","doi-asserted-by":"publisher","DOI":"10.1093\/infdis\/jiaa179"},{"key":"e_1_3_3_8_2","doi-asserted-by":"publisher","DOI":"10.1111\/irv.12565"},{"key":"e_1_3_3_9_2","doi-asserted-by":"publisher","DOI":"10.1002\/ppul.24933"},{"key":"e_1_3_3_10_2","doi-asserted-by":"publisher","DOI":"10.2807\/1560-7917.ES.2020.25.47.2001847"},{"key":"e_1_3_3_11_2","doi-asserted-by":"publisher","DOI":"10.1093\/cid\/ciaa1475"},{"key":"e_1_3_3_12_2","doi-asserted-by":"publisher","DOI":"10.15585\/mmwr.mm6937a6"},{"key":"e_1_3_3_13_2","doi-asserted-by":"publisher","DOI":"10.1101\/2020.11.11.20228692"},{"key":"e_1_3_3_14_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.ijid.2020.11.178"},{"key":"e_1_3_3_15_2","doi-asserted-by":"publisher","DOI":"10.1111\/irv.12844"},{"key":"e_1_3_3_16_2","unstructured":"World Health Organization. 2021. Recommended composition of influenza virus vaccines for use in the 2021\u20132022 northern hemisphere influenza season. https:\/\/www.who.int\/influenza\/vaccines\/virus\/recommendations\/202102_recommendation.pdf. Accessed April 2001."},{"key":"e_1_3_3_17_2","doi-asserted-by":"publisher","DOI":"10.1111\/irv.12647"},{"key":"e_1_3_3_18_2","doi-asserted-by":"publisher","DOI":"10.2807\/1560-7917.ES.2020.25.3.2000045"},{"key":"e_1_3_3_19_2","unstructured":"World Health Organization. Maintaining surveillance of influenza and monitoring SARS-CoV-2 \u2013 adapting Global Influenza surveillance and Response System (GISRS) and sentinel systems during the COVID-19 pandemic. 2020. https:\/\/www.who.int\/publications\/i\/item\/maintaining-surveillance-of-influenza-and-monitoring-sars-cov-2-adapting-global-influenza-surveillance-and-response-system-(gisrs)-and-sentinel-systems-during-the-covid-19-pandemic. Accessed April 2001."},{"key":"e_1_3_3_20_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41562-021-01079-8"},{"key":"e_1_3_3_21_2","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.01109-09"},{"key":"e_1_3_3_22_2","doi-asserted-by":"publisher","DOI":"10.1186\/s12864-016-3138-8"},{"key":"e_1_3_3_23_2","doi-asserted-by":"publisher","DOI":"10.2807\/1560-7917.ES.2017.22.13.30494"},{"key":"e_1_3_3_24_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bty407"},{"key":"e_1_3_3_25_2","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkh340"},{"key":"e_1_3_3_26_2","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msaa015"},{"key":"e_1_3_3_27_2","doi-asserted-by":"publisher","DOI":"10.1093\/sysbio\/syv068"},{"key":"e_1_3_3_28_2","doi-asserted-by":"publisher","DOI":"10.1093\/ve\/vew007"},{"key":"e_1_3_3_29_2","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msx281"},{"key":"e_1_3_3_30_2","volume-title":"Manual for the laboratory diagnosis and virological surveillance of influenza.","author":"World Health Organization","year":"2011","unstructured":"World Health Organization. 2011. Manual for the laboratory diagnosis and virological surveillance of influenza. World Health Organization, Geneva, Switzerland."},{"key":"e_1_3_3_31_2","doi-asserted-by":"publisher","DOI":"10.1128\/jvi.77.15.8418-8425.2003"},{"key":"e_1_3_3_32_2","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.00458-10"},{"key":"e_1_3_3_33_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1006682"},{"key":"e_1_3_3_34_2","first-page":"301","volume-title":"Influenza pathogenesis and control\u2014volume II.","author":"Krammer F","year":"2015","unstructured":"Krammer F, Palese P, Steel J. 2015.Advances in universal influenza virus vaccine design and antibody mediated therapies based on conserved regions of the hemagglutinin, p. 301\u2013321, In Oldstone MBA, Compans RW (ed), Influenza pathogenesis and control\u2014volume II. Springer International Publishing, Cham, Switzerland."},{"key":"e_1_3_3_35_2","doi-asserted-by":"publisher","DOI":"10.1126\/science.1244730"},{"key":"e_1_3_3_36_2","doi-asserted-by":"publisher","DOI":"10.1126\/science.1097211"},{"key":"e_1_3_3_37_2","unstructured":"World Health Organization. 2020. Statement on the second meeting of the International Health Regulations (2005) Emergency Committee regarding the outbreak of novel coronavirus (2019-nCoV). https:\/\/www.who.int\/news\/item\/30-01-2020-statement-on-the-second-meeting-of-the-international-health-regulations-(2005)-emergency-committee-regarding-the-outbreak-of-novel-coronavirus-(2019-ncov). Accessed April 2021."},{"key":"e_1_3_3_38_2","unstructured":"World Health Organization. 2020. WHO Director-General's opening remarks at the media briefing on COVID-19\u201411 March 2020. https:\/\/www.who.int\/director-general\/speeches\/detail\/who-director-general-s-opening-remarks-at-the-media-briefing-on-covid-19---11-march-2020. Accessed 22 April 2021."},{"key":"e_1_3_3_39_2","doi-asserted-by":"publisher","DOI":"10.12688\/wellcomeopenres.15808.1"},{"key":"e_1_3_3_40_2","doi-asserted-by":"publisher","DOI":"10.1038\/nature14460"}],"container-title":["Journal of Virology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/JVI.01267-21","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/JVI.01267-21","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,3,5]],"date-time":"2022-03-05T16:31:52Z","timestamp":1646497912000},"score":1,"resource":{"primary":{"URL":"https:\/\/journals.asm.org\/doi\/10.1128\/JVI.01267-21"}},"subtitle":[],"editor":[{"given":"Mark T.","family":"Heise","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"editor"}]}],"short-title":[],"issued":{"date-parts":[[2021,11,23]]},"references-count":39,"journal-issue":{"issue":"24","published-print":{"date-parts":[[2021,11,23]]}},"alternative-id":["10.1128\/JVI.01267-21"],"URL":"https:\/\/doi.org\/10.1128\/jvi.01267-21","relation":{},"ISSN":["0022-538X","1098-5514"],"issn-type":[{"value":"0022-538X","type":"print"},{"value":"1098-5514","type":"electronic"}],"subject":[],"published":{"date-parts":[[2021,11,23]]},"assertion":[{"value":"2021-07-29","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2021-09-09","order":1,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2021-11-23","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}],"article-number":"e01267-21"}}