{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,2]],"date-time":"2026-09-02T05:54:22Z","timestamp":1788328462189,"version":"build-2803163510"},"reference-count":116,"publisher":"American Society for Microbiology","issue":"9","license":[{"start":{"date-parts":[[2025,9,10]],"date-time":"2025-09-10T00:00:00Z","timestamp":1757462400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2025,9,10]],"date-time":"2025-09-10T00:00:00Z","timestamp":1757462400000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.asm.org\/non-commercial-tdm-license"}],"funder":[{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["R01AI110964"],"award-info":[{"award-number":["R01AI110964"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["U01AI151797"],"award-info":[{"award-number":["U01AI151797"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000200","name":"United States Agency for International Development","doi-asserted-by":"publisher","award":["PREDICT"],"award-info":[{"award-number":["PREDICT"]}],"id":[{"id":"10.13039\/100000200","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["31830096"],"award-info":[{"award-number":["31830096"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["32361133556"],"award-info":[{"award-number":["32361133556"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100002367","name":"Chinese Academy of Sciences","doi-asserted-by":"publisher","award":["KJZD-SW-L11"],"award-info":[{"award-number":["KJZD-SW-L11"]}],"id":[{"id":"10.13039\/501100002367","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["journals.asm.org"],"crossmark-restriction":true},"short-container-title":["mBio"],"published-print":{"date-parts":[[2025,9,10]]},"abstract":"<jats:title>ABSTRACT<\/jats:title>\n                  <jats:sec>\n                    <jats:title\/>\n                    <jats:p>\n                      Bats are the reservoir hosts of emerging coronaviruses (CoVs) affecting human and livestock health. We assessed the diversity, evolution, and geographic distribution of two alphacoronaviruses (subgenus\n                      <jats:italic toggle=\"yes\">Rhinacovirus<\/jats:italic>\n                      ) with considerable potential for emergence: swine acute diarrhea syndrome coronavirus (SADS-CoV), which has caused large outbreaks in pigs in China and can infect primary human airway epithelial cells\n                      <jats:italic toggle=\"yes\">in vitro<\/jats:italic>\n                      ; and the related\n                      <jats:italic toggle=\"yes\">Rhinolophus bat coronavirus HKU2<\/jats:italic>\n                      (HKU2-CoV). Phylogenetic analyses of 523 rhinacovirus sequences from bats in China and Southeast Asia suggest these viruses should be reclassified into at least two distinct CoV species representing two well-supported monophyletic clades. Stronger phylogenetic clustering by sampling location than by host species suggests infrequent long-distance transmission of rhinacoviruses in southern China. Ancestral state reconstruction analysis indicates that\n                      <jats:italic toggle=\"yes\">R. sinicus\/thomasi<\/jats:italic>\n                      and\n                      <jats:italic toggle=\"yes\">R. affinis<\/jats:italic>\n                      have played an important role in rhinacovirus evolution in southern China and that\n                      <jats:italic toggle=\"yes\">R. affinis<\/jats:italic>\n                      is the likely reservoir host of SADS-CoV that spilled over into pigs. We used species distribution modeling of\n                      <jats:italic toggle=\"yes\">Rhinolophus<\/jats:italic>\n                      spp. bat hosts of rhinacoviruses, combined with pig and human density data, to identify potential geographic rhinacovirus spillover risk in Southeast Asia. Areas of high pig density within suitable bat habitat exist primarily in southern China and northern Vietnam, and hotspots of the highest human density within suitable bat habitat are primarily along the southern coast of China, Java, and central Thailand. Targeted surveillance of pigs and people in these regions may facilitate the timely detection of bat CoV spillover events and mitigate the risk of future outbreaks.\n                    <\/jats:p>\n                    <jats:sec>\n                      <jats:title>IMPORTANCE<\/jats:title>\n                      <jats:p>\n                        Bats are the reservoir or ancestral hosts of important emerging coronaviruses affecting people (e.g., SARS-CoV and SARS-CoV-2) and livestock (e.g., PEDV, SADS-CoV). Here, we analyzed 523 genetic sequences of SADS-CoV that caused large-scale die-offs of pigs in China, which is known to be able to infect human cells and related HKU2-CoVs. We used this information to identify the horseshoe bat\n                        <jats:italic toggle=\"yes\">Rhinolophus affinis<\/jats:italic>\n                        as the likely spillover host for the outbreak in pigs, and identified the bat species within which these viruses evolved. We then modeled the distribution of these host species and their overlap with dense human and pig populations to identify the regions where surveillance programs can help identify spillover events and prevent future outbreaks.\n                      <\/jats:p>\n                    <\/jats:sec>\n                  <\/jats:sec>","DOI":"10.1128\/mbio.01197-24","type":"journal-article","created":{"date-parts":[[2025,8,19]],"date-time":"2025-08-19T13:00:11Z","timestamp":1755608411000},"update-policy":"https:\/\/doi.org\/10.1128\/asmj-crossmark-policy-page","source":"Crossref","is-referenced-by-count":3,"title":["Diversity and spillover risk of swine acute diarrhea syndrome and related coronaviruses in China and Southeast Asia"],"prefix":"10.1128","volume":"16","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-1249-2025","authenticated-orcid":true,"given":"Alice","family":"Latinne","sequence":"first","affiliation":[{"id":[{"id":"https:\/\/ror.org\/02zv3m156","id-type":"ROR","asserted-by":"publisher"}],"name":"EcoHealth Alliance","place":["New York, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Li-Biao","family":"Zhang","sequence":"additional","affiliation":[{"name":"Guangdong Key Laboratory of Animal Conservation and Resource Utilization, Guangdong Public Laboratory of Wild Animal Conservation and Utilization, Institute of Zoology, Guangdong Academy of Sciences","place":["Guangzhou, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-2040-8973","authenticated-orcid":true,"given":"Cadhla","family":"Firth","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/02zv3m156","id-type":"ROR","asserted-by":"publisher"}],"name":"EcoHealth Alliance","place":["New York, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Guangjian","family":"Zhu","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/02zv3m156","id-type":"ROR","asserted-by":"publisher"}],"name":"EcoHealth Alliance","place":["New York, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Kevin J.","family":"Olival","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/02zv3m156","id-type":"ROR","asserted-by":"publisher"}],"name":"EcoHealth Alliance","place":["New York, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1141-6816","authenticated-orcid":true,"given":"Cecilia A.","family":"S\u00e1nchez","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/02zv3m156","id-type":"ROR","asserted-by":"publisher"}],"name":"EcoHealth Alliance","place":["New York, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Shirley","family":"Chen","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/02zv3m156","id-type":"ROR","asserted-by":"publisher"}],"name":"EcoHealth Alliance","place":["New York, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Noam","family":"Ross","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/02zv3m156","id-type":"ROR","asserted-by":"publisher"}],"name":"EcoHealth Alliance","place":["New York, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Hongying","family":"Li","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/02zv3m156","id-type":"ROR","asserted-by":"publisher"}],"name":"EcoHealth Alliance","place":["New York, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-5544-0431","authenticated-orcid":true,"given":"Aleksei A.","family":"Chmura","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/02zv3m156","id-type":"ROR","asserted-by":"publisher"}],"name":"EcoHealth Alliance","place":["New York, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-2046-5695","authenticated-orcid":true,"given":"Peter","family":"Daszak","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/02zv3m156","id-type":"ROR","asserted-by":"publisher"}],"name":"EcoHealth Alliance","place":["New York, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"235","reference":[{"key":"e_1_3_3_2_2","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.01394-09"},{"key":"e_1_3_3_3_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.tim.2016.03.003"},{"key":"e_1_3_3_4_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41579-018-0118-9"},{"key":"e_1_3_3_5_2","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.01755-15"},{"key":"e_1_3_3_6_2","first-page":"163","volume-title":"Advances in Virus Research","author":"Corman VM","year":"2018","unstructured":"Corman VM, Muth D, Niemeyer D, Drosten C. 2018. Chapter eight - hosts and sources of endemic human coronaviruses, p 163\u2013188. In Kielian M, Mettenleiter TC, Roossinck MJ (ed), Advances in Virus Research. Vol. 100. Academic Press."},{"key":"e_1_3_3_7_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.cell.2021.06.008"},{"key":"e_1_3_3_8_2","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.00906-12"},{"key":"e_1_3_3_9_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-020-17687-3"},{"key":"e_1_3_3_10_2","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.02420-14"},{"key":"e_1_3_3_11_2","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.02675-05"},{"key":"e_1_3_3_12_2","doi-asserted-by":"publisher","DOI":"10.1186\/s12985-015-0432-z"},{"key":"e_1_3_3_13_2","doi-asserted-by":"publisher","DOI":"10.1186\/s12917-019-1800-5"},{"key":"e_1_3_3_14_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0096084"},{"key":"e_1_3_3_15_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0133381"},{"key":"e_1_3_3_16_2","doi-asserted-by":"publisher","DOI":"10.1136\/vr.103950"},{"key":"e_1_3_3_17_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.vetmic.2020.108693"},{"key":"e_1_3_3_18_2","doi-asserted-by":"publisher","DOI":"10.3201\/eid2309.170915"},{"key":"e_1_3_3_19_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.vetmic.2017.09.020"},{"key":"e_1_3_3_20_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.meegid.2018.04.031"},{"key":"e_1_3_3_21_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41586-018-0010-9"},{"key":"e_1_3_3_22_2","doi-asserted-by":"publisher","DOI":"10.1111\/tbed.13008"},{"key":"e_1_3_3_23_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.virol.2006.02.041"},{"key":"e_1_3_3_24_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.virol.2007.06.009"},{"key":"e_1_3_3_25_2","doi-asserted-by":"publisher","DOI":"10.1186\/s12985-015-0289-1"},{"key":"e_1_3_3_26_2","doi-asserted-by":"publisher","DOI":"10.3390\/v16071114"},{"key":"e_1_3_3_27_2","doi-asserted-by":"publisher","DOI":"10.3390\/life11080820"},{"key":"e_1_3_3_28_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-020-16876-4"},{"key":"e_1_3_3_29_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.virusres.2020.198024"},{"key":"e_1_3_3_30_2","doi-asserted-by":"publisher","DOI":"10.1128\/MRA.01259-18"},{"key":"e_1_3_3_31_2","doi-asserted-by":"publisher","DOI":"10.1111\/tbed.13270"},{"key":"e_1_3_3_32_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.jinf.2022.08.020"},{"key":"e_1_3_3_33_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.vetmic.2024.110049"},{"key":"e_1_3_3_34_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.2001046117"},{"key":"e_1_3_3_35_2","doi-asserted-by":"publisher","DOI":"10.1007\/s12250-020-00321-3"},{"key":"e_1_3_3_36_2","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.01448-19"},{"key":"e_1_3_3_37_2","doi-asserted-by":"publisher","DOI":"10.1128\/jvi.00065-22"},{"key":"e_1_3_3_38_2","doi-asserted-by":"publisher","DOI":"10.3201\/eid1608.100208"},{"key":"e_1_3_3_39_2","doi-asserted-by":"publisher","DOI":"10.1007\/BF02515385"},{"key":"e_1_3_3_40_2","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkh340"},{"key":"e_1_3_3_41_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.ympev.2019.106551"},{"key":"e_1_3_3_42_2","doi-asserted-by":"publisher","DOI":"10.1515\/MAMM.2009.022"},{"key":"e_1_3_3_43_2","unstructured":"Khan FAA. 2008. Diversification of old world bats in Malaysia: an evolutionary and phylogeography hypothesis tested through the genetic species concept Texas Tech University"},{"key":"e_1_3_3_44_2","first-page":"281","article-title":"Phylogenetic analysis of the Malaysian Rhinolophus and Hipposideros inferred from partial mitochondrial DNA cytochrome b gene sequences","volume":"34","author":"Sazali S","year":"2011","unstructured":"Sazali S, Besar K, Abdullah M. 2011. Phylogenetic analysis of the Malaysian Rhinolophus and Hipposideros inferred from partial mitochondrial DNA cytochrome b gene sequences. Pertanika J Trop Agric Sci 34:281\u2013294.","journal-title":"Pertanika J Trop Agric Sci"},{"key":"e_1_3_3_45_2","doi-asserted-by":"publisher","DOI":"10.1093\/sysbio\/sys029"},{"key":"e_1_3_3_46_2","doi-asserted-by":"publisher","DOI":"10.1093\/oxfordjournals.molbev.a026036"},{"key":"e_1_3_3_47_2","doi-asserted-by":"publisher","DOI":"10.1111\/2041-210X.12410"},{"key":"e_1_3_3_48_2","doi-asserted-by":"publisher","DOI":"10.1093\/sysbio\/syq010"},{"key":"e_1_3_3_49_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.meegid.2007.08.001"},{"key":"e_1_3_3_50_2","doi-asserted-by":"publisher","DOI":"10.1146\/annurev.ecolsys.33.010802.150448"},{"key":"e_1_3_3_51_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btq166"},{"key":"e_1_3_3_52_2","doi-asserted-by":"publisher","DOI":"10.1080\/10635150490522232"},{"key":"e_1_3_3_53_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-022-31860-w"},{"key":"e_1_3_3_54_2","unstructured":"R Core Team. 2022. R: a language and environment for statistical computing. R Foundation for Statistical Computing Vienna Austria."},{"key":"e_1_3_3_55_2","unstructured":"GBIF. 2023. GBIF Occurrence Download. GBIF.Org. Available from: https:\/\/www.gbif.org\/"},{"key":"e_1_3_3_56_2","doi-asserted-by":"publisher","DOI":"10.7287\/peerj.preprints.3304v1"},{"key":"e_1_3_3_57_2","unstructured":"Chamberlain S et al.. 2022. Rgbif: Interface to the global biodiversity information facility API R package version 3.7.0. https:\/\/CRAN.R-project.org\/package=rgbif."},{"key":"e_1_3_3_58_2","doi-asserted-by":"crossref","unstructured":"Tanalgo K et al.. 2022. Metadata for: DarkCideS 1.0 a global database for bats in karsts and caves. figshare","DOI":"10.22541\/au.163578759.92395202\/v1"},{"key":"e_1_3_3_59_2","unstructured":"Consortium P. 2021. PREDICT Animals Sampled 2. Dataset. USAID Development Data Library. Available from: https:\/\/data.usaid.gov\/d\/m2kn-w8j5"},{"key":"e_1_3_3_60_2","doi-asserted-by":"publisher","DOI":"10.1186\/s40555-015-0109-8"},{"key":"e_1_3_3_61_2","doi-asserted-by":"publisher","DOI":"10.5281\/zenodo.13419985"},{"key":"e_1_3_3_62_2","unstructured":"Lim LS. 2012. Assemblage and genetic structure of insectivorous bats in Peninsular Malaysia School of Biological and Chemical Sciences Queen Mary University of London United Kingdom"},{"key":"e_1_3_3_63_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0056786"},{"key":"e_1_3_3_64_2","doi-asserted-by":"publisher","DOI":"10.3161\/150811008X414818"},{"key":"e_1_3_3_65_2","doi-asserted-by":"publisher","DOI":"10.3390\/v15091897"},{"key":"e_1_3_3_66_2","doi-asserted-by":"publisher","DOI":"10.3161\/150811009X465703"},{"key":"e_1_3_3_67_2","doi-asserted-by":"publisher","DOI":"10.1111\/2041-210X.13152"},{"key":"e_1_3_3_68_2","unstructured":"Hijmans RJ. 2023. Terra: Spatial Data Analysis. R package version 1.7-46. https:\/\/cran.r-project.org\/web\/packages\/terra\/index.html."},{"key":"e_1_3_3_69_2","doi-asserted-by":"publisher","DOI":"10.1002\/joc.5086"},{"key":"e_1_3_3_70_2","doi-asserted-by":"publisher","unstructured":"Friedl M Sulla-Menashe D. 2022. MODIS\/Terra+Aqua land cover type yearly L3 global 0.05Deg CMG V061. NASA Land Processes Distributed Active Archive Center. doi:10.5067\/MODIS\/MCD12C1.061","DOI":"10.5067\/MODIS\/MCD12C1.061"},{"key":"e_1_3_3_71_2","doi-asserted-by":"publisher","DOI":"10.1007\/s10040-016-1519-3"},{"key":"e_1_3_3_72_2","doi-asserted-by":"publisher","DOI":"10.7927\/H4F47M65"},{"key":"e_1_3_3_73_2","doi-asserted-by":"publisher","DOI":"10.3390\/rs13050922"},{"key":"e_1_3_3_74_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.cageo.2016.07.003"},{"key":"e_1_3_3_75_2","unstructured":"Wu Q Brown A. 2022. Whitebox: \u201cWhiteboxTools\u201d R Frontend. R package version 2.2.0. https:\/\/search.r-project.org\/CRAN\/refmans\/whitebox\/html\/whitebox-package.html."},{"key":"e_1_3_3_76_2","unstructured":"Warren D Dinnage R. 2022. R package version 1.0.6. ENMTools: analysis of niche evolution using niche and distribution models. Available from: https:\/\/CRAN.R-project.org\/package=ENMTools"},{"key":"e_1_3_3_77_2","doi-asserted-by":"publisher","DOI":"10.1111\/2041-210X.12372"},{"key":"e_1_3_3_78_2","doi-asserted-by":"publisher","DOI":"10.1111\/2041-210X.13107"},{"key":"e_1_3_3_79_2","doi-asserted-by":"publisher","DOI":"10.1111\/ecog.03049"},{"key":"e_1_3_3_80_2","doi-asserted-by":"publisher","DOI":"10.1111\/2041-210X.13628"},{"key":"e_1_3_3_81_2","doi-asserted-by":"publisher","DOI":"10.1111\/2041-210X.13628"},{"key":"e_1_3_3_82_2","doi-asserted-by":"publisher","DOI":"10.1111\/jbi.12227"},{"key":"e_1_3_3_83_2","doi-asserted-by":"publisher","DOI":"10.1111\/ecog.04886"},{"key":"e_1_3_3_84_2","unstructured":"Phillips SJ. 2021. A Brief Tutorial on Maxent. https:\/\/biodiversityinformatics.amnh.org\/open_source\/maxent\/Maxent_tutorial_2021.pdf."},{"key":"e_1_3_3_85_2","unstructured":"IUCN. 2021. The IUCN Red List of Threatened Species. https:\/\/www.iucnredlist.org."},{"key":"e_1_3_3_86_2","unstructured":"Gilbert M et al.. 2018. Global Pigs Distribution in 2010. Harvard Dataverse. https:\/\/dataverse.harvard.edu\/dataset.xhtml?persistentId=doi:10.7910\/DVN\/CIVCPB."},{"key":"e_1_3_3_87_2","doi-asserted-by":"publisher","DOI":"10.1038\/sdata.2018.227"},{"key":"e_1_3_3_88_2","doi-asserted-by":"publisher","DOI":"10.1038\/nrmicro.2017.45"},{"key":"e_1_3_3_89_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.2202871119"},{"key":"e_1_3_3_90_2","doi-asserted-by":"publisher","DOI":"10.1093\/ve\/vex012"},{"key":"e_1_3_3_91_2","doi-asserted-by":"publisher","DOI":"10.3390\/v11040379"},{"key":"e_1_3_3_92_2","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.00631-14"},{"key":"e_1_3_3_93_2","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2019.01900"},{"key":"e_1_3_3_94_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.virol.2017.03.019"},{"key":"e_1_3_3_95_2","doi-asserted-by":"publisher","DOI":"10.3390\/v13101962"},{"key":"e_1_3_3_96_2","doi-asserted-by":"publisher","DOI":"10.1093\/ve\/veac054"},{"key":"e_1_3_3_97_2","doi-asserted-by":"publisher","DOI":"10.1093\/gbe\/evac018"},{"key":"e_1_3_3_98_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0237129"},{"key":"e_1_3_3_99_2","doi-asserted-by":"publisher","DOI":"10.1007\/s00248-019-01391-x"},{"key":"e_1_3_3_100_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0149237"},{"key":"e_1_3_3_101_2","doi-asserted-by":"publisher","DOI":"10.1128\/JCM.01875-17"},{"key":"e_1_3_3_102_2","doi-asserted-by":"publisher","DOI":"10.1006\/viro.2001.0893"},{"key":"e_1_3_3_103_2","unstructured":"Fukui D. 2019. Rhinolophus pusillus. The IUCN Red List of Threatened Species 2019: e.T85707059A21994916. The IUCN Red List of Threatened Species. https:\/\/www.iucnredlist.org\/species\/85707059\/21994916."},{"key":"e_1_3_3_104_2","unstructured":"Sun K. 2019. Rhinolophus sinicus. The IUCN Red List of Threatened Species 2019 e.T41529A22005184. The IUCN Red List of Threatened Species. https:\/\/www.iucnredlist.org\/species\/41529\/22005184."},{"key":"e_1_3_3_105_2","unstructured":"Furey N et al.. 2020. Rhinolophus shameli. The IUCN Red List of Threatened Species 2020 e.T19566A21993823. The IUCN Red List of Threatened Species:https:\/\/www.iucnredlist.org\/species\/19566\/21993823."},{"key":"e_1_3_3_106_2","unstructured":"Furey N Walston J Kingston T Hutson AM. 2020. Rhinolophus affinis. The IUCN Red List of Threatened Species 2020 e.T19522A21982358. The IUCN Red List of Threatened Species:https:\/\/www.iucnredlist.org\/species\/19522\/21982358."},{"key":"e_1_3_3_107_2","unstructured":"Tu V Csorba G Srinivasulu C. 2019. Rhinolophus macrotis. The IUCN Red List of Threatened Species 2019 e.T19550A21978583. The IUCN Red List of Threatened Species:https:\/\/www.iucnredlist.org\/species\/19550\/21978583."},{"key":"e_1_3_3_108_2","doi-asserted-by":"publisher","DOI":"10.1242\/jeb.203950"},{"key":"e_1_3_3_109_2","first-page":"268","volume-title":"Evolutionary and ecological correlates of population genetic structure in bats. Evolutionary History of Bats. Fossils, Molecules and Morphology","author":"Olival K","year":"2012","unstructured":"Olival K. 2012. Evolutionary and ecological correlates of population genetic structure in bats. Evolutionary History of Bats. Fossils, Molecules and Morphology, p 268\u2013316. Cambridge University Press, New York, USA."},{"key":"e_1_3_3_110_2","doi-asserted-by":"publisher","DOI":"10.3390\/d9030035"},{"key":"e_1_3_3_111_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.cub.2020.05.023"},{"key":"e_1_3_3_112_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41586-020-2012-7"},{"key":"e_1_3_3_113_2","doi-asserted-by":"publisher","unstructured":"Temmam S et al.. 2021. Coronaviruses with a SARS-CoV-2-like receptor-binding domain allowing ACE2-mediated entry into human cells isolated from bats of Indochinese peninsula. Research Square. doi:10.21203\/rs.3.rs-871965\/v1","DOI":"10.21203\/rs.3.rs-871965\/v1"},{"key":"e_1_3_3_114_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-021-21240-1"},{"key":"e_1_3_3_115_2","unstructured":"Schwartz K et al.. 2013. Infective material concepts and procedures for intentional sow herd exposure to Porcine Epidemic Diarrhea virus. American Association of Swine Veterinarians. https:\/\/www.aasv.org\/wp-content\/uploads\/2024\/05\/Schwartz-et-al-2013-FS.pdf."},{"key":"e_1_3_3_116_2","doi-asserted-by":"publisher","DOI":"10.54846\/jshap\/941"},{"key":"e_1_3_3_117_2","doi-asserted-by":"publisher","DOI":"10.1186\/s13567-015-0285-x"}],"container-title":["mBio"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/mbio.01197-24","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/mbio.01197-24","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,9,10]],"date-time":"2025-09-10T13:02:36Z","timestamp":1757509356000},"score":1,"resource":{"primary":{"URL":"https:\/\/journals.asm.org\/doi\/10.1128\/mbio.01197-24"}},"subtitle":[],"editor":[{"given":"Michael S.","family":"Diamond","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"editor"}]},{"given":"Cara E.","family":"Brook","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"editor"}]}],"short-title":[],"issued":{"date-parts":[[2025,9,10]]},"references-count":116,"journal-issue":{"issue":"9","published-print":{"date-parts":[[2025,9,10]]}},"alternative-id":["10.1128\/mbio.01197-24"],"URL":"https:\/\/doi.org\/10.1128\/mbio.01197-24","relation":{},"ISSN":["2150-7511"],"issn-type":[{"value":"2150-7511","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025,9,10]]},"assertion":[{"value":"2024-05-10","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2025-06-16","order":2,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2025-08-19","order":3,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}],"article-number":"e01197-24"}}